KEGG   Bos indicus (zebu cattle): 109576321
Entry
109576321         CDS       T04792                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu03013  Nucleocytoplasmic transport
biu04141  Protein processing in endoplasmic reticulum
biu04150  mTOR signaling pathway
biu05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:biu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109576321 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109576321 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    109576321 (SEC13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    109576321 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:biu03019]
    109576321 (SEC13)
   04131 Membrane trafficking [BR:biu04131]
    109576321 (SEC13)
Messenger RNA biogenesis [BR:biu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     109576321 (SEC13)
Membrane trafficking [BR:biu04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    109576321 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    109576321 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    109576321 (SEC13)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd WD40_Gbeta WDR55 EIF3I ANAPC4_WD40 Beta-prop_NOL10_N Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_WDR41 Beta-prop_EML Beta-prop_WDR36-Utp21_1st NBCH_WD40 MIOS_WD40 PAC11
Other DBs
NCBI-GeneID: 109576321
NCBI-ProteinID: XP_019840468
UniProt: A0A6P5DQ04
LinkDB
Position
22
AA seq 322 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILVADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLTYTGLGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIK
KFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV
FVWTCDDASGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI
SDVNKGQGPVSTSVTEGQQNDQ
NT seq 969 nt   +upstreamnt  +downstreamnt
atggtgtcagtaattaacactgtggacacttcccatgaggacatgattcatgacgcccag
atggactactacggcacccgcctggcaacctgctcgtcagacaggtccgtcaagatattc
gatgtgcgcaacggggggcagatcctcgtcgccgacctcaggggccatgagggtccygtg
tggcaggtggcctgggcccaccccatgtatggcaatatactcgcgtcctgctcctacgac
cggaaagtcatcatctggaaagaggagaatggcacctgggagaagacccacgagcacaca
ggacacgactcgtcagtaaactccgtatgctgggctccccacgactayggcctcatcctg
gcctgcggcagctcggacggggccatctccctgctgacctacaccgggctgggccagtgg
gaagtaaagaagatcaacaatgctcacaccatcggctgcaatgctgtcagctgggcccct
gctgtcgtacccggaagcctcatagaccagccatccgggcagaagcccaactacatcaag
aagtttgcgtcaggcggctgtgacaacctcatcaaactgtggaaggaggaggaggacggc
cagtggaaggaagagcagaagctggaagcccacagtgactgggttcgagatgtggcctgg
gccccctccatcggcctgcctaccagcaccatcgccagctgctctcaggacggtcgggtg
ttcgtctggacctgtgacgatgcctcgggcaacacgtggtctcccaaactgctgcacaag
ttcaacgacgttgtgtggcatgtcagctggtccatcacagccaacatcctggcggtctct
ggtggagacaataaggtgaccctgtggaaggagtcggtcgaygggcagtgggtgtgcatc
agcgacgtcaacaagggccagggacccgtgtccacgtctgtcacggagggccagcagaac
gaccagtga

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