Bos indicus (zebu cattle): 109574055
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Entry
109574055 CDS
T04792
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03030
DNA replication
biu03420
Nucleotide excision repair
biu03430
Mismatch repair
biu03440
Homologous recombination
biu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109574055 (RPA1)
03420 Nucleotide excision repair
109574055 (RPA1)
03430 Mismatch repair
109574055 (RPA1)
03440 Homologous recombination
109574055 (RPA1)
03460 Fanconi anemia pathway
109574055 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
biu03000
]
109574055 (RPA1)
03032 DNA replication proteins [BR:
biu03032
]
109574055 (RPA1)
03400 DNA repair and recombination proteins [BR:
biu03400
]
109574055 (RPA1)
Transcription factors [BR:
biu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109574055 (RPA1)
DNA replication proteins [BR:
biu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
109574055 (RPA1)
DNA repair and recombination proteins [BR:
biu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
109574055 (RPA1)
MMR (mismatch excision repair)
109574055 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
109574055 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
109574055
NCBI-ProteinID:
XP_019837331
UniProt:
A0A6P5DGI3
LinkDB
All DBs
Position
19:22990490..23036948
Genome browser
AA seq
616 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEEERLSSNCICQINRFIVNTLKDGRRVVILMELEVLKSAEAVGSKIGNPVPYNE
GHGQQPVVPPPVSAASPPTSRPQQQNGSPGMASTASKAFGASKTFGKAGGTSQVNSSGGT
QAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QADKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDGHHLPTVQF
DFTGIGDLESKSKDSLVDIIGICKNYEDVTKIIVKSNNREVSKRNIYLMDMSGKVVNATL
WGDDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQ
ALDGISISDLKSGGAGGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMILSVNIADFQENQWVTCFQESAEAIL
GQSTAYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVVDVKPVDYR
EYGRRLVMNIRRNAAM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccacctgagcgagggggccattgcggccatcatgcaacagggagatacatct
ataaaacccatcctccaagtcattaacatccgtcccattactacagggaatagtccaccc
cgttatcgactgcttatgagtgatggattgaatactctatcttcattcatgttggcaaca
cagctgaaccctcttgttgaggaagagcgattgtctagcaactgtatttgccagattaac
cgatttattgtgaacacsctgaaagayggaaggagagtggttattttgatggagttagaa
gttttgaaatcagctgaagcagttggatcaaagattggcaacccagtgccttataatgaa
ggacacggacagcagccagtagttcctcctcctgtctcagcagccagtccaccaaccagc
aggccccagcaacagaatgggagcccaggaatggcttccactgcatctaaggcttttggt
gcctcaaagacatttggaaaagctggtggtaccagccaagtgaacagctctgggggaaca
caggccaaagtggtacccattgccagcctcaccccgtaccaatccaagtggactatctgt
gctcgtgtcaccaacaaaagtcagatccgtacctggagcaactcccgaggggaagggaag
cttttctccatagaactggttgatgagagtggtgaaatcagagcgactgctttcaatgaa
caagcggacaagtttttcccccttattgacgtgaacaaggtctattatttctctaaaggc
accctgaagatcgccaacaaacagttcacagccgtcaaaaatgactatgagatgaccttc
aacaacgagacttctgtcatgccctgtgaagacggccatcacttacccacagttcagttt
gatttcacagggattggcgacctggagagcaaatctaaggactcgcttgtagacataatc
gggatctgcaagaactacgaagatgtcacaaaaatcatagtgaagtctaacaacagagaa
gtctcgaagagaaatatctatctgatggatatgtcagggaaagtggtgaacgctaccctg
tggggagacgatgctgataaatttgatggctctagacaacccgtgatggccatcaaagga
gccagagtttctgattttggtggacggagcctctctgtcctatcttcaagcaccatcatt
gtgaaccctgacatcccagaggcctataagcttcgcggatggtttgactcagaaggacaa
gccttagatggcatttccatctctgatctaaagagtggaggagcaggtgggagcaatacc
aactggaaaacattatatgaggtcaagtcggagaacctgggccaaggtgacaagcctgac
tattttagctctgtggcaactgtggtgtatcttcgcaaagagaactgtatgtaccaggcc
tgcccaactcaggattgtaacaagaaagtgatcgaccagcagaacggattgtaccgctgc
gagaagtgtgacagtgaattccccaatttcaagtaccgcatgatcctgtcagtcaatatt
gccgattttcaagagaatcagtgggtcacatgtttccaggagtctgcagaggccatcctt
ggacaaagcactgcttatcttggggaattaaaagagaagaacgagcaagcgtttgaggaa
gttttccagaatgccaactttcgatcttttacgttcaggatcagggtcaaactggagacc
tacaatgatgagtctcgaattaaggccacggtggtggacgtgaagcctgtggactacaga
gaatacggcagaaggctggtcatgaacatcaggaggaacgcggcgatgtga
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