Bos indicus (zebu cattle): 109573464
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Entry
109573464 CDS
T04792
Symbol
HCRT
Name
(RefSeq) orexin
KO
K05246
hypocretin (orexin) neuropeptide
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04080
Neuroactive ligand-receptor interaction
biu04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109573464 (HCRT)
04081 Hormone signaling
109573464 (HCRT)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
biu04052
]
109573464 (HCRT)
Cytokines and neuropeptides [BR:
biu04052
]
Neuropeptides
GPCR binding
109573464 (HCRT)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orexin
Motif
Other DBs
NCBI-GeneID:
109573464
NCBI-ProteinID:
XP_019836258
UniProt:
A0A6P5DDF0
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Position
19:complement(43635964..43638187)
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AA seq
131 aa
AA seq
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MNPSSTKVSWATVTLLLLLLLLPPALLSPGAAAQPLPDCCRQKTCSCRLYELLHGAGNHA
AGILTLGKRRPGPPGLQGRLQRLLQASGNHAAGILXXXXXXXXXXXXRPCSGRRCPSEAA
SSVAPGGRSGV
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atgaatccttcctctacaaaggtctcctgggccaccgtgacgctgctgctcctgctactg
ttgctgccccccgcgctgctgtcacctggggcggccgcgcagcccctgcccgactgctgc
cgtcagaagacgtgctcctgccgcctctacgagctgctgcacggagcgggcaatcacgcg
gccggcatcctcacgctgggcaagcggcggccggggcccccgggtctccagggccggctg
cagcgcctcctgcaggccagcggcaaccacgcggcaggcatcctnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnngcgcccctgctccggccgccggtgtccctctgaggccgcc
tcgtccgtggctcctgggggacggtccggggtctga
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