Bos indicus (zebu cattle): 109574906
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Entry
109574906 CDS
T04792
Symbol
PAPD7
Name
(RefSeq) non-canonical poly(A) RNA polymerase PAPD7 isoform X1
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109574906 (PAPD7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109574906 (PAPD7)
03016 Transfer RNA biogenesis [BR:
biu03016
]
109574906 (PAPD7)
Enzymes [BR:
biu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
109574906 (PAPD7)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
109574906 (PAPD7)
Transfer RNA biogenesis [BR:
biu03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
109574906 (PAPD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
PAP_NTPase
Motif
Other DBs
NCBI-GeneID:
109574906
NCBI-ProteinID:
XP_019838489
UniProt:
A0A6P5DMQ8
LinkDB
All DBs
Position
20:complement(70346633..70391067)
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AA seq
542 aa
AA seq
DB search
MSPCPEEAAMRREVVRRIETVVKDLWPTADVQIFGSFSTGLYLPTSDIDLVVFGKWERPP
LQLLEQALRKHNVAEPGSIKVLDKATVPIIKLTDQETEVKVDISFNMETGVRAAEFIKNY
MKKYSLLPYLILVLKQFLLQRDLNEVFTGGISSYSLILMAISFLQLHPRIDARRADENLG
MLLVEFFELYGRNFNYLKTGIRIKEGGAYIAKEEIMKAMTSGYRPSMLCIEDPLLPGNDV
GRSSYGAMQVKQVFDYAYIVLSHAVSPLARSYPNRDSESTLGRIIKVTQEVIDYRTWIKE
KWGGRVHATPDPDNRVKTAERMGTCEGDQPPRRDPEPPLGPRLTLPLPGPQLRSSGSSAS
SVSSLSGSDIDSDTPPCTTPSVYQFSLQAPTPLLASLPAALPMASGKPQSTTSRTLVMTT
NTQTRFTIPPPTLGVAPVPCRQAGIEAAPALKAVHHVSSPAIPSASPNPLSSPHLYHKQH
SGMKLSMKGSHSHGQGGSYSSVGTGGVRPPVGNRGHHQYNRTGWRRKKHTHTRDSLPVSL
SR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtccccttgtcctgaagaagctgccatgagaagagaagtggtgaggaggatcgagacc
gtggttaaggacctctggccgacggccgatgtgcagatattcggcagcttcagcactggt
ctctaccttcccaccagtgacatcgacctagtggtctttgggaagtgggagcgcccccca
ctgcagctgctggagcaggccctgcggaagcacaacgtggctgagccgggctccatcaag
gtcttggacaaggcgacggtaccaattataaaactcacagaccaggaaacagaagttaaa
gtcgacatcagctttaacatggagaccggggtgcgggcagcggagttcatcaagaattac
atgaagaaatattcgttgctgccttacttgattttagtactgaaacagttcctcctgcag
agggacctgaatgaagtttttacaggcgggattagctcgtacagcctcattttaatggcc
attagctttctgcagctgcatccgagaattgacgcccggagagcagatgagaacctcggg
atgctgcttgtggaattttttgaactctatggaagaaattttaattacttgaaaactggt
attagaataaaagaaggaggtgcctatatcgccaaagaggagatcatgaaagccatgacc
agcgggtacagaccgtcgatgctgtgcattgaggaccccctgctgcctgggaacgacgtg
ggccggagctcctacggggccatgcaggtgaagcaggtgttcgactacgcctacattgtc
ctcagccacgccgtgtcgccgctcgcccggtcctaccccaacagagactccgaaagcacc
ttagggaggatcatcaaggtgactcaggaggtgatcgactaccggacatggatcaaggag
aagtggggcggcagggtccacgcgacaccagaccccgacaacagggtgaagaccgcagag
cggatgggcacctgcgagggggaccagcctcctcgacgagaccccgagcctcccttgggc
ccgcgcctgaccctgcccctgcctggcccacagctccggtcatccggctcgtccgcctcc
tccgtgtcctcgctctctggcagcgacatcgactcagacacgccaccctgcaccacgccc
agcgtgtaccagttcagcctccaggcgcccacccccctgctggccagcctgcccgccgcc
ctgcccatggcgagtggcaaacctcagtccaccacgtccaggacactggtcatgacaacg
aacacgcagaccaggtttactatcccgcccccgacgctcggcgtggcccctgtgccctgt
agacaggcgggcatcgaagctgctccggcgctgaaggccgtccaccacgtgtcctccccg
gccatcccttctgcgtcccccaacccgctctccagcccccacctgtatcacaagcagcac
agcggcatgaagctgtccatgaagggctcccacagccacggccaaggcggcagctacagc
tcggtgggtactggcggcgtgcggcctcctgtgggcaaccggggccaccaccagtacaac
cgtaccggctggaggaggaagaaacacacgcacacgagggacagcctgcctgtcagcctc
agcaggtga
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