Bos indicus (zebu cattle): 109574987
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Entry
109574987 CDS
T04792
Symbol
OCLN
Name
(RefSeq) occludin
KO
K06088
occludin
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03272
Virion - Hepatitis viruses
biu04514
Cell adhesion molecules
biu04530
Tight junction
biu04670
Leukocyte transendothelial migration
biu05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
109574987 (OCLN)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109574987 (OCLN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109574987 (OCLN)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
109574987 (OCLN)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
109574987 (OCLN)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
biu01009
]
109574987 (OCLN)
Protein phosphatases and associated proteins [BR:
biu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109574987 (OCLN)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
HBM
DUF4164
FapA
Laminin_II
UPF0182
APG6_N
TMF_TATA_bd
GAS
Swi5
DUF6338
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
109574987
NCBI-ProteinID:
XP_019838613
UniProt:
A0A6P5DK28
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All DBs
Position
20:complement(10816649..10864451)
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AA seq
522 aa
AA seq
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MSSRPFESPPPYRPDEFKPNHYTPSNDJYSGEMHVRPMLSQPAYSFYPEDEILHFYKWTS
PPGVIRILSMLVIVMCIAIFACVASTLAWDRGYGTLMGAGVNYPYAGSAFGSYGSGYGYG
YGYGYGYGTGYTDPRAAKGFLLAMAAFCFIAALVIFVTSVVRSGISRTRRYYLTVIIVTA
VLGIMMFIATIVYIMGVNPTAQASGSLYSSQIYALCNQFYTPAATGLYVDQYLYHYCVVD
PQEAIAIVLGFMVIVAFALMIFFAVKTRRKMNRYDKSNILWDKERIYDEQPPNVEEWVKN
VSAGTQDMPPPLSDYVERVDSPVAYSSNGKVNEKRPYPESSYKSTPVPEVAQELPLTSPV
EDFRQPHYSSSGNLETLSKRAPAKGRAGKSRRAEQDHYETDYTTGGESCDELEDDWIREY
PPITSDQQRQLYKRSFDTGLQEYKSLQAELDEVNKELSRLDKELDDYREESEEYMAAADE
YNRLKQVKGSADYKSKRNYCKQLKSKLSHIKKMVGDYDRRKT
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccaggccttttgaaagtccacctccttatagacctgatgaattcaaacctaat
cactacacaccaagcaatgacmtatatagtggagagatgcacgttcgaccmatgctctct
cagccagcatattccttctacccggaagatgaaattctccacttctacaaatggacctct
cctcccggagtaattcggatcctgtctatgcttgttatcgtgatgtgcatcgccattttc
gcctgtgttgcctccactcttgcctgggacagaggctatggaaccttaatgggagctggt
gttaactacccttatgcaggaagtgcctttggtagctacggaagtggctatggctacggc
tatggctacggttatggctatggaacaggctatacagatcccagagcggcaaagggattc
ctgctggccatggctgccttttgtttcattgctgcattggtgatatttgttaccagcgtt
gtaaggtcaggcatatctagaacaagaaggtattatttgactgtgataatagtgaccgcc
gtcctgggcattatgatgtttattgccacaattgtctatataatgggagtcaatccaact
gcccaggcctctgggtctctctacagttcacagatatatgccctctgcaaccagttttat
acacctgcagctactggactctacgtggatcaatatttatatcactactgtgtggtggat
ccccaggaggccattgccattgtactggggttcatggttattgtggcttttgctctaatg
attttctttgctgtgaaaactcgaagaaagatgaaccgctatgacaagtcaaatattctg
tgggacaaggaacgtatttatgatgagcagcctcccaatgttgaagagtgggttaaaaac
gtttctgcaggtacacaagacatgcctcctcccctctccgactacgtggagagagtggac
agcccagtggcctactcctccaatggtaaagtgaacgagaagcgaccgtatccagagtct
tcctataaatcaaccccggtgccggaagtggctcaggagctgccattgacttcacctgtg
gaggacttccggcagcctcattacagcagcagtggtaacttggagacgctttcaaaaagg
gctcccgcgaagggcagggcagggaagtcaaggcgggcagagcaagaccactatgaaaca
gactacacgaccggaggcgagtcctgcgatgagctggaggacgactggatcagggaatat
ccacctatcacttcagatcaacaaagacaactctacaagagaagttttgacactggccta
caggaatataagagcctacaagcagaacttgatgaggtcaataaagaactctctcgtctg
gataaagaactggatgactatagagaagaaagtgaagagtacatggctgctgctgacgag
tacaatagactgaaacaagttaagggatcagccgattacaaaagtaagaggaattactgt
aaacagttgaagagcaaattgtcacacattaagaagatggttggagattacgatcgacgg
aaaacatag
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