Bos indicus (zebu cattle): 109576548
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Entry
109576548 CDS
T04792
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta
KO
K08525
retinoid X receptor beta
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03320
PPAR signaling pathway
biu04659
Th17 cell differentiation
biu04919
Thyroid hormone signaling pathway
biu04920
Adipocytokine signaling pathway
biu04928
Parathyroid hormone synthesis, secretion and action
biu05200
Pathways in cancer
biu05202
Transcriptional misregulation in cancer
biu05207
Chemical carcinogenesis - receptor activation
biu05216
Thyroid cancer
biu05222
Small cell lung cancer
biu05223
Non-small cell lung cancer
biu05226
Gastric cancer
biu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
109576548 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
109576548 (RXRB)
03320 PPAR signaling pathway
109576548 (RXRB)
04919 Thyroid hormone signaling pathway
109576548 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
109576548 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
109576548 (RXRB)
05202 Transcriptional misregulation in cancer
109576548 (RXRB)
05207 Chemical carcinogenesis - receptor activation
109576548 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
109576548 (RXRB)
05216 Thyroid cancer
109576548 (RXRB)
05222 Small cell lung cancer
109576548 (RXRB)
05223 Non-small cell lung cancer
109576548 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
109576548 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
biu03000
]
109576548 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
biu03310
]
109576548 (RXRB)
Transcription factors [BR:
biu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
109576548 (RXRB)
Nuclear receptors [BR:
biu03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
109576548 (RXRB)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
109576548
NCBI-ProteinID:
XP_019840740
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All DBs
Position
23:complement(7654849..7661574)
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AA seq
575 aa
AA seq
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MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPVPCPRGGAARGRFRS
PSGGRRRLGSPAVPGAGPQSSSLRTLDVGSLPLGDPRLIFSFCLSCLCVSVPVCTLPRPP
DSRSPDSSSPNPLPQGAAPPSPPGPPLPPSAAASLGGSGAPPPPSMPPPPLGSPFPVISS
SMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPPVLGVRGLHCPPPPGGP
GAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQ
YCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPVDRILEAEXAVEQKSDQG
VEGPGGXGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQVILLRAGWNE
LLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTEL
GCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRS
IGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctgcgcgcccgcccttcctcccccagcggcatgccgcagggcagtgtggg
ccggtgggggtgcgaaaagaaatgcattgtggggtcgcgtcccggtggcggcggcggcgg
ccctggctggatcccgtgccctgcccccggggcggggcggccagggggcgcttccgctct
cccagtggcggccgccggaggctcggctcccccgcggtccccggcgcagggccccagtcc
tcgagcctgaggaccctggacgttgggagtctcccgttgggtgatccaagactcattttc
tctttttgtctctcctgtctctgtgtgtctgtgcctgtgtgtaccctccctcgcccccca
gactcccggagcccagacagttcctccccaaatccccttccccagggggccgctccccct
tctcctccaggaccacccttgcccccttcagcagctgcgtcccttggaggttctggggct
ccaccaccaccctcgatgccacccccaccactgggctcccccttcccagttatcagctct
tccatggggtcccccggcctgccccctccagctcccccaggattctccgggcctgtcagc
agtccccagattaactcaacagtgtcgctccctgggggtgggtctggcccccctgaagat
gtgaagccaccagtcttaggggtccggggcctgcactgtccaccccctccaggtggccct
ggggctggcaaacggctatgtgcaatctgcggggaccgaagctcaggcaaacactacggg
gtttacagctgcgagggctgcaaaggcttcttcaagcgcaccatccgtaaggacctgacc
tactcgtgccgggacaacaaggactgcacggtggacaagcgccagcggaaccgctgtcag
tactgccgctaccagaagtgcctggctactggcatgaagagggaggctgtacaggaggag
cgtcagcgggggaaagacaaagacggggatggggagggtgctgggggagcccccgaggag
atgcctgtggacaggatcctggaggcagagyttgctgtggagcagaagagcgaccagggc
gtggagggtcccggggggwscgggggcagcggcagcagcccaaatgaccctgtgaccaac
atctgccaggcagctgacaaacagctcttcacgcttgttgagtgggcaaagaggatcccc
cacttttcctccttgcctctggatgaccaggtcatattgctacgggcagggtggaacgag
ctgctcatcgcctccttctctcaccgatccatcgatgtccgagacggcatcctcctcgcc
acaggtctccacgtgcaccgcaactcagcccattccgcaggcgtgggagccatcttcgat
agggtgctgacagagctagtgtccaaaatgcgggacatgaggatggacaagacagaactt
ggctgcctgcgggcaatcattctgttcaatccagatgccaagggcctctccaaccccagc
gaggttgaggtcctgcgagagaaagtatatgcatccctggagacctactgcaaacagaag
taccctgagcaacagggccggtttgccaagctgctgctgcgtcttcctgctctcaggtcc
ataggccttaagtgtctagagcatctgtttttcttcaagctcatcggcgacacccccatc
gacaccttcctcatggagatgcttgaggctccccaccaactggcctga
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