KEGG   Bos indicus (zebu cattle): 109573616
Entry
109573616         CDS       T04792                                 
Symbol
PER1
Name
(RefSeq) period circadian protein homolog 1
  KO
K21944  period circadian protein 1
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu04710  Circadian rhythm
biu04713  Circadian entrainment
Brite
KEGG Orthology (KO) [BR:biu00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    109573616 (PER1)
   04713 Circadian entrainment
    109573616 (PER1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:biu03400]
    109573616 (PER1)
DNA repair and recombination proteins [BR:biu03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    109573616 (PER1)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 109573616
NCBI-ProteinID: XP_019836449
UniProt: A0A6P5DFN1
LinkDB
Position
19:complement(28322252..28337449)
AA seq 1284 aa
MSRSGPLEGAEGGGDPRPGEPFCPGGGPSPGPPEHRPCPGPSLADDTDANSNGSSGNESN
GPESRGASQRSSHSSSSGNGKDSALLETTESSKSTNSQSPSPPSSSIAYSLLSASSEPDN
PSTSGCSSEQSARARTQKELMTALRELKLRLPPERRGKGRSGTLATLQYALACVKQVQAN
QEFYQQWSLEEGEPCAMDMSTYTLEELEHVTSEYTLRNQDTFSVAVSFLTGRIVYISEQA
GVLLRCKRDVFRGARFSELLAPQDVGVFYGSTTPSRLPTWGPGTSAGSGLKDFTQEKSVF
CRIRGGPDRDPGPRYQPFRLTPYVTKIRVSDGAPAQPCCLLIAERIHSGYEAPRIPPDKR
IFTTRHTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLXGQ
PFDHSPIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPLNEDVFTPPVPSP
ALSLDSDIQELSEQIHRLLLQPVHSPSPTGLCGVGPVPSSGPLLSPGSSSDSNGGDAEGP
GPPAPVTFQQICKDVHLVKHQGQQLFIESRARPLPRPRVPATGTFKAKTLPCQSPDLEAA
PAPIQAPVALAAEDAERKEASSCSYQQINCLDSILRYLESCNLPSTAKRKCASSSSCTAS
SASDDDXQRAGPVSVGAKKDPSAVLPGEGATPLKEPVVGGGALSPLALANKAESVVSITS
QCSFSSTIVHVGDKKPPESDIIMMEDLPSLPPGPAPSPAPSPTVAPDPAPDAYRPVGLTK
AVLSLHTQKEEQAFLSRFRDFSRLRGLDSSSTAPSAPGERGCHHSLAIPGRRHHCRSKAK
RSRHHQTTRAEAPGYISQPSPVPPSAPWPPPPATPPFPAVVQPYPLPVFPPRGGSQPLPP
APTSVPPAAFPAPLVTPMVALVLPNYLFPTPSTYPYGAPQMPAEGPPTPASRSPSPSLPP
SPPHRSDSPLFNSRCSSPLQLNLLQLEEAPRGEGGAAAAGSGSSAGHPPPSEETAEPEAR
LAEVTESSNQDALSGSSDLLELLLQEDSRSGTGSAASGSLASGLGSGSGSHEGGSTSASI
TRSSQSSHTSKYFGSIDSSEAEAGAAQARAEPGDQVIKYVLQDPIWLLMANADQRVMMTY
QVPSRDMASVLKQDRZRLRAMQKQQPRFSEDQRRELGAVHSWVRKGQLPRALDXMACVDC
GSSTQEPGHPDDPLFSEVDGLGLEPMEEGGGEGGGGGGEGEGSDEAQAQAGARVSSSQDL
AMEEEEQGGSSPSPALPATENGTS
NT seq 3855 nt   +upstreamnt  +downstreamnt
atgagcaggagcggccccctagaaggggctgaagggggaggggaccccaggccaggggaa
cccttttgtcctggagggggtccatcccctgggcctccagagcaccgaccttgtcctggc
cccagcttggctgatgacacggatgccaacagcaatggctctagcggcaatgagtccaat
ggacccgagtccaggggtgcatctcagcggagttcgcacagctcctcctccggcaatggc
aaggactcagctctgctggagaccactgagagcagcaagagcacgaactctcagagccca
tccccacccagcagttctattgcctatagcctcctgagtgccagctctgagccagacaac
ccttctaccagtggctgcagcagtgaacagtcagctcgggcaaggactcagaaagaactc
atgacggcactgcgagagctcaagcttcggctgcccccggagcgcaggggcaagggccgc
tccgggactctggccacactgcagtacgcgctggcctgtgtcaagcaggtgcaagccaac
caggagttctaccagcaatggagcctggaggagggcgaaccgtgtgccatggacatgtcc
acctatactctggaggagctggagcacgtcacatctgagtacacactccgcaaccaggac
accttctccgtggctgtctccttcctgacaggccgcatcgtctacatttccgagcaggcg
ggtgtcctgctgcgctgcaagcgggacgtgttccggggtgcccgcttctctgagcttttg
gctccccaggacgtgggcgtcttctacggttccaccaccccatcccgcctgcccacctgg
ggcccagggacctctgcaggttcaggcctcaaggacttcacccaggagaagtctgtcttc
tgtcgtatcagagggggtcctgaccgggatccggggcctcggtaccagccattccgccta
accccatatgtgaccaagatccgggtctccgacggggcccctgcccagccatgctgcctg
ctcatcgcagagcgcattcactctggttatgaagctccccggatcccccctgacaagagg
atcttcaccacacgacacacgcccagctgcctcttccaggatgtggatgagagggctgcc
ccgctgctaggctacctcccccaggacctcctgggggccccagtgctcctcttcctgcat
ccggaggaccgacccctcatgctggccattcacaagaagatcctgcagctggncggccag
ccctttgaccactcccctattcgcttctgtgcccgtaatggggagtacgtcaccatggac
accagctgggctggtttcgtgcacccctggagccgcaaggtggcctttgtgttgggccgc
cacaaagtacgcacggcgcccctgaatgaagatgtattcactcccccggtccccagccct
gctctgtccctggactctgacatccaagagctctcagagcagatccaccggctgctgtta
cagcctgtgcacagccccagccccacgggcctctgtggagtaggccccgtgccttcctct
ggccctctcctcagccctggctcctccagtgacagcaatgggggtgatgccgagggacct
gggcctcctgccccggtgaccttccagcagatctgtaaggatgtgcacctggtgaagcat
caggggcagcagctttttattgagtcccgggcccggcctctgccccggccccgtgtccct
gctactggcacattcaaggccaagacccttccctgccaatccccagacctggaggcggcc
ccggctccaatccaggccccagtggccttggccgctgaggatgctgagcggaaagaagcc
tccagttgctcctaccagcagatcaactgcctggacagcatcctcaggtacctggagagc
tgcaacctccccagcaccgcaaagcgcaaatgtgcgtcctcctcttcctgcactgcctct
tcggcctccgacgacgacargcagcgggcaggcccagtctctgtgggcgccaagaaagat
ccatcagcagtgctgcctggggagggggccacccctctgaaggagccggtggtgggagga
ggagccctgagcccactcgccctggccaataaggcggagagcgtggtgtccatcaccagt
cagtgtagcttcagctccaccatcgtccatgtgggagacaagaagcccccggagtcggac
atcatcatgatggaggacctgcccagcctgcctcctggtccagctcccagcccagcccct
agtcctacggtagcccctgacccagccccagacgcctaccgcccagtgggcctgaccaag
gccgtgctgtccctgcacacacagaaggaggagcaggccttcctcagccgcttccgtgac
ttcagcaggctgcgtggactggacagctcctccacagccccctcggcccctggcgagcga
ggctgccaccacagccttgccatccccggccgccgccaccactgccgatccaaagccaag
cgctcacgtcaccaccagacaactcgggccgaagcccccggctacatctcccagccctcg
cctgtgccaccctctgccccctggcccccgccaccagccactcctcccttcccagctgtg
gtccagccatacccactccccgtgttccccccgagaggtggctctcagcctctccctcct
gctcccacgtctgtgcctcctgcagctttccctgcccccctggtgacccccatggtggcc
ttggtgctccctaactatctgttccctaccccatccacctacccctacggggcaccccag
atgcctgctgaggggcctcctacccctgcctcccgctccccgtctccgtccctgcccccg
agccctccccaccgctccgactctccgctcttcaactcaagatgcagctccccactccag
ctaaacctgctgcagcttgaggaggcccctcgaggtgaggggggtgcagcggcagcgggc
tctgggagcagtgctgggcacccccctcccagcgaggagacggcagaaccagaggccaga
ctggcggaggtaactgagtcctccaaccaggatgctctctcgggctccagtgacctgctg
gagttgctgctacaagaggactctcgatcaggcacgggctctgctgcctcaggctccttg
gcctccggcttgggctctggttcaggctcccatgaggggggcagcacttccgccagcatc
acgcgcagcagtcagagcagccacacgagcaagtactttggcagcatcgattcttcagag
gctgaggctggggctgcccaggccagggctgagcctggggaccaggtcattaagtatgtg
ctccaggatcccatctggctgctcatggccaatgctgaccagcgtgtcatgatgacttat
caggtgccctccagggacatggcctctgtgctgaagcaggaccggsagcggctccgggcc
atgcagaagcagcagcctcggttctcggaggaccagcggagggaactgggtgctgtgcac
tcctgggtccggaaaggtcaactgcctcgggcccttgatktgatggcctgtgtggactgc
ggtagcagcacccaagagcctggccatcctgatgaccctctcttctcggaagtggatgga
ctggggctggagcccatggaggagggcggaggcgagggtggtggcggtggtggtgagggt
gagggcagcgatgaggcccaggcccaagctggggccagggtctcgagctctcaggacctg
gccatggaagaggaggagcaaggtgggagctcacccagtccagccttacctgccacagaa
aatggcaccagctag

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