Bos indicus (zebu cattle): 109573506
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Entry
109573506 CDS
T04792
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1 isoform X1
KO
K24318
scavenger receptor class F member 1
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109573506 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
biu04131
]
109573506 (SCARF1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
biu04990
]
109573506 (SCARF1)
Membrane trafficking [BR:
biu04131
]
Endocytosis
Phagocytosis
Scavenger receptors
109573506 (SCARF1)
Domain-containing proteins not elsewhere classified [BR:
biu04990
]
Laminin domain-containing proteins
Laminin EGF-like domain-containing proteins
109573506 (SCARF1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
EGF_2
Motif
Other DBs
NCBI-GeneID:
109573506
NCBI-ProteinID:
XP_019836301
UniProt:
A0A6P5DDI4
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Position
19:complement(22828786..22839991)
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AA seq
932 aa
AA seq
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MDSHGSPARLSWDPELTASSSCRLQIQTSPEASXQPSPLAFPFPFTILVSASQRLPTVSG
RCLMAARPSSLVSSGKAWGGSRKGVGRCGGQTDPSPPAALAAMGPGLLFPLLLLEALGAP
GSELDAGGRHVCKASSPSAELQCCPGWRRKDRECTIPICEGLDACREDEVCVKPGLCRCK
PGFFGAQCNSRCPGQYWGPDCREVCACHPHGQCEPATGVCHCQPDRWGDRCEFPCACGPH
GRCNPETGACRCXXXXXSPTCRRPCQCNPAAARCDQATGSCLCEPGWWGRRCSFRCACHG
SPCAQESGRCACRPGWWGPECRQPCECVRGRCSAVSGQCSCPPGFQGVRCELPCPAGQYG
LRCRDSCGHCKQNKPCSADTGSCEACKPGWNGTQCHQPCPPGTFGENCSQQCPHCRLGEA
CQPDTGHCQRCEPGWRGPRCEDPCLIGTFGEGCGSTCPTCVQGACDAVTGECVCNAGYWG
PSCNTSCPSGFHGNNCSVPCECPEGNCDPVSGACQLGSHSQDAALIAGILVPLLLLLLAI
ACCACCCWAARLDPKDRPVRDGTAMSRMKLRVWGALTSSLGSALPCGPLSSHKLPWVTVS
HHDPEIPFNHSFIEPPSAGWASDDSFSSDSESGEEDEGPAYCVPPQEGMVPAVPAESSEA
SLAGXPFPPPEDASTPFAIPRTSSLARAKRPSVSFAEGTKFAPQSRRGSGELSSPLRKPK
RLSRGTQPGPESQETEESTGPQVETDGAPPGTASPRDSAVGRRRLPLGGRTVAERVEAIE
GSVQESSGSVTTIYMLAGTPRGPEGPVRSVLRRFGSFQKGQAEPKVKSAIPKPPRRALSR
NKDSPRLDSGSANQSPSSAMKEELTGALESSGTGSEEGARSLGGGIKSSEGGQELAPEDG
SLVQDPQKVADKEGQEEPQYENVVPISGPLEP
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggattcccatggctcacccgctcgcctgtcctgggatccggaacttacagcctcatct
tcctgccggctccagattcagaccagcccagaagcctctrctcagccctcaccattggcc
ttcccttttcctttcactattctggtgtctgcatctcagcgcctgcccactgtctcaggg
aggtgcctcatggcagcccgcccctctagcctggtttcctcaggaaaagcctggggagga
agtaggaagggggttgggcgctgtgggggccagactgacccaagccctcccgctgcactg
gccgccatggggccggggctgctgttccctctgttgctgctcgaggctctgggggcccca
gggtctgagctggacgccggggggcggcacgtctgcaaggccagcagtccctctgctgag
ctccagtgctgcccaggctggaggcggaaagatcgagaatgcaccatccccatctgcgag
gggctggatgcctgccgggaagacgaggtatgtgtgaaaccaggcctctgtcggtgcaaa
cctggattcttyggagcccagtgcaactcccgctgcccgggccagtactggggccccgac
tgcagggaggtctgcgcctgccacccgcacggccagtgcgaaccggccaccggcgtgtgc
cactgccaacctgaccgmtggggcgaccgctgcgagtttccgtgcgcctgcggtccccac
ggccgctgcaaccccgagaccggcgcatgccgctgcgannnnnnnnnnnnntcgcccacg
tgccgccgcccgtgccagtgcaaccccgcggcggcgcggtgcgatcaggccaccggctcc
tgcctgtgcgagccaggctggtggggccgccgctgcagcttccgctgcgcctgccacggc
tcgccgtgcgcgcaggagtcgggccgctgcgcctgccggccgggctggtggggccccgag
tgccgacagccgtgcgagtgcgtgcgcggccgctgcagcgctgtctccggccagtgctcc
tgcccgcccggcttccaaggcgtgcgttgcgagctgccctgccccgccggccagtacggg
ctccggtgccgcgacagctgtggccactgcaagcagaataagccgtgctctgcagacaca
ggcagctgcgaggcctgcaagccgggctggaacgggacccagtgccatcagccctgccct
cctggcacctttggcgagaactgtagccagcagtgcccccactgccggcttggagaggcc
tgtcagccagacaccggtcactgtcagcgctgtgagcctggctggcgggggcccaggtgt
gaagacccctgcctgattggcacctttggggagggttgcggctctacctgccccacctgt
gtccagggggcctgtgatgctgtgacaggggagtgtgtctgcaacgctggctactggggg
cccagctgcaatacttcgtgtccatctggcttccatggaaacaactgctctgttccctgc
gaatgtccagagggaaactgcgaccctgtctctggggcctgccagctgggatcgcatagt
caggacgctgccctcattgcgggcatcctcgttcctctgctgctgctgctcctggccatc
gcctgctgtgcctgctgctgctgggctgcccggctggaccccaaggacaggccggtgaga
gatggaaccgccatgtccaggatgaagctgcgggtctggggggccctgacctccagcctg
ggctctgcactgccctgtggtcccctgagcagccacaagcttccctgggtgacagtctcg
caccacgacccggagatccccttcaaccacagcttcatcgagccgccctccgctggctgg
gcttcggacgactccttctcttcggattccgagtctggagaagaggatgagggtcctgcc
tattgcgtgccaccccaagaagggatggtccctgcggtcccagcggaatcctcagaggcc
agcctggctggargtcccttccctccccctgaggatgcctccacgccgtttgccatcccg
cgcacttccagcctcgctagggccaagcggccatcagtctcctttgctgaaggcaccaag
ttcgcaccacagagtcgccgaggctccggggagctgtccagccctctccgaaagcccaag
aggctctcccgggggacccagccaggtcctgaaagccaggagactgaggagtccacaggc
cctcaagtggaaacagatggggcccctcctggtactgccagccccagggattcagctgtt
ggtcgccgccggctcccacttggtggccggacagtggctgagcgtgtggaagccatcgag
ggcagtgtccaggaaagctcaggctctgtcaccacgatctacatgttggcagggacaccc
cggggacctgagggccccgtccggtctgtcctccgccgttttggtagcttccagaaaggc
caggcagaacccaaggtcaagagtgccattcctaagcctccacgtcgggccctgagtcgg
aacaaggacagccccaggctagactctggctctgccaatcagagccccagctcagccatg
aaggaggagctgactggggccttggagtcttcagggactgggtcagaggaaggggccagg
agcctggggggcggcatcaagagctcagagggtggccaggagctggcccctgaggatggc
tccctagtacaggatccccagaaggtggctgacaaggaagggcaggaagagccccagtat
gaaaatgtcgtacccatctctgggccactggaaccctga
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