Bos indicus (zebu cattle): 109574931
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Entry
109574931 CDS
T04792
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
biu00535
]
109574931
04091 Lectins [BR:
biu04091
]
109574931
Proteoglycans [BR:
biu00535
]
Cell surface proteoglycans
Others
109574931
Lectins [BR:
biu04091
]
C-Type lectins
Others
109574931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
109574931
NCBI-ProteinID:
XP_019838519
UniProt:
A0A6P5DL37
LinkDB
All DBs
Position
20:25871770..25934094
Genome browser
AA seq
2271 aa
AA seq
DB search
MTGRITGGMHNLHFQHGIYIAGHGGLEVSYLDGQLPNFRGCMEDVVFNQREILSSLRSYP
GFKKVYEVSLGCSDEFFAGEDEAINFFSSRSYVTFPEWKVQRDGLLEFALQTGTQQALLL
FQSGREGDFVALEIVEGFLKAHVGRDRSDTQLSSFSLVSDNQWHDIQLRFTERYLGLMVD
EQRVRANLPLQSKLFVSAGPLFVGGLDRHKGEEVKRLGLASVPGKSAGGISFKGCLRGLE
ANSEKRALKDAFVSKDISAGCKMKGSDNENPSATTMEKLLLAEVPLSTADSEAGKPSLQD
VRSYFLVLNNLEVQEGGQALLEQRHMKVDMELKDLGIHQSQILFKIKEMPVYGFLRLDVS
PEQGPEKVFTLLDLEQGNVWYVHDGSEEPRDYFTFSVSSNSKREVPLYLQGHVSYVFNIV
VIPVNDPPNLKLPEGNLLLVFENSKKRLTPNIIHVSDPDTDSXSLSVSVLGNFNSDAGFL
ENINDPGRAINGFSYGDLRDGNIFCVHRGHPNSRILLRANDGELVSSTVVLRVMAIPWDL
AVANRTGVAVQQGGSVLITQSNLSVEVNGERPEVDTRYVITYPPRFGQIQQQGPGGEWKQ
ISTFSQRSVDXSQIRYCTTFKDLQLENVMDHFKFKVDIEGKSSEELVFPIXIQWLKFTLL
KNVALEISKIKRHVLNSDHLQAVTEGVEVXERELHFKLLTPPKKGKLLLGTEVLQTNSVF
SQQNITDGKISYEPQERPREHSQDSFRFLMVAKHTESKGYTFRINFKAERRHIIVTNRGL
LVKEGEGKLITKSELFAQTLDNRTFQYTVTKSPQHGKLKLIXSSDSPGNQDNITAFMDQD
ILGERLIYEHDDSETQSDEFFLVASTAGPVQEGAFRDLDMEHLSMDIKVTXSVELKNDEK
PVRMVDKVFHVVRNGQRLLTLSDICYHDPDSDFDDGQLLYIRRGIPNGDLVQASDPTQKL
YQFRQEDLREGRVLFRHRGADSARFVLFVTDGVHYTSSXLEVSVSDPYIRVVNNTGLLVQ
RGKDSSLTTANLSVTTNQDVRTDHXVEFRIVQLPKHGRVLVSSSAPGSFSMHDLKQGCVI
YRHDGSGSFDMFNLTVRVKDTHLYVGVYVQVDSESHQHHTRILHSKTLVVEEGKPVKLSR
GRLQAVHEHPVPSEAVFIVRTPPVHGYFRRSLPEEGSVGTEEKFPLMFTQQDVDDGYIHY
VQTXPDQQQDRFILDVMSGFQAVSRLEILVDIVPKRIPLAVQNFTVQEGGSKALPEDYFR
IPSKHFEGLDCEFVLLKPPKHGYVENSHFPRVKLMKFTRKQVENELISYVHDGSEALLDS
FIIFANSSELGKQSLPQTLFVTVESVNDEAPVITANKILQVWVNSVAEITRDELCAVDGD
SSPQDLAYLVSPPSNGHLALKSIPGRSIQNFTQAQINEGQLVFVHNGAMSGGFNFQVTDG
LNFAPRQIFSITARALIISLEVNRGLSIFPGSVKPLSSRBLRAVTNDVDSAGNRTITFTV
IRSPRLGRLLRVNSDNSTEDVSVFTQNLVSEQLILYQHMDWENMGWTAEDSFTFTVSSPP
AALGPEEFHITISYEINEPGRQSRLLANTGAVVKEGDKVLIDQSKLDASNLLLKLPKSQX
SLYEIWFQVTSLPHHGTLMVGERNITKRKPNFSQYIINTFGVTYLHDDSESLADNFTFAV
WPNEKSKSTMKPEADFHEEMFNITITPINDQAPELKTKGLRLQVLQGNRXVLGPENLKVE
DLDSPPEEIRYVVIXDPNNGFLAMAHHPXIPVHHFTQADIDNSQVWFIHDGSPSSGAFYF
SVSDGQHRPLYKLFHLDVIPVSITLVNLTDLLLPQGQTSVTITGXHLSAVTNGRSPHVTY
KVMRPLQHGHLXIEDQEVVSFGQEDLNLGKLSYHMTNLTASEDQLQFSLFTSESNLTGQT
LGIRVQPLLRVSSGLTVANRVAHQLXRKDLDATELANRTNSDPXFEVTEPPVHSRLVRRA
GWDTALEDATLFTQRDIDQGLLILEPHANLTGPNSLSDSFTFLLRADHVQPATGCLPFTI
VPPDPFXSQTFTPXVSFLVTDNLVTIGVSQEKPVVSSEPTTQTGTLGKLTQTRWPEAAPW
GRHSGEEPTLDVMASPTRVXWSPDATRASPGAPTQTRESSHPLMVIMPLSVVLFLLIVTV
VAXCVWLLGRKAEKATPLIKPQINLEPTTAGPRPERSPXVPTVTVTPLPRSSGSAPVSLF
RAPPCERMEKSPASEPAERCAPWETWMNLDPDMVKLCRQTNPALKHKQYWV
NT seq
6816 nt
NT seq
+upstream
nt +downstream
nt
atgactggccggatcactggtgggatgcacaatttgcactttcagcatggaatctacata
gcgggccacggtggacttgaagtctcatatctcgatggacagctccccaatttccgtggc
tgtatggaggatgtggtgtttaaccagagggaaatcctttcctctcttagatcttaccct
ggttttaagaaagtttatgaggtgtcactaggatgcagtgatgaattttttgcaggggag
gatgaagccatcaatttctttagctccagatcctatgtcaccttcccagagtggaaggtc
cagcgggacgggctgttggaatttgctttgcagactggaactcaacaagccttgctttta
tttcagtcaggtagggaaggagattttgttgctttggaaatagttgaaggttttttgaag
gctcatgtaggaagggataggagtgatactcagctctcttcttttagcttggttagtgac
aaccagtggcacgatattcaactcagattcactgaaagatacctgggcctgatggtggat
gaacaaagagtaagggcaaacctgccattgcagagcaaactgtttgtatctgcaggccct
ctcttcgtgggaggtcttgatagacacaagggagaagaagttaagaggttaggacttgcc
tctgtgcctgggaaatctgctggaggaatctcttttaaagggtgcttgagaggcttggaa
gccaactcagaaaagagagcattaaaggatgcctttgtttccaaagatatatctgctggg
tgtaaaatgaagggcagtgataatgaaaacccttctgcaacaaccatggagaaactgctg
ctggcagaagttcccctttccactgctgactctgaggcgggcaagcctagtcttcaagat
gtgcgtagctatttcttggtcctgaataacttggaggtccaagaaggtgggcaagcctta
ctggaacaaaggcatatgaaggtggatatggagctgaaggatttgggtatccatcagtct
cagatactctttaaaataaaggagatgcctgtttatgggttccttcgattagatgtttcc
cccgagcaaggaccggagaaagttttcactctgttggatttggagcaagggaacgtttgg
tatgtccatgacggttcagaagaacctagggattatttcacattttcagtctcttccaac
agcaagagggaagtgccactgtatctgcaaggacatgtttcttatgtgtttaacattgtt
gtcattccagtaaatgatcccccaaaccttaagctccctgaaggaaacttgcttctcgtg
tttgagaattctaagaaacgactgactccaaatatcatacatgtttcagacccagacaca
gattcctygagtcttagtgtctcagtgcttggcaacttcaattcrgatgctgggttttta
gaaaacatcaatgatccygggagagccattaatggtttctcatatggggatttaagagat
ggcaacattttctgygtgcacagaggccatccaaactcccggatccttctgagagcaaat
gatggagagctggttagcagtacggtggtgttgcgggtcatggctattccttgggacttg
gcagtggccaatcggaccggtgtggccgtacagcagggtggttcrgttctgattactcag
agcaacttgtcggtggaggttaatggtgaacgccctgaggtggacacccgttatgttatc
acttatccgcctcgctttggccaaattcagcagcaagggccaggtggcgagtggaaacaa
atcagtaccttttctcagcgttctgttgatyggagtcagatccggtactgtactacattc
aaagatttgcaactagaaaatgttatggatcactttaaatttaaagttgacatagaagga
aaaagcagygaagagctggtgtttcctattaygatacagtggctaaagtttacccttctg
aaaaatgttgcccttgagatcagtaaaataaagaggcacgtattgaattctgatcactta
caggccgtgacagagggagtggaagtasctgagcgggaactgcattttaagttactgacc
ccacctaagaaaggaaaattgctacttggcacagaagttctacagacaaactcagtcttc
agccaacaaaatattacagatggtaagataagttatgaaccacaggagaggcccagggaa
cattcacaagatagtttcaggttcttgatggttgcaaaacacacagaatcaaaaggttat
actttcagaatcaactttaaagcagagaggaggcacattattgtaacaaacagaggattg
cttgtaaaagaaggagaagggaaattaatcacaaagtcagaattatttgctcaaaccttg
gacaatcggactttccaatatacagtcaccaagagtccgcaacacgggaagctgaaactg
attcrctcttcagattctcctggraatcaggacaacattactgccttcatggatcaagac
atcctgggtgagcggctgatatatgagcacgatgactctgagacccagagtgatgaattc
ttccttgtggcctccaccgcaggaccagtccaagagggagcrttcagggatcttgacatg
gagcatctgtctatggacatcaaagtcaccrtttctgtggagttaaagaatgacgagaaa
ccagtgcgcatggtggataaggtctttcacgttgtgcggaacggccagcgcttgttgacc
ctctcagatatctgctaccatgaccctgactcagattttgacgatgggcagttgctctac
atccggcggggcatcccaaatggggacttggtgcaagccagtgacccaactcagaaactc
taccagttcaggcaagaggacctgcgggaaggacgcgtgctcttcaggcaccggggtgca
gactcagcccgctttgtgttgttcgtgacggatggtgtccactacacatcatccytcctt
gaggtcagcgtgtcagacccctacatccgtgtagtcaacaacacggggctgctcgtacag
agaggcaaagacagcagcctgacgacagccaacctcagtgtcaccacaaaccaagatgtc
agaacagaccacgasgtcgaattccgtattgtgcagctcccaaagcacggcagggtgctg
gtcagcagctcagcgcctggctcattttccatgcatgacttgaagcaagggtgtgtgatt
tacaggcatgacggtagtggmagcttcgatatgttcaacctaacggtgcgagttaaagat
acacatttatatgtgggagtctacgtgcaggtggactcagaaagccaccaacatcacacg
cgaattctgcacagcaagactcttgtggttgaagaaggaaaaccggtaaaactgagcaga
ggaaggcttcaggctgtgcacgaacaccctgttccttcagaggcagtgttcattgttaga
actccgccagtgcatggatactttcgaaggtctttaccggaggagggtagcgtgggtaca
gaggagaagttccctttgatgtttacgcagcaggatgttgatgatggttacatccattat
gtacagacaatrcctgaccaacaacaggaccgttttatactggatgttatgagtggcttc
caagctgtgagcagacttgaaatcctggtggatattgtccctaaacgtattcctctggca
gtacaaaatttcacagtccaggaaggtggctccaaggcacttccagaagactatttcaga
attccaagcaagcattttgagggacttgactgtgaatttgttctactcaaaccaccgaaa
catggttatgttgaaaattctcattttccaagagtaaagctgatgaaatttaccaggaaa
caggtagaaaatgaattgatttcctatgtgcatgatggtagcgaagcacttcttgacagt
ttcatcatctttgcaaatagctcagagcttggaaaacagagtttgccccaaactcttttt
gtgactgttgaatcagtaaatgatgaggctccagtaataacagccaataaaatcctccag
gtgtgggtgaattctgtcgctgagattacccgtgatgaactctgtgcagtggatggggac
tcctccccacaggacctggcctacttggtctctccacccagcaatggacatttggctctc
aagtccattcctggccgtagcattcagaacttcacccaggctcagatcaatgagggccag
ctagtgtttgtacacaacggagcaatgtcaggaggytttaattttcaggttactgatggt
ttgaactttgcaccacgacaaatttttagcatcacagctcgagctctgatcattagcttg
gaagtaaacagaggactgagcatcttcccaggttccgtgaagcccctttcatctcgtrac
ctgcgagctgtgaccaacgatgtggacagtgcaggaaacagaactataacctttaccgtc
atacgttcccctagactcgggaggctgctacgtgtcaattctgacaacagcacggaggac
gtttccgtgtttacgcagaatctggtgagtgaacagctgatattataccagcatatggac
tgggaaaacatgggctggaccgcggaagactctttyacgttcacagtgtcctccccgcca
gcagctctaggccctgaggagtttcatataactatttcgtatgaaattaacgaaccyggt
cggcagagtcgtctgcttgcaaatacaggagctgttgtcaaggagggagacaaagttctc
attgaccaatctaagttagatgcrtccaatctcttacttaaattgcccaaatctcagygt
tctttatacgaaatttggttccaagttacatctcttcctcaccatggaactcttatggtt
ggagagagaaatattaccaagagaaaacccaatttctctcaatatataattaatacattt
ggagtcacataccttcacgatgactctgaatcactggctgataactttacctttgctgtt
tggcccaatgaaaagagcaagtccaccatgaagccagaggccgactttcaygaagagatg
tttaacatcaccatcactcctataaatgaccaagcaccggaattaaagacaaaagggctt
cgactgcaagttctgcagggcaataggttsgttttaggacctgaaaacctaaaagtggaa
gatctagayagtcctccagaagagatcaggtatgtggtcatccrtgatcctaataatggc
tttttggcaatggcgcaccatccgcrtatacccgttcaccacttcacacaagccgacatt
gataactctcaggtgtggttcatacacgatggaagcccatcctctggggcgttttacttc
agtgtcagcgatggccaacaccgcccactstataagctcttccacctggatgtcatcccc
gtctccatcacccttgtgaacctcactgaccttcttcttccacaaggccagacaagtgtc
accatcactggcrctcacctgtcagcagtgaccaatgggaggagcccccacgtcacttac
aaggttatgcggcccctccagcatggtcatctgytcattgaagaycaggaggtcgtcagt
tttggacaggaagatctgaatttaggaaagctctcttaccacatgacaaacctcactgcc
tcagaggaccagctacagttctcactgtttacctcagaaagcaacctgacaggacaaaca
ctgggcatcagagtgcagccgttactgcgggtgtcgtcaggcctgacagttgccaacaga
gtggcccatcagctgwcaagaaaggaccttgatgctactgagcttgctaacaggactaac
agtgatcccamatttgaagtgacagaaccccctgtccacagcagacttgtacgaagagca
ggctgggacactgccttggaagatgctactctgttcactcagagggatattgaccaagga
ctgctgattcttgagccgcatgccaatctaacgggccccaacagcctcagtgactctttc
acgtttctrctcagggcagaccacgtccaaccagcgacagggtgtctccccttcaccata
gtgccacctgacccctttytttcgcagacttttacccccartgtttccttcttagtcact
gataaccttgtgactatcggtgtctctcaggaaaagcctgtggtttcctcagaacccaca
acacagacaggaactctggggaagctgacccagaccagatggccggaagcagctccctgg
ggacgacacagtggtgaagagcccactctggatgtcatggcttctcccaccagagtcayt
tggtcaccagatgccaccagagccagycctggggccccyacccagaccagggagagcagt
caccctctgatggtcatcatgccactgtcagtggtgctcttcctgctaatagtaaccgtg
gtggcctygtgtgtctggctgctgggccggaaggcagagaaggcaacacctcttattaag
ccccagatcaacctagaacccacaaccgcaggtcctaggccagagaggagcccaayggtt
cccaccgtcacagtgacgcctctcccaagaagctcyggcagtgctccagtcagtcttttc
agggccccaccatgtgaacgcatggagaagtctccagcttccgagccagcagaaagatgt
gctccatgggagacatggatgaatttggatcctgacatggtcaagctctgcagacaaacc
aacccagcactaaagcacaagcagtactgggtgtag
DBGET
integrated database retrieval system
