Bos indicus (zebu cattle): 109574262
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Entry
109574262 CDS
T04792
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03013
Nucleocytoplasmic transport
biu03015
mRNA surveillance pathway
biu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109574262 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
109574262 (EIF4A3)
03015 mRNA surveillance pathway
109574262 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109574262 (EIF4A3)
03041 Spliceosome [BR:
biu03041
]
109574262 (EIF4A3)
03009 Ribosome biogenesis [BR:
biu03009
]
109574262 (EIF4A3)
03012 Translation factors [BR:
biu03012
]
109574262 (EIF4A3)
Enzymes [BR:
biu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109574262 (EIF4A3)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109574262 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
109574262 (EIF4A3)
Spliceosome [BR:
biu03041
]
Complex C
Other components
EJC/TREX
109574262 (EIF4A3)
Ribosome biogenesis [BR:
biu03009
]
Eukaryotic type
90S particles
Helicases
109574262 (EIF4A3)
Translation factors [BR:
biu03012
]
Eukaryotic type
Initiation factors
eIF-4
109574262 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
TniB
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
109574262
NCBI-ProteinID:
XP_019837752
UniProt:
A0A6P5DKS8
LinkDB
All DBs
Position
19:53987875..53999674
Genome browser
AA seq
411 aa
AA seq
DB search
MAATATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcggctacggccacgatggcgacctcgggttcggcgcggaagcggctactcaaagag
gaagacatgaccaaagtggaattcgagactagcgaggaggtggacgtgacccccacattc
gacaccatgggcctkcgggaggacttgctgcgcggcatctatgcctacggttttgaaaaa
ccatcagcaatccagcagcgagctattaagcagataattaaaggaagagatgtcattgcg
caatctcagtctggtacaggcaaaacagccaccttcagtatttctgtcctccagtgtctg
gatattcaggttcgtgaaacccaagctytgatcttggctccaacaagagagttagctgta
cagatccagaagggcctgcttgctttgggtgactacatgaacgtccagtgccatgcctgc
atcgggggcaccaatgtgggggaggacatcaggaaattggactacggacagcacgttgtc
gccggcacacctgggcgtgtctttgatatgattcgtcgcaggagtttgaggacacgtgct
atcaagatgttggttttggatgaggctgatgaaatgttgaataaaggtttcaaagaacag
atctacgaygtgtacaggtacttgcccccagccacacaggtggtgctcatcagtgccaca
ctgccccacgagatcctcgagatgaccaacaagttcatgaccgaccccatccgcatcttg
gtaaaacgtgatgaactgactctcgaaggcatcaagcagttttttgtggctgtggaacgg
gaagagtggaagtttgacaccctrtgtgacctctatgacacgctgaccatcacacaggct
gtcatcttctgtaacaccaagaggaaggttgactggctgacggagaagatgagggaagct
aactttaccgtgtcgtccatgcacggggacatgccccagaaggagcgagagtccatcatg
aaggagttccggtcaggtgccagccgagtgctcatytctaccgacgtctgggcccggggg
ctggaygtgccccaggtgtccctcatcattaactatgacctgcccaacaacagagagctg
tacatacacagaattgggcgatcaggtcgatatggccgaaagggtgtggctattaatttt
gtaaagaatgatgatatccgcatcctcagagacatcgagcagtactactccactcagatt
gatgagatgcccatgaacgttgctgatctgatctga
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