Bos indicus (zebu cattle): 109576486
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Entry
109576486 CDS
T04792
Symbol
SYNJ1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu00562
Inositol phosphate metabolism
biu01100
Metabolic pathways
biu04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
109576486 (SYNJ1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
109576486 (SYNJ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
biu04131
]
109576486 (SYNJ1)
Enzymes [BR:
biu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
109576486 (SYNJ1)
Membrane trafficking [BR:
biu04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
109576486 (SYNJ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
RRM_1
Motif
Other DBs
NCBI-GeneID:
109576486
NCBI-ProteinID:
XP_019840996
UniProt:
A0A6P5DRW4
LinkDB
All DBs
Position
1:1935115..2026052
Genome browser
AA seq
1575 aa
AA seq
DB search
MRKRWTRRSGSDGCGGGGRGRRRRSRRKRAASEERRMAFSKGFRIYHKLDPPPFSLIVET
RHKEECLMFESGAVAVLSSAEKEAIKGTYSKVLDAYGLLGVLRLNLGDIMLHYLVLVTGC
MSVGKIQESEVFRVTSTEFISLRVDSSDEDRISEVRKVLNSGNFYFAWSASGVSLDLSLN
AHRSLQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLLRLMCGGVEIRTIYAAHKQAKACLI
SRLSCERAGTRFNVRGTNDDGHVANFVETEQVVYLDDSVSSFIQIRGSVPLFWEQPGLQV
GSHRVRMSRGFEANAPAFDRHFRTLKNLYGKQIIVNLLGSKEGEHMLSKAFQSHLKASEH
AADIQMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLDYGIFHFDGSEVQRCQSGTVRTNCL
DCLDRTNSVQAFLGLEMLTKQLEALGLAEKPQLVTRFQEVFRSMWSVNGDSISKIYAGTG
ALEGKAKLKDGARSVSRTIQNNFFDSSKQEAIDVLLLGNTLNSDLADKARALLTTGSLRA
SSKVLKSMCENFYKYSKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQ
EFQDKRSKPMDIFAIGFEEMVELNAGNIVNASTTNQKLWAAELQKTISRDNKYVLLASEQ
LVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAA
GQSQVKERNDDFVEIARKLSFPMGRLLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWD
SLIAGDQLINQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRR
RKWPFDRSAEDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALIDIDIFE
VEAEERQNIYKEVIAVQGPPDGTVLVSIKSSLPENNFFNDALIDELLQQFTNFGEVILIR
FVEDKMWVTFLEGSSALNVLNLNGKELLGRTITITLKSPDWIKTLEEEMSLEKINVPLPS
STSSTLLGEDAEVTADFDMEGDVDDYSAEVEEILPQHLQPSSSSGLGTSPGSSPRTSPCQ
SPTISEGPVPSLPVRPSRAPSRTPGPPASQSSPVDTLPATQLQQKDSSQTLEPKRPPPPR
PVAPPARPAPPQRPPPPSAPKSPGTTRRDNLGRSQLPPQAGLPGPGLAGHSAARPIIPPR
AGVISAPQSHARVSAGRLTPESQSKTSEVLKGPALLPEPLKPQAALPVPPSLAPPSLAPP
VQKMQEPLIPVAAPLAQAALQPSLETPPQPPPRSRSSHSLPSEPPAQPQVKTNGVSAVRL
DSPLKSDPFEDLSLNLLAVSKAQPSVHTPNPRGLTPLPSAAPSNTNTLSSVSCMPTMPPI
PARSKSQENTRCSPNPFIPSSSSTNPFTDRTAAPGNPFRAESQESEATSWFSKEEPVAPS
PFSSLRPLDQNSSKPSSSLDGFKDSFDPQGLSALTVSNPKGWVTFEEEEDFGVTGKSGST
RPDVFLGKQLSSSPGSKVMLGDDWGRSTNVSLCVLPARPPPPPPVPLLPPGTTPPADAFT
ALASKASPTLDLTER
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagagatggacgcgccggagcggaagtgacggttgcggcggcggcggccgcgga
aggaggaggaggagccggaggaagagggctgcctccgaagaaaggagaatggcgttcagc
aaaggatttcggatctatcacaaattggatcccccacctttcagcctcatagtggaaacc
aggcataaggaagaatgtctcatgttcgagtctggggctgtagcggtgctctcatcagca
gaaaaagaggcaatcaagggtacatactccaaagttctagatgcctatggacttttaggt
gttttacgattaaatcttggtgatattatgttacattatctggtcctagtcactggatgt
atgtctgttggaaaaattcaagaatctgaagttttccgagttacttccactgaatttata
tcactgcgagttgattcttcggatgaggatcgcatttcggaagtgcgaaaagttttaaat
tcaggaaacttttattttgcatggtctgcatccggagtcagtttggatctgagtcttaat
gcccaccgtagcttgcaagaacacacaactgacaatagatttttctggaatcagtctttg
cacttgcatctcaagcactacggtgtgaattgtgacgactggttattacgcctcatgtgt
gggggagtagaaatcagaacaatttatgctgctcataaacaggcaaaggcttgcctcatt
tccagactaagctgtgaacgagctgggaccaggtttaacgtccggggaacaaatgatgat
ggtcacgttgccaattttgtagaaacagaacaggttgtgtacttagatgactctgtttct
tccttcatacaaatccggggatctgtcccattgttctgggagcagccaggattgcaggtg
ggatctcatcgtgtccgtatgtcaaggggatttgaagccaatgcacctgcttttgacagg
cattttaggacacttaagaatttgtatggtaaacaaataatagtaaatctgcttggatct
aaggaaggtgaacatatgctaagtaaggctttccagagtcatctgaaagcttctgaacat
gctgctgatatccagatggtgaattttgactatcatcaaatggttaaaggaggaaaggca
gaaaaattacatagtgttcttaaacctcaagtccagaagtttctggattatggaattttt
cattttgatggaagtgaagttcaaaggtgccagagtggtacagttcgaacaaactgcttg
gattgtcttgacagaacaaatagtgtgcaggcattccttggtttagagatgctgactaaa
cagttggaagctcttggtttagctgaaaagcctcagttggtgactcgctttcaagaagtt
tttcgatcaatgtggtctgtgaatggtgattcaatcagtaagatttatgcaggaactgga
gcccttgaaggaaaggctaagttaaaagatggtgctcgttcagttagtagaacaattcag
aataacttctttgacagctccaagcaagaagcaattgatgttttgctcctgggaaatact
ctaaatagtgatttagctgacaaagctcgagcccttttaactactggaagtttgcgtgca
tcttctaaagtactaaagagtatgtgtgagaatttctacaagtattcaaagcccaagaaa
attcgagtatgtgtgggcacatggaacgtgaatggcgggaagcagtttcgcagcatagct
tttaagaatcagacccttacggactggcttcttgatgcccccaagttagctggcatccag
gagtttcaagataaaagaagtaaaccaatggatatatttgcaattggttttgaggaaatg
gtagagctgaatgctggaaacattgtgaatgcaagcacaacaaatcagaagctctgggct
gcggaacttcagaagaccatctccagagacaacaagtatgtgctgctggcctctgagcag
ttggtgggcgtctgtctgtttgtttttatcagaccacagcacgctcccttcatcagggat
gttgcagttgatactgtgaaaactggaatgggaggcgcaactggaaataagggagcagtt
gcaatacgaatgctgttccacaccacaagcctctgctttgtctgcagccacttcgctgcg
ggacaatcccaagtcaaagaacgaaatgatgattttgtagaaatagcgcggaagttgagt
tttccaatgggaaggctgctcttctcccatgactatgtgttttggtgtggcgatttcaac
taccgaatcgatctccctaatgaggaagtgaaagagcttatcagacagcaaaactgggat
tctcttatcgcaggagatcagcttatcaatcagaaaaatgctggacagatttttagagga
tttttagaaggaaaagtgacctttgctccaacgtataaatacgacttgttttctgatgac
tacgacactagtgaaaagtgccgcacccctgcatggacagaccgtgtcctctggagaaga
cggaagtggccttttgatagatcagctgaagatttagatctcctaaatgctagttttcaa
gatgaaagcaaaatcctctacacatggactcctggcactttgctgcactacggaagggct
gagctgaagacttctgaccataggcctgttgttgccctgatcgatattgatatatttgaa
gttgaagctgaagagaggcaaaacatttataaagaagtaattgcagttcagggtccacca
gatggtacggtgttggtctcaatcaaaagctctttaccagaaaataattttttcaacgat
gctttgattgatgagcttttacagcagtttacaaatttcggtgaagttatactcataaga
tttgtggaagataaaatgtgggttacgtttttagagggaagctctgccttgaatgttctg
aacctgaatgggaaagagttactgggtaggacaataacaattactttaaaaagtccagac
tggatcaaaactttggaagaagaaatgagcttagagaaaatcaacgtccccttgccatca
tcaaccagctccaccctcctaggtgaagacgcggaggtcacggccgacttcgatatggaa
ggtgatgtggatgactatagtgctgaggtagaggagatccttcctcagcatctccagccg
tcttccagttctggccttggcacgtcccccggttcttcaccccggaccagtccctgccag
tcacctaccatatcggaggggcctgtgccttccctcccagtgagaccaagtcgagctccg
tccagaacgcccgggccccctgcttcacaaagttctcctgttgacactctgccggcaaca
cagctgcagcagaaagattcttcccagaccctggaacccaagcggcctccccctccccgc
ccggttgctcctcctgcacgtccagctcctccacaacgaccacctccgccttcagcaccc
aaaagcccaggaacgacccggagagataatctaggacgcagccagcttccacctcaagcc
ggactgccaggcccgggacttgctggacacagtgcagccagaccgattattccgccccgt
gctggagtcatcagcgccccccagagccacgcacgggtgtctgctgggagactgactcct
gaaagccaaagcaaaacctcagaagtactgaaagggccagctcttcttcccgagcccctg
aagcctcaggccgcccttcctgtgccgccttctcttgcgccaccttctcttgcgccacct
gttcagaagatgcaggagcctctcatcccggtggccgcacctctggcccaggctgccctg
cagcccagcctggaaacgcccccgcagccaccccctcggagcaggtcgtcccacagcttg
ccttctgagcctccggcgcagccgcaggtgaaaacaaacggagtctcygccgtcagactg
gactcgccattaaagagtgacccatttgaagacttgtcattgaacctgcttgctgtatca
aaggctcagccatctgttcacaccccaaacccaagggggttgacgccgttgccttctgca
gccccaagtaacaccaacactctgagttctgtaagctgcatgccgacaatgcctccaatt
ccagcccggagtaaatcccaggaaaacacgcgatgttccccaaacccattcatcccaagc
tcragcagcacaaatcctttcaccgacaggaccgccgctcctggaaacccctttcgagct
gagtctcaagaatcagaggccacttcatggttctccaaagaagagcctgttgctccgagt
ccattctcttcgctgaggcctctggatcagaacagtagcaagccttcatcctccctggat
gggtttaaggacagttttgatccacagggcctgtctgcactaacagtcagcaaccccaaa
ggatgggtaaccttcgaggaagaagaggactttggtgtgacagggaagtcagggtccact
cgcccagacgttttcctgggtaagcagctgagctcgtctcctggctccaaggtgatgctt
ggtgatgactggggtaggagtaccaatgtgtctctctgtgtgttgccagcaagaccacca
cccccaccgcctgtccctctgctcccacctggcaccacccctcccgcagacgctttcaca
gccctggcctctaaggcatcacccacgctagacttgacagaaagataa
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integrated database retrieval system
