Bos indicus (zebu cattle): 109573766
Help
Entry
109573766 CDS
T04792
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03013
Nucleocytoplasmic transport
biu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109573766 (SRRM1)
03015 mRNA surveillance pathway
109573766 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109573766 (SRRM1)
03041 Spliceosome [BR:
biu03041
]
109573766 (SRRM1)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109573766 (SRRM1)
Spliceosome [BR:
biu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
109573766 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
SR-25
Motif
Other DBs
NCBI-GeneID:
109573766
NCBI-ProteinID:
XP_019836747
UniProt:
A0A6P5DHT6
LinkDB
All DBs
Position
2:complement(132546597..132575834)
Genome browser
AA seq
915 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATS
TSDILKVPKTEPVLEPKEPSPEKNSKKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRH
RSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSS
SSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNR
TRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQR
RQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKEASP
RMQMGKRWQSPMTKSGRRRRSPSPPPARRRRSPSPAPPPRRRRSPTPPPRRRTPSPPPRR
RSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPXPKRRVSHSPPPKQRSSPV
TKRRSPSLSSKHRKGSSPSRSAREARSPQPNKRHSPSPRPRAPQTSSPPPARRGASXSPQ
RRQSPSPSSRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPS
PVQSQSPSTNWSPAVPVKKAKSPTPSPSPARNSDPEGGGKKKKKKKDKKHKKDKKHKKHK
KHKKEKAVAAAAAAAVTPAAVAAPTTTSAQEEPEAEPEPKKETESEPEDNLDDLEKHLRE
KALRSMRKAQVSPQS
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggataatcggttcagcaacaaa
cagaagaagctactgaagcagctgaaattcgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gattcgaaaatgatgcaaatcaacctgaccgggtttttgaatggaaaaaatgctagagaa
tttatgggagaactgtggcccctactcttaagtgcacaagaaaacatcgctgggatccct
tctgctttcctagaactgaagaaggaagaaataaaacagagacagattgaacaagaaaag
ttggcatctatgaaaaagcaagatgaagacaaggataagagggataaagaagaaaaagaa
agcagcagagaaaaaagggagcggtctcgaagcccaagaagacgcaaatccagatctcct
tcccctagaagacgatcttctcctgtcaggagagagagaaagcgcagtcattctcgatct
ccccgtcacagaaccaaaagccggagtccttcccctgctccagagaagaaggaaaaaact
ccagagctccccgagccatcagtgaaagtaaaagaaccttcagtacaagaggccacttct
acgagtgacatcctgaaagttcccaagactgaaccagtactagagcctaaagaaccttct
ccagagaaaaactccaaaaaggaaaaggaaaagacccgaccaagatctcggtcacgttcc
aagtcaagatccaggacacgttctcgctctccttctcatactagaccaagaaggcgccat
agatctcgatcaagatcatactcacctagaaggcggccaagcccaagaagacggccatct
cctcgaagaagaaccccgccgagacgaatgcctcctccaccaaggcacaggaggagtaga
tctccagtgagacgaagaaggcgttcatcggcatccttgtctgggagtagttcatcatca
tcttcatctcgttcccggtcaccgccaaagaagcctccgaagaggacatccagccctcct
cgaaaaactcgtaggttatctccttcagcaagtcctccgaggcgaaggcataggccatca
cctccagctactccgccgccaaaaactcgtcattccccaacaccccagcagtcaaaccgt
acaaggaaaagtcgtgtttctgtctctccagggagaacttcaggtaaagtgacaaaacat
aaaggtactgagaaaagagaatccccttcaccagcaccgaagcctcggaaagtagagttg
tctgaatcggaagaagataaaggtggcaaaatggctgcagcagattctgtgcagcagaga
cgccagtatagacgacagaaccagcagtcttcatctgattctggctcctcctcttcctca
gaagatgaacgacccaaaaggtcccatgtgaagaatggtgaggtaggcaggcgacggaga
cattccccttcccggagtgcctctccatcacctcgaaagcgccagaaagaggcttcccct
cggatgcagatgggaaagcgatggcaatcgccaatgactaaaagtggtagacggaggaga
agtccctccccacctcccgccagaaggcgacgttctccttctcctgctcctccacctcgt
cgacgcaggtctcccacaccaccaccacgacgaaggactccgtctcctcctccacgccgt
cgctcaccttccccaagaagatactctcctccgatacagaggagatactctccttctcca
cctccaaagagaagaacggcttcgccccctccccctcctaaacgaagggcatcaccatct
ccamcaccaaagcgtcgggtctcccattcaccacctcccaaacaaagaagctccccagtc
accaagagacgttcgccttcattgtcatcaaagcataggaaagggtcttccccgagccga
tctgcccgggaggcccggtcaccacagccaaacaaacggcattcgccctcaccacggcct
cgcgctcctcagacctcaagtcctccacctgctcgaagaggagcatcatygtcaccccaa
agaaggcagtccccatctccaagttctaggcccattaggagagtctccaggactccggaa
cccaaaaagataaaaaaagctgcctcaccaagccctcagtcggtaaggagggtctcatct
tcccgatctgtctcrggatctcctgagccagcagctaaaaagcccccagcacctccgtca
cctgtccagtctcagtcaccctccaccaactggtcaccagcggtaccggttaaaaaggct
aaaagcccaacaccaagcccatcaccggcaaggaattcagacccagaaggaggtggaaag
aaaaagaagaaaaagaaggacaagaaacacaaaaaggataagaagcacaagaagcacaaa
aaacacaagaaggagaaggctgtagctgcygctgctgcagccgctgtgacccctgcagct
gtagctgctcccacaaccacatcagcacaggaagaaccggaggcagagccagagcctaag
aaggagactgaaagtgagcctgaagataaccttgatgacttagaaaagcacctgcgtgaa
aaggccctgagatcaatgcggaaggctcaagtgtccccacagtcctag
DBGET
integrated database retrieval system
