Bos indicus (zebu cattle): 109576199
Help
Entry
109576199 CDS
T04792
Symbol
STAB1
Name
(RefSeq) stabilin-1 isoform X1
KO
K19020
stabilin-1
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109576199 (STAB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
biu00536
]
109576199 (STAB1)
Glycosaminoglycan binding proteins [BR:
biu00536
]
Hyaluronan
Cell surface receptors
109576199 (STAB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
EGF_STAB1-2
Xlink
EGF_Teneurin
FXa_inhibition
cEGF
EGF
EGF_MSP1_1
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
109576199
NCBI-ProteinID:
XP_019840256
UniProt:
A0A6P5DPY4
LinkDB
All DBs
Position
22:complement(49517671..49543105)
Genome browser
AA seq
2581 aa
AA seq
DB search
MAGPRGHLLLCFLALCLAGPSFFGEQKGPGPSLQTLPLGQVRSKRCDVKTKFVTHIPCTP
CPAIKKRVCPLGWIRAFPEKISQDCRYEVQLGDSLLSMSGCSLECWKDMVQKACCPGYWG
SQCYECPGGAETPCSGHGTCLDGLDGNGTCVCQENFSGSACQECRDPNRFGPDCQSVCRC
VHGVCRHGPRGDGSCLCFAGYTGAHCDQELLACQALNCPRNSQCSEEAPSCSCLPGYTQQ
GHECRASDPCRPSPCSPLAQCSVGPGGQAQCRCPENYHGDGTVCLPQDPCTTNNGGCPSN
STLCLYRKPGQASCLCKPGLVSIAHDSSAGCFAHCSAFSCDRSATCQVTPDGKTSCVCKE
GEVGDGRACYGHLLHEVQKASQTSMLLRLRVTFAMLDQGCREILSTSGPFTVLAPLVSSR
TMNASXAQQLCRQHIIAGQHMLEEAGTQAPRRWWTLAGQEITVSFSRFRKYTYKYQDQPQ
QTFTIHKANYPAANGLFHVVTALRLQPPPELPEDPKRTIGQILASNEVFSRFETILENCG
LPSFLDGPGPFTVFAPSNEAVDGLRDGRLVYLFTAGLSKLQELVRYHVYNHGQLTVEKLL
SKGRVLTMANQILAVNISEEGRILLGPEGVPLRXVDVLAANGVIHMLEGVLLPPTILPIL
PKLCNEEQHAVVAGSCVDCQALNTSTCPPNSVKLDISPEECVYIHDPTGLNVLKKGCAYY
CNQTIQKPGCCKGFFGPDCLQCPGGFSNPCYGKGNCSDGVQGSGACLCFPDYKGIACHIC
SNPNKHGDQCQEDCGCVHGLCDNRPGSGGVCQHGTCAPGFSGRFCNESTVSCGSTEQAQQ
CHPHARCVNQGGVSRCLCLDGFEGDGFSCTPSDPCSRPDRGGCSENAECVPGXRGAHHCM
CHKGWSGDGRVCVAVDECELDLRGGCHADALCSYVGPGQSRCTCKLGFAGDGYVCSPIDP
CRAGNGGCHDLATCRAVGGGQRVCTCPPDYGGDGFSCYGDILKELEANAHFSVFYQWIKG
AGITLPADSQVTALVPSESAIRRLSTEDQAFWLQPRLLPQLVRAHFLQGALSEEELARLH
GQNVSTLNPTVRWEIHNVSGRVWVQNASVDVADLLATNGVLHVLSQVLLPPRRDVLGGQG
LLQQLDSVPAFHLFRELLQRHRLVPQIEAATAYTIFVPTNRSLEAQANSSSLDSDVVRHH
VILGEALSTEALGKGGHRNSLLGPAHWLVFYNHSGQPEVNHVPLEGPVLQAPGRSLFGLS
GVLTVGSSRCLHSHAEALREKCVNCSRKFRCTQGYQLEDTPRKSCVYRSGYSFSRGCSYT
CAKKIQVPDCCPGFFGTLCEPCPGGLGGVCSGHGQCQDRLLGSGECRCHEGFHGTACEMC
ELGRYGPNCTGVCDCAHGLCQEGLRGDGSCVCNVGWQGLRCDQKISGPQCLQKCDPNANC
VQDSAAAPVCVCAAGYSGDGVSCSAVDPCARDHGGCSPHANCTTVAPGQRTCTCLDGYTG
DGELCREANSCLIRHGGCHMHAECIPTGPQQVSCSCREGYSGDGIRACVLLDPCSQNNGG
CSPYAVCKSTGDGQRTCACDAVRTVGDGFTCRARISLELLRDKHASFFSLHLLEYKDLKG
DGPFTVFVPHADLLTNMSQDELARIRANRQLVFRYHVVGCRQLRSQELLEEGYATALSGH
PLRFSEREGNIYINDFARVVSSDQEAVNGVLHFIDRVLLPPEVLHWEADAAPAPRRNFTA
AAETFGYKIFSGLVTMAGLLPLLQDSSHRPLTMLWPTDSALQALPPDRQVWLYHKDHRDK
LAAILRGHVIRNXEALASDLPNLGPLRTMHGTPISFSCSHARPGALTVGEDAARIVQRHL
PFEGGLAYGIDQLLEPPGLGARCDRFETRPLWLKVCSICGLEPPCPPGSQEQGSPEACWR
YFSKFWTSPPLHSLALRSVWTRPSHWGHPQGLGRGCYRNCVTTTWKPSCCPGHYGSECRA
CPGGASNPCNQRGSCMDGMSGSGECRCHTRFAGTACELCAPGAFGPLCQACNCTSHGRCD
EGLGGSGSCFCDEGWTGPRCEVQLELQPVCAPPCAPQAVCRAGNSCECSLGYEGDGRTCT
VVNLCQDGRGGCSEHANCSQAGTAVTCICWPDYEGDGWSCRARNPCEDGLRGGCSEHADC
LNTGPNTRRCVCHAGYVGDGLQCLLEPEPPVDRCLDRPPPCHADAVCTDLHFQEKRAGVF
HLQAPSGPYGLNFSEAEAACGAQGAVLASLLQLSAAQQLGLHLCLVGWLANGSAAHPVVF
PTADCGDGQVGVVSLGARENLSERWDAYCFRMRDVACRCRDGFVGDGTSVCNGKLLDVLA
TTANFSIFYGMLLGYANATPRGLEFLDFLDDERTYKTLFVPVDEAFTDNTTLSGPDLELH
ASNTTFLSANASQGALLPAHSGLSLVIGNLGPGNSSRAPEVPGAVVVSRVIVWDILAFNG
IIHTLASPLLAPPQAWAVVAPEAPPVAAGVGAVVAAGAVLGLVAGALYFRGRSRSAGFGF
SAFQAEDAAADDFSPWQEGTSPPLVSVPNPVFGSHEAFCEPFDDSVLEEDFPDTQRILEV
K
NT seq
7746 nt
NT seq
+upstream
nt +downstream
nt
atggcagggccccgcggccacctcttgctctgcttcctggctctctgcttggcaggcccc
agcttctttggggagcagaagggtccaggcccctcactgcaaaccctgcccctgggccag
gtccggtccaaacgctgcgatgtgaagaccaagttcgtcactcacataccctgcacccca
tgccccgccatcaagaagcgagtgtgtcccttgggctggattcgggccttcccggagaag
atctcacaggactgccgatacgaggtccagctgggggactctctgttgtccatgagcggc
tgcagcctggagtgttggaaggacatggtgcagaaggcctgctgcccgggctactggggg
tcccagtgctatgagtgccctggtggtgccgagaccccatgcagtggccacgggacctgc
ctggatggcctagacgggaatgggacctgcgtgtgccaggagaacttcagtggctcagcc
tgccaggagtgtcgggacccsaaccggtttgggcctgactgccagtcagtgtgcagatgt
gtacacggcgtgtgccgccacgggccgcgcggggatggaagctgcctgtgcttcgctgga
tacactggagcccactgtgaccaggagctgctcgcctgccaggccctgaactgtcctcgg
aactcccagtgctctgaagaggccccctcctgtagctgcctgcctggctatacgcagcag
ggtcatgagtgccgggcctccgacccctgccggccgtcaccctgctccccrcttgcccag
tgctctgtgggccctggagggcaggcccagtgtcgctgccctgagaactaccacggggat
gggacggtgtgtctgccccaggacccgtgcaccaccaacaacggcggctgccccagcaac
tccaccttgtgtctgtacaggaagcccggccaggcctcctgcttatgtaagccaggcctg
gtcagcattgcccacgacagctccgcgggctgcttcgcccactgctccgccttctcctgt
gaccgctcagccacctgccaggtgacccctgatggaaagaccagctgtgtgtgcaaggag
ggtgaggtgggggaygggcgtgcctgctacggacacctgctccacgaggtgcagaaggcc
agccagacgagcatgttactgcggctgagagtcacctttgccatgctggaccagggctgc
cgggagatcctcagcacgtcgggcccattcaccgtgctggcaccactcgtctcctccagg
actatgaacgcatccktcgcccagcagctgtgcagacagcacatcatcgccggccagcac
atgctggaggaggcggggacccaggctccacgccggtggtggacgctggccgggcaggag
atcactgtcagtttcagccgcttcaggaaatatacctacaaataccaagaccagccgcag
cagacattcaccatccacaaggctaactacccagcagccaacggcctcttccacgtcgtc
actgccttgcggttgcagcccccaccagagctccctgaggaccccaagaggaccatcggc
cagatccttgcctccaatgaggtgttcagccggtttgaaaccatcctggagaactgcggg
ttgccctccttcttggatgggcccgggcccttcacagtctttgcccccagcaatgaggca
gtggatggcttgcgggatggccgcctggtctacctcttcacggcgggtctctccaaactg
caggagctggtgaggtaccacgtctacaaccacggccagctgactgttgagaagctcctc
tccaagggtcgggtgctcaccatggcaaaccagatcctggctgtgaatatctcagaggag
gggcgcatcctgctgggacctgagggggtccccctgcggasagtagatgtgctggctgcc
aacggcgtgatccacatgctggagggcgtcctgctgcccccgaccatcctgcccatcctg
cccaagctctgcaacgaggagcagcacgcggtcgtggcgggctcctgtgtggactgccaa
gccctgaacaccagcacgtgcccccccaacagcgtgaagctggacatctctcctgaggag
tgtgtctacatccatgaccctactgggctcaacgtcctgaagaagggctgcgcctactac
tgcaaccagaccatccagaaacctggctgctgcaaagggttttttgggcctgactgttta
cagtgtcctgggggcttttccaacccctgctatggcaaaggcaactgcagcgatggggtc
cagggcagcggggcctgcctctgcttcccagactacaagggcatcgcctgccacatctgc
tccaacccgaacaagcatggagaccagtgccaggaagactgcggttgtgtccacggtcta
tgtgacaaccgtccgggcagtgggggggtgtgccagcatggcacatgtgccccaggcttc
agcggccgcttctgcaacgagtccacggtgagctgtgggtccacggagcaagcccagcag
tgccacccacatgcccgctgcgttaaccaggggggtgtctccaggtgtctctgtctggat
ggytttgagggtgacggcttctcctgcacacccagcgacccctgctcccgcccagaccgc
ggcgggtgctcggagaacgctgagtgtgtccctggggyccggggcgcccaccactgcatg
tgccacaaaggctggagtggggacggtcgtgtctgcgtggctgttgacgagtgtgagttg
gacttgcgaggcggctgccatgctgatgccctctgcagctatgtgggacccgggcagagc
cggtgcacgtgcaagctgggcttcgcgggagatggctacgtgtgcagccccattgayccc
tgccgggcgggcaacggggggtgccatgatctggccacctgccgggcagtggggggaggc
cagcgggtctgcacatgtcctcctgactatgggggtgatggcttcagctgctacggagac
atcctcaaggagctggaggcaaacgcccacttctccgtcttctaccagtggattaagggg
gccggcatcactcttcctgccgacagccaagtcacagccctggttccctcggagtctgcc
atccgtcggctgagcaccgaggaccaggccttctggcttcagccaaggctgctgccgcag
ctggtcagggcccattttctccagggcgccctgtccgaggaggagctggcccggctgcac
gggcagaatgtatccaccctgaaccccaccgtacgctgggagattcacaacgtcagtgga
agggtctgggtgcaaaatgccagcgtggacgtggctgacctccttgccaccaatggagtc
ctccacgtcctcagccaggtcttactgcctccaagaagggatgtgctgggggggcagggg
ctgctgcagcagctggactcggtgcctgccttccacctcttccgggagctgctacagcgc
cacaggctggttccccagattgaggctgccaccgcctacaccatcttcgtgccaaccaac
cgctctctggaggcccaggccaacagcagcagcctggactcggacgttgtgcgacaccac
gtgatcctgggcgaggcgctctccacagaggccctgggcaagggggggcaccgcaactcc
ctcctggggcctgcccactggcttgtcttctacaaccacagtggccagcccgaggtgaac
catgtgccgctggaaggccctgtgctgcaggcccctggccgctcgctcttcggcctgtcg
ggggtcctgacggtgggctcaagccgctgcctgcacagccacgcagaggccctgcgggag
aaatgtgtgaactgtagccggaaattccgctgcactcagggctaccagctggaggacacc
cccaggaagagctgtgtctaccggtctggctactccttctcccggggctgttcatacacg
tgtgccaagaagatccaggtgcctgactgctgccctggcttcttcggcaccctgtgtgag
ccgtgcccggggggtctgggtggcgtgtgctcaggccatgggcagtgccaggaccggctc
ctgggcagcggggagtgccgctgccatgagggcttccacggaacggcctgtgagatgtgc
gagctgggccgctacgggcccaactgcaccggagtgtgtgactgcgcccatgggctgtgc
caggagggcctccgcggggacggaagctgcgtctgcaacgtgggttggcagggcctccgc
tgtgaccagaaaatcagtggccctcagtgcctgcagaagtgtgaccccaatgccaactgc
gtgcaggactcggctgcagcccctgtctgcgtctgtgccgcggggtactcgggtgatggc
gtctcctgttcagcggtggacccatgtgcgcgtgaccatggcggctgctccccccacgcc
aactgcacgaccgtggcacctggtcagcggacgtgcacctgcctggacggctacacgggc
gacggggagctgtgccgggaagccaacagctgtctcatccgccatgggggctgccacatg
catgccgagtgtatccccacaggcccccagcaggtctcctgcagctgccgcgaaggttac
agtggggatggcatccgggcstgtgtgctcctggacccttgctcccagaacaacggaggc
tgcagcccctatgccgtgtgcaaaagcacaggggatggccagaggacctgtgcctgcgac
gcagtccgcaccgtgggggatggcttcacctgccgagcccgcatcagcctggagctgctt
cgggacaagcacgcctccttcttcagcctccatctcctggaatacaaggacctcaagggg
gacgggcctttcacagtctttgtgccgcatgcagatctgctgaccaacatgtcacaggac
gagctggcccgcattcgtgccaaccgccagcttgtgttccggtaccacgttgttggctgc
cgacagctgcgaagccaggagctgctggaggagggctatgccaccgcactctcggggcat
ccgctgcgcttcagcgagagggagggcaacatctacatcaaygactttgcacgcgtggtg
agcagcgaccaggaggctgtgaacggtgtcctgcatttcatcgaccgtgtcctgctgccg
ccggaagtgctgcactgggaagctgatgctgccccagctccgcggagaaacttcactgct
gctgcagagaccttcggttacaagatcttcagtggccttgtgacgatggctggcctcctg
cccctgcttcaagattcctcccacaggccgctcaccatgctgtggcccacagattccgcc
ctacaagccttgcctcctgatcgccaggtctggctctaccataaggaccaccgtgacaag
ctggcagccattctgcggggccacgtgatccgcaacrtcgaggccttggcatctgacctg
cccaacctgggccccctgcgcaccatgcatgggacccccatctccttctcctgcagccat
gcacggccgggcgcgctcacggtgggagaggacgccgcccgaatcgtgcagcgacacctg
ccctttgaggggggcctggcctatggcattgaccagctgctggagccgcctggccttggt
gcccgctgtgaccgctttgagacccgaccgctgtggctgaaagtttgcagcatttgtggg
ctggaacccccctgccctccgggctcacaggagcagggcagccctgaggcctgctggcgc
tacttctccaagttctggacgtcccctccgctgcactccttggccctgcgcagtgtgtgg
acccggcccagccactggggtcacccccaaggcctgggcaggggctgctaccgcaactgt
gtcaccaccacctggaagcccagctgctgccctggtcactacggcagcgagtgccgagct
tgccctggcggcgccagcaacccctgtaaccagcgcggctcgtgcatggacggcatgagc
ggcagcggggagtgcaggtgccacacgcgcttcgccggcacggcctgtgagctctgtgcc
ccgggagcctttgggcccctgtgccaagcctgcaactgyacctcccacggccgctgtgac
gagggcctggggggctccggctcctgcttctgtgatgagggctggacggggccacgctgt
gaggtgcagctggagctgcagcctgtgtgtgctccgccctgcgcaccccaggccgtgtgc
cgcgctggcaacagctgtgagtgcagcctgggctacgaaggggacggccgcacgtgcaca
gtggtgaacctgtgccaggatgggcgtggtggctgcagcgagcatgccaactgcagccag
gcrggcacagcggtcacctgcatctgctggccagactacgagggcgatggctggagctgc
cgggcccgcaacccctgtgaggatggcctccgcgggggctgcagtgagcacgccgactgc
ctgaacactgggccaaacacacggcgctgtgtgtgccacgccggctacgtgggtgatgga
ctgcagtgtctgctggaacctgagccgcccgtggaccgctgcctggaccggccgcctccc
tgtcacgcagacgccgtgtgcactgaccttcacttccaggagaagcgagctggtgtcttt
cacctccaggcccccagtggcccttatggcctgaacttctcagaggccgaggcggcttgt
ggggcccagggagctgttcttgcctctctccttcagctctctgctgcccagcagctgggc
ctccacctctgccttgtgggctggctggccaatggctcggctgcccacccygtcgtcttc
cctacggcagactgtggggacggccaggtgggcgtggtcagcctgggcgcccgggagaac
ctctcggagcgctgggacgcctactgcttccgcatgcgagacgtggcctgccgatgccgc
gatggcttcgtgggcgatgggaccagcgtgtgcaatgggaagctgctggatgtactggcc
actaccgccaacttctcmatcttctatgggatgctactgggctacgccaatgccaccccg
aggggtctcgagtttctggacttcctggatgacgagcgcacctacaagacgctcttcgtc
cctgtcgatgaagctttcaccgacaacacgaccctgagcggtccagacctggagctgcat
gcctccaacaccaccttcctgagcgccaacgcgagccagggtgccctgcttcccgcgcac
tcgggcctcagcctcgtcatcggcaacctgggcccyggcaacagttctcgggcccctgaa
gtcccaggggcagttgtggtcagccgcgtcatcgtgtgggacatcctggccttcaatggc
atcatccacactctggccagccccctgctggcgcccccgcaggcctgggcagtggtggcc
ccagaggccccgcctgtggcagcgggcgtgggggctgtggtggctgctggagccgtcctt
ggcctggtggccggagccctctactttcgtggccgaagccggtccgcrggctttggcttc
tctgccttccaggcagaagatgctgctgctgacgacttctccccgtggcaggaagggacc
agcccacctctggtctccgtccctaacccggtctttggtagccaygaggccttttgtgaa
ccctttgatgactcggtcctggaggaggacttccccgacacacagaggatcctcgaggtg
aagtga
DBGET
integrated database retrieval system
