Bos indicus (zebu cattle): 109576353
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Entry
109576353 CDS
T04792
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109576353 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109576353 (CNOT10)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109576353 (CNOT10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_12
TPR_19
TPR_8
TPR_MalT
TPR_17
DUF6058
TPR_7
EMP24_GP25L
DUF948
Motif
Other DBs
NCBI-GeneID:
109576353
NCBI-ProteinID:
XP_019840506
UniProt:
A0A6P5DQL3
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Position
22:7128227..7187484
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AA seq
743 aa
AA seq
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MAADKPADQGAEKHEGPGPSSGITDQEKELSTSAFQAFTAGNYDVCLQHLTCLQDINKDD
YKIILNTAVAEFFKSNQTTTDSLRQTLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVIL
YHLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYILTYQAEKALHLLAVLEKMIS
QGNNNKNGKNETGNNTNKDGSNHKAESGALIEAAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLG
CIHFAMSKHNLGIFYFKKALQENDNVCAQLSAGSTDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHANPRLWLRLAECCIAANKGTSEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSIQNTVYNDGQSSAIPVASMEFAAICLRNALLLLPEDQQDPK
QENGSKNSNQLGGNAESGESSDACSSKSHDGDKCIPAPPSSPLRKQELENLKCSILACSA
YVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVT
DVSLGISSNEQDQGSDKGENEAMESSGKRAPQCYPSSVSSARTVMLFNLGSAYCLRSEYD
KARKCLHQAASMIHPKEVPPEAILLAVYLELQNGNTQLALQIIKRNQLLPAVKTLSEMRK
KPVFQPVHPIQPIQMPAFTVQRK
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacaagccggcagatcagggagcagagaagcacgaagggccaggcccgtcc
tctgggatcactgatcaagagaaggagttgtccaccagtgctttccaagctttcacagct
ggaaattacgatgtctgtctgcaacatcttacctgcctacaagatataaacaaagatgat
tataaaataatattgaatacagcagtagctgagttttttaaaagtaaccagacaacaaca
gatagtttgagacaaacacttaaccagctgaagaatcaggtacactcggctgttgaagaa
atggatgggttggatgatgttgaaaacagcatgttgtattacaatcaagcagtcatcctg
tatcatctgcggcagtatacagaggccatatccgttggcgaaaaactttatcagttcata
gaacctttcgaagaaaaatttgcccaagcagtgtgttttttgctcgtagacctgtatata
ttaacctaccaagctgagaaagctttacatcttcttgctgttctagaaaaaatgatttca
cagggaaacaataacaaaaatggaaagaatgagactggtaataataccaacaaagatgga
tctaatcataaagctgaaagtggagcactaatagaagctgcaaagtcaaagatacatcag
tataaagtaagagcgtatatccaaatgaaatccctgaaggcatgcaaaagggaaatcaag
tctgtcatgaatacagcggggaattcggcaccttccctgtttcttaaaagcaattttgag
tacttacgaggcaattatcgaaaagctgtgaaactgttgaatagttcaaacattgccgag
catccaggattcatgaaaacaggtgaatgcttgcggtgcatgttctggaataatcttggt
tgtatccattttgccatgagcaagcacaatttgggcattttctactttaaaaaggctcta
caggagaatgacaaygtctgtgcccagctcagtgcaggcagcactgatccaggcaaaaaa
ttctcaggaagacctatgtgtacattactaaccaacaagaggtatgagttgctgtataac
tgtgggattcagctgcttcacattggaaggccgctcgctgcatttgagtgtctgattgaa
gcggttcaggtttatcacgcaaacccccgcctctggctgcggctggctgaatgctgcatt
gctgctaataagggaacttctgaacaagaaacaaaaggtcttccaagtaaaaaaggaatt
gtacagtcyattgttggtcaaggctatcatcgtaaaatagttctggcatcacagtccatc
cagaatactgtttataatgatggacagtcttcagccattcctgtagccagtatggagttt
gcagccatttgtctccgaaatgccttgctgctgttacctgaagaccagcaagatccgaag
caggaaaatggatctaaaaacagtaatcagttaggcggcaacgcggagagcggtgagagc
agcgatgcttgcagcagtaaaagccacgatggagacaaatgcattccagctccaccttct
tccccattgagaaaacaggagttagaaaacttaaaatgctccatactsgcctgcagtgcc
tacgtggctctggctctgggtgataaccttatggctctgaatcacgcagataaacttctt
cagcagcccaagctgtcaggatctctgaagttcctgggtcatttatatgctgcagaagcc
ctcatctctctggacagaatctctgatgctattactcacttgaacccagagaatgtcact
gatgtctccttagggatctcttcaaatgagcaggaccaaggatcagacaaaggtgaaaat
gaagcaatggaatcctccgggaagcgggcccctcagtgctatcccagttccgtcagctcg
gcccggaccgtgatgctgttcaacctgggcagcgcctactgcctgcggagcgaatatgac
aaagcccgcaagtgtctccaccaggcggcctcaatgatccatcccaaagaggtgccccct
gaagccatcctgctggccgtctaccttgagctacagaatggtaatacccagctggcctta
cagatcatcaaaaggaatcagctgctccctgcagtgaaaacactctctgaaatgagaaag
aagccagtgttccagcccgtccacccgatccagcccatccaaatgccagcgttcactgtg
cagagaaagtga
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