Bos indicus (zebu cattle): 109574270
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Entry
109574270 CDS
T04792
Symbol
DDX52
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
biu03009
]
109574270 (DDX52)
Enzymes [BR:
biu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109574270 (DDX52)
Ribosome biogenesis [BR:
biu03009
]
Eukaryotic type
90S particles
Helicases
109574270 (DDX52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
Cas3-like_C_2
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
109574270
NCBI-ProteinID:
XP_019837769
UniProt:
A0A6P5DJ80
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Position
19:complement(13356042..13378699)
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AA seq
596 aa
AA seq
DB search
MDAHDLFRRLGVGAKFDLRRFSADAARFQIGKRKYDFDSSEVLQGLDFFGNKKPVPGDCG
ALRTHQELPDEEKTEESQIERKKQNRKKKKITSEITSEEEVSTIQWISSVEAKIEDKNVK
RKNKLTSGKLEQLRKEKLNFFRNKHKXHVQGTDLPDPIATFQQLDQEYKINSRLLQNILD
AGFQTPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMHLKQPTNKGFRALIISP
TRELASQIHRELVKLSEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQ
DPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVKRAMFSATFAYDVEQ
WCRLNLDSVITVSVGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSI
ERAKELFHELIYEGINVDVIHADRTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVN
LVINYDFPTSSVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRSVANVIQQAGCPVPEYI
KGFQKLLSKQKKKMIKKPLERESISTTPKYFLEKAKDKRKKVTGQNKKKVAPEDKS
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcacgatctgtttcgccggctcggcgtgggggccaaattcgacttgagacgc
ttttcagcggacgcagctcgattccagataggaaaaaggaaatatgactttgattcctcg
gaggtgctacagggactggacttttttggaaacaaaaagcctgtcccaggtgattgtggg
gcattaagaactcatcaggagctaccagatgaagagaaaacagaagaaagccaaattgaa
aggaagaagcagaacaggaaaaagaagaagataacttcagaaattacttctgaagaagaa
gtttctactatacagtggatatcatctgtggaagcaaagattgaagataaaaatgttaaa
agaaaaaataaactaacttcaggaaagttagagcagctaagaaaagaaaagctaaacttc
ttccggaataaacataaanttcatgtccaaggaactgatcttcctgacccaattgctacg
tttcagcaacttgaccaggaatataaaatcaattctcgactgcttcagaacattctagat
gcaggcttccagacacctacaccaatccaaatgcaagccattccagttatgctgcatggt
cgagaacttctggcttctgctcctactggatctggaaagactttggcttttagcattcct
attttaatgcacctgaaacaacccacaaataaaggcttcagagccctgattatatcacca
acacgagaacttgccagccagattcaccgagagttagtaaaactgtctgagggaacagga
ttcaggatacacatgatccacaaagcagcagttgcagccaagaaatttggacctaaatca
tctaagaaatttgatatccttgtgactactccaaatcgactaatctatttattaaaacaa
gatcctccaggaatagacctaacgagtgttgaatggctggtagtagatgaatcagataaa
ctgtttgaagatggcaaaactgggttcagagaccagctggcttccattttcttggcctgt
acatcccacaaggtgaagagagctatgttcagtgcaacgtttgcctatgacgttgaacag
tggtgcagactgaacttggacagtgtcattactgtatccgttggagcaaggaattctgca
gtagagacggtagaacaagagcttctctttgttggttcagagactggaaaactactggcc
atgagagaacttgttaaaaagggtttcaatccacctgttcttgtttttgttcagtccatt
gaaagggctaaagaactttttcatgagctcatatatgaaggtattaacgtggatgttatt
catgcagacagaacacagcaacagagagataacacagtccacagcttcagagcaggaaaa
atctgggttcttatttgtacagccttgctagccagagggatcgattttaaaggtgtgaac
ttggttatcaactatgactttccaaccagctcagtggaatatattcacaggataggtcga
actggaagagctgggcataaaggaaaagctgttacatttttcactgaagatgataaacca
ttattaagaagtgttgccaatgttatccagcaggctggatgtcctgtcccagaatacata
aaaggtttccagaaactactaagtaaacaaaagaaaaagatgattaagaagcccttggaa
agggagagcattagtacaactccaaaatattttttagaaaaagcaaaggataaacggaaa
aaggtcactggtcagaacaagaagaaagtagctcctgaggacaaaagttaa
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