Bos indicus (zebu cattle): 109573854
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Entry
109573854 CDS
T04792
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03013
Nucleocytoplasmic transport
biu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109573854 (CASC3)
03015 mRNA surveillance pathway
109573854 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109573854 (CASC3)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109573854 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
109573854
NCBI-ProteinID:
XP_019836921
UniProt:
A0A6P5DFB8
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Position
19:41698629..41720513
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AA seq
703 aa
AA seq
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MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSCSGSVGGGGSGSLPSQRGGRAGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGDDGEYSEEENSKVELKSEAN
DAANSSAKDEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPSWIGERPNKSHRHQGPGGTLPPRTFINRN
AAGTGRMSAPRNYSRSGGFKEGRTGFRPAEAGGQHAGRSGETVKHETSYRSRHLEQTPVR
DPSPEADAQVLGSPEKEEVAPEIPNPAPDTAPPVPDRPIEKKSYSRARRTRIKAGDAGKV
AEEVPPPPEGLTPAPPVPEATPPTPAKTGNWEAPVDSTTGGLEQDVAQLNITEQNWSPGQ
PAFLQSRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHI
SIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLY
PPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQV
YGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcttcgcaggacaccgaggacgaagaatctggtgcc
tccggctcagacagcggcggttccccggcgcggggcggtgggagctgcagcggtagtgtt
ggaggcggcggcagcggctctctgccttcccagcgcggagggcgagctggggcccttcat
ctgcggcgggtggagagcgggggcgctaagagcgcwgaggagtcggagtgtgagagtgaa
gatggcatcgagggcgatgctgttctttcggattatgaaagtgcagaagactcagaaggt
gatgacggggagtacagtgaagaggaaaactccaaagtggagctgaaatcagaagccaat
gatgctgctaattcttcagcaaaagatgagaagggagaagaaaagcctgacaccaaaggc
actgtgactggagagaggcaaagtggggatggacaggaaagcacagagcctgtggagaac
aaagttggtaaaaagggccctaagcatttggatgatgatgaagatcggaagaacccagca
tacataccccggaaagggctcttttttgagcatgatcttcgagggcagactcaggaggaa
gaagtcagacccaagggacgtcagcgaaagctgtggaaggatgagggtcgctgggagcat
gacaagtttcgggaagatgaacaggctccaaagtcccgacaggagctcattgctctttat
ggatatgacatccgctcagctcacaatcctgatgatatcaaaccccgaagaatccggaaa
cctaggtttgggagtcctccacaaagagatccaagctggattggtgagcggccaaataag
tcccatcgccaccagggtcctgggggcaccctaccacccaggacatttatcaacaggaat
gctgcgggtactggccgcatgtcggctcccaggaattactctcgatctggaggcttcaag
gaaggtcgtactggttttaggcctgcggaagctggtgggcagcatgctggccggtctggt
gagactgttaaacatgagactagttaccggtctcggcatttggagcagactcctgtaagg
gatccatctccagaagcagatgctcaagtgcttggcagtcctgagaaggaagaggtagcc
cccgagataccaaatcctgctcctgatactgcaccaccagttcctgacaggcctattgaa
aagaaatcctattcccgggcaagaagaaccagaatcaaagctggagatgcaggcaaggtt
gcagaggaggtgccccctccacctgaagggctgaccccmgcacctccagtcccagaagct
acacctcctacgcctgctaagactggaaactgggaggctccggtggattctactacaggg
ggtcttgaacaagatgtggcacaactaaatataacagaacagaactggagtccagggcag
cctgccttcctgcaatcacgggagcttcggggtatgcccaaccacatacacatgggagca
ggacctccacctcagttcaaccgaatggaagaaatgggtgtccagggtgggcgagccaaa
cgctattcatcacaacggcaaagacctgtgccggagccccctgcccctcctgtgcatatc
agcatcatggaaggacattactatgatccactgcagttccagggaccaatctatacccat
ggtgacagccctgccccactgcctcctcagggcatgattgtacagccagaaatgcacctt
ccccacccaggtttacatccccaccagacaccggcacctctgcccaatccaggcctctat
cccccaccagtatccatgtctccagggcaaccaccacctcagcagttgcttgctcctact
tacttttctgctccaggcgtcatgaactttggcaatcccagttacccttatgctccaggg
gcattgcctcccccaccacctcctcatctgtatcctaacacacaggccccatcgcaggta
tatggaggagtgacctactataaccccgcccagcagcaggtgcagccaaagccctcccca
ccccggaggactccccagccagtcaccatcaagcccccaccgcctgaggttgtaagcagg
ggttccagctaa
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