Bos indicus (zebu cattle): 109573510
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Entry
109573510 CDS
T04792
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03040
Spliceosome
biu05202
Transcriptional misregulation in cancer
biu05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109573510 (DDX5)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
109573510 (DDX5)
05205 Proteoglycans in cancer
109573510 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
biu03041
]
109573510 (DDX5)
03009 Ribosome biogenesis [BR:
biu03009
]
109573510 (DDX5)
Enzymes [BR:
biu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109573510 (DDX5)
Spliceosome [BR:
biu03041
]
Complex A
U1 snRNP components
U1 related factors
109573510 (DDX5)
Complex B
109573510 (DDX5)
Ribosome biogenesis [BR:
biu03009
]
Eukaryotic type
Pre-60S particles
Helicases
109573510 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
109573510
NCBI-ProteinID:
XP_019836306
UniProt:
A0A6P5DDI8
LinkDB
All DBs
Position
19:complement(50219452..50226010)
Genome browser
AA seq
614 aa
AA seq
DB search
MSGYSSDRDRGRDRGFGAPRFGGSRAGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQ
EHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI
QAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELA
QQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLR
RTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHI
NIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRK
MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS
GRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTQNGVYSAANY
TNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGSNVPNMHNGMNQQAYAYPATAA
APMIGYPMPTGYSQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggttattcgagtgaccgagaccgtggccgggatcgagggtttggtgctcctcga
tttggaggtagtagggcagggcccttatctggaaagaagtttggaaatcctggagagaaa
ctggttaaaaagaagtggaatcttgatgagctgcctaagtttgagaagaatttttatcaa
gaacaccccgatttggctaggcgtacagcacaagaggtagagacatacagaagaagcaag
gaaattacagttagaggtcataattgcccgaagccagtcctgaatttttatgaggcaaac
ttccctgcaaatgtcatggacgtgattgcaaggcagaacttcactgaacccacagctatt
caagctcagggatggccagttgctctaagtggattggatatggttggggtagcacaaact
ggatctgggaagactttgtcttatttgctgcctgccattgtccacatcaatcatcagcca
ttcctagagagaggtgatgggcctatttgcttggtgctggcacctactcgggaactggcc
caacaggtacagcaagtagctgctgaatactgtagagcatgtcgcttgaagtctacttgc
atttatggcggtgctcccaagggaccacaaatacgtgatttggaaagaggtgtggaaatc
tgtattgcaacacctggaagactgatagactttttagaatgtgggaaaaccaatctaaga
agaaccacctaccttgtccttgatgaagcagatagaatgcttgatatggggtttgaaccc
caaataaggaagattgtggaccagatcagacctgacaggcaaaccctaatgtggagtgct
acttggccaaaagaagtaagacagcttgctgaagatttcctgaaagactatattcatata
aacattggtgcactagaactgagtgcaaatcacaacattcttcagattgtggatgtgtgt
catgacgtagaaaaggatgaaaagcttattcgtctaatggaagagatcatgagtgaaaag
gagaacaaaaccattgtttttgttgaaaccaaaagaagatgtgatgaactcactagaaaa
atgaggagagatgggtggcctgccatgggtatccatggtgacaagagtcaacaggaacgt
gactgggttctaaatgaattcaaacatggaaaggctcctattctgattgctactgatgtg
gcctccagagggctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaac
tcctcagaggattatattcatcgaattggaagaactgctcgcagtaccaaaacaggcaca
gcatacactttctttacacctaataacataaagcaagtgagcgaccttatctctgtgctt
cgggaagctaatcaagcaattaatcctaagttgcttcagttggtcgaagacagaggttca
ggtcgttccaggggtagaggaggcatgaaggatgaccggcgggacagatactctgcgggc
aagaggggtggatttaatacatttagagacagggaaaattatgaccgcggttactctagt
ctgcttaagagagattttggggcaaaaactcagaatggtgtttacagtgctgcaaattac
accaatgggagctttggaagtaattttgtgtctgctggtatacagaccagttttaggact
ggtaatccaacagggacttaccagaacggttatgatagcactcagcaatatggaagtaac
gttccaaatatgcacaatggtatgaaccaacaggcatatgcatatcctgctactgcagct
gcgcctatgattggttatccgatgccaacaggatattctcaataa
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