Bos indicus (zebu cattle): 109574987
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Entry
109574987 CDS
T04792
Symbol
OCLN
Name
(RefSeq) occludin
KO
K06088
occludin
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03272
Virion - Hepatitis viruses
biu04382
Cornified envelope formation
biu04514
Cell adhesion molecule (CAM) interaction
biu04530
Tight junction
biu04670
Leukocyte transendothelial migration
biu05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
109574987 (OCLN)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
109574987 (OCLN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109574987 (OCLN)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
109574987 (OCLN)
09158 Development and regeneration
04382 Cornified envelope formation
109574987 (OCLN)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
109574987 (OCLN)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
biu01009
]
109574987 (OCLN)
Protein phosphatases and associated proteins [BR:
biu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109574987 (OCLN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
FKBP15
HBM
DUF4164
UPF0182
Laminin_II
FapA
APG6_N
Swi5
TMF_TATA_bd
GAS
Phage_scaffold
DUF7307
Knl1_RWD_C
TgpA_N
DivIC
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
109574987
NCBI-ProteinID:
XP_019838613
UniProt:
A0A6P5DK28
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All DBs
Position
20:complement(10816649..10864451)
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AA seq
522 aa
AA seq
DB search
MSSRPFESPPPYRPDEFKPNHYTPSNDJYSGEMHVRPMLSQPAYSFYPEDEILHFYKWTS
PPGVIRILSMLVIVMCIAIFACVASTLAWDRGYGTLMGAGVNYPYAGSAFGSYGSGYGYG
YGYGYGYGTGYTDPRAAKGFLLAMAAFCFIAALVIFVTSVVRSGISRTRRYYLTVIIVTA
VLGIMMFIATIVYIMGVNPTAQASGSLYSSQIYALCNQFYTPAATGLYVDQYLYHYCVVD
PQEAIAIVLGFMVIVAFALMIFFAVKTRRKMNRYDKSNILWDKERIYDEQPPNVEEWVKN
VSAGTQDMPPPLSDYVERVDSPVAYSSNGKVNEKRPYPESSYKSTPVPEVAQELPLTSPV
EDFRQPHYSSSGNLETLSKRAPAKGRAGKSRRAEQDHYETDYTTGGESCDELEDDWIREY
PPITSDQQRQLYKRSFDTGLQEYKSLQAELDEVNKELSRLDKELDDYREESEEYMAAADE
YNRLKQVKGSADYKSKRNYCKQLKSKLSHIKKMVGDYDRRKT
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccaggccttttgaaagtccacctccttatagacctgatgaattcaaacctaat
cactacacaccaagcaatgacmtatatagtggagagatgcacgttcgaccmatgctctct
cagccagcatattccttctacccggaagatgaaattctccacttctacaaatggacctct
cctcccggagtaattcggatcctgtctatgcttgttatcgtgatgtgcatcgccattttc
gcctgtgttgcctccactcttgcctgggacagaggctatggaaccttaatgggagctggt
gttaactacccttatgcaggaagtgcctttggtagctacggaagtggctatggctacggc
tatggctacggttatggctatggaacaggctatacagatcccagagcggcaaagggattc
ctgctggccatggctgccttttgtttcattgctgcattggtgatatttgttaccagcgtt
gtaaggtcaggcatatctagaacaagaaggtattatttgactgtgataatagtgaccgcc
gtcctgggcattatgatgtttattgccacaattgtctatataatgggagtcaatccaact
gcccaggcctctgggtctctctacagttcacagatatatgccctctgcaaccagttttat
acacctgcagctactggactctacgtggatcaatatttatatcactactgtgtggtggat
ccccaggaggccattgccattgtactggggttcatggttattgtggcttttgctctaatg
attttctttgctgtgaaaactcgaagaaagatgaaccgctatgacaagtcaaatattctg
tgggacaaggaacgtatttatgatgagcagcctcccaatgttgaagagtgggttaaaaac
gtttctgcaggtacacaagacatgcctcctcccctctccgactacgtggagagagtggac
agcccagtggcctactcctccaatggtaaagtgaacgagaagcgaccgtatccagagtct
tcctataaatcaaccccggtgccggaagtggctcaggagctgccattgacttcacctgtg
gaggacttccggcagcctcattacagcagcagtggtaacttggagacgctttcaaaaagg
gctcccgcgaagggcagggcagggaagtcaaggcgggcagagcaagaccactatgaaaca
gactacacgaccggaggcgagtcctgcgatgagctggaggacgactggatcagggaatat
ccacctatcacttcagatcaacaaagacaactctacaagagaagttttgacactggccta
caggaatataagagcctacaagcagaacttgatgaggtcaataaagaactctctcgtctg
gataaagaactggatgactatagagaagaaagtgaagagtacatggctgctgctgacgag
tacaatagactgaaacaagttaagggatcagccgattacaaaagtaagaggaattactgt
aaacagttgaagagcaaattgtcacacattaagaagatggttggagattacgatcgacgg
aaaacatag
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