KEGG   Bos indicus (zebu cattle): 109573854
Entry
109573854         CDS       T04792                                 
Symbol
CASC3
Name
(RefSeq) protein CASC3
  KO
K14323  protein CASC3
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu03013  Nucleocytoplasmic transport
biu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:biu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109573854 (CASC3)
   03015 mRNA surveillance pathway
    109573854 (CASC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:biu03019]
    109573854 (CASC3)
Messenger RNA biogenesis [BR:biu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     109573854 (CASC3)
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 109573854
NCBI-ProteinID: XP_019836921
UniProt: A0A6P5DFB8
LinkDB
Position
19:41698629..41720513
AA seq 703 aa
MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSCSGSVGGGGSGSLPSQRGGRAGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGDDGEYSEEENSKVELKSEAN
DAANSSAKDEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPSWIGERPNKSHRHQGPGGTLPPRTFINRN
AAGTGRMSAPRNYSRSGGFKEGRTGFRPAEAGGQHAGRSGETVKHETSYRSRHLEQTPVR
DPSPEADAQVLGSPEKEEVAPEIPNPAPDTAPPVPDRPIEKKSYSRARRTRIKAGDAGKV
AEEVPPPPEGLTPAPPVPEATPPTPAKTGNWEAPVDSTTGGLEQDVAQLNITEQNWSPGQ
PAFLQSRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHI
SIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLY
PPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQV
YGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq 2112 nt   +upstreamnt  +downstreamnt
atggcggaccggcggcggcagcgcgcttcgcaggacaccgaggacgaagaatctggtgcc
tccggctcagacagcggcggttccccggcgcggggcggtgggagctgcagcggtagtgtt
ggaggcggcggcagcggctctctgccttcccagcgcggagggcgagctggggcccttcat
ctgcggcgggtggagagcgggggcgctaagagcgcwgaggagtcggagtgtgagagtgaa
gatggcatcgagggcgatgctgttctttcggattatgaaagtgcagaagactcagaaggt
gatgacggggagtacagtgaagaggaaaactccaaagtggagctgaaatcagaagccaat
gatgctgctaattcttcagcaaaagatgagaagggagaagaaaagcctgacaccaaaggc
actgtgactggagagaggcaaagtggggatggacaggaaagcacagagcctgtggagaac
aaagttggtaaaaagggccctaagcatttggatgatgatgaagatcggaagaacccagca
tacataccccggaaagggctcttttttgagcatgatcttcgagggcagactcaggaggaa
gaagtcagacccaagggacgtcagcgaaagctgtggaaggatgagggtcgctgggagcat
gacaagtttcgggaagatgaacaggctccaaagtcccgacaggagctcattgctctttat
ggatatgacatccgctcagctcacaatcctgatgatatcaaaccccgaagaatccggaaa
cctaggtttgggagtcctccacaaagagatccaagctggattggtgagcggccaaataag
tcccatcgccaccagggtcctgggggcaccctaccacccaggacatttatcaacaggaat
gctgcgggtactggccgcatgtcggctcccaggaattactctcgatctggaggcttcaag
gaaggtcgtactggttttaggcctgcggaagctggtgggcagcatgctggccggtctggt
gagactgttaaacatgagactagttaccggtctcggcatttggagcagactcctgtaagg
gatccatctccagaagcagatgctcaagtgcttggcagtcctgagaaggaagaggtagcc
cccgagataccaaatcctgctcctgatactgcaccaccagttcctgacaggcctattgaa
aagaaatcctattcccgggcaagaagaaccagaatcaaagctggagatgcaggcaaggtt
gcagaggaggtgccccctccacctgaagggctgaccccmgcacctccagtcccagaagct
acacctcctacgcctgctaagactggaaactgggaggctccggtggattctactacaggg
ggtcttgaacaagatgtggcacaactaaatataacagaacagaactggagtccagggcag
cctgccttcctgcaatcacgggagcttcggggtatgcccaaccacatacacatgggagca
ggacctccacctcagttcaaccgaatggaagaaatgggtgtccagggtgggcgagccaaa
cgctattcatcacaacggcaaagacctgtgccggagccccctgcccctcctgtgcatatc
agcatcatggaaggacattactatgatccactgcagttccagggaccaatctatacccat
ggtgacagccctgccccactgcctcctcagggcatgattgtacagccagaaatgcacctt
ccccacccaggtttacatccccaccagacaccggcacctctgcccaatccaggcctctat
cccccaccagtatccatgtctccagggcaaccaccacctcagcagttgcttgctcctact
tacttttctgctccaggcgtcatgaactttggcaatcccagttacccttatgctccaggg
gcattgcctcccccaccacctcctcatctgtatcctaacacacaggccccatcgcaggta
tatggaggagtgacctactataaccccgcccagcagcaggtgcagccaaagccctcccca
ccccggaggactccccagccagtcaccatcaagcccccaccgcctgaggttgtaagcagg
ggttccagctaa

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