Bos indicus (zebu cattle): 109576587
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Entry
109576587 CDS
T04792
Symbol
VPS52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
biu04131
]
109576587 (VPS52)
Membrane trafficking [BR:
biu04131
]
Protein recycling
Others
EARP complex
109576587 (VPS52)
Endosome - Golgi transport
Tethering complex
GARP complex
109576587 (VPS52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Dor1
Sec3_C-term
COG6_N
ATG16
Motif
Other DBs
NCBI-GeneID:
109576587
NCBI-ProteinID:
XP_019840782
UniProt:
A0A6P5DUV9
LinkDB
All DBs
Position
23:complement(7721929..7739970)
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AA seq
723 aa
AA seq
DB search
MAAAATMXXAARELVLRAGASDMEEEEGPLGSGPGLREPLQIGELDITSDEFILDEVDVH
IQANLEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYIQESENIASLHNQITACD
AVLERMEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQAVRGKLGELVDGLVVPSA
LVTAILEAPVTEPRFLEQLQELDAKAAAVREQEARGTAACADVRGVLDRLRVKAVTKIRE
FILQKIYSFRKPMTNYQIPQTALLKYRFFYQFLLGNERATAKEIRDEYVETLSKIYLSYY
RSYLGRLMKVQYEEVAEKDDLMGVEDTAKKGFFSKPSLRSRNTIFTLGTRGSVISPAELE
APILVPHTAQRGEQRYPFEALFRSQHYALLDNSCREYLFICEFFMVSGPAAHDLFHAVMG
RTLSMTQKHLESYLVDCYDAIAVFLCIHIVLRFRNITAKRDVPALDRYWEQVLALLWPRF
ELILEMNVQSVRSTDPQRLGGLDTRPHYITRRYAEFSSALVSINQTIPNERTMQLLGQLQ
VEVENFVLRVAAEFSSRKEQLVFLINNYDMMLGVLMERAADDSKEVESFQQLLNARTQEF
IEELLSPPFGGLVAFVKEAEALIERGQAERLRGEEARVTQLIRGFGSSWKSSVESLSQDV
MRSFTNFRNGTSIIQGALTQLIQLYHRFHRVLSQPQLRALPARAELINIHHLMVELKKHK
PNF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgctgcgaccatgnnnncagctgctcgtgagctggtgttgcgggccggggcc
tcagatatggaggaggaggagggcccgctggggagtggtccaggtcttcgggagccattg
cagattggagagttggacatcacctctgatgaattcatcctggatgaagtggatgttcac
attcaggcaaatctggaggatgagttagtaaaggaagctcttaaaacgggtgtggatctt
cgtcactattcaaagcaggttgagctggagctacagcagattgagcagaagtccattcgg
gattatatccaagagagtgagaacatagcatctttgcacaatcagatcacagcctgcgat
gctgtccttgagcgcatggagcagatgttgggagcttttcagagtgatctcagctccatc
agctctgagatccggacactgcaggaacagtctggagccatgaacattcgactgcggaac
cggcaggctgtccgggggaaactcggggagcttgttgatggtctcgtggtgccctctgct
ctggtcacggcaattttggaggcaccagtcacagagccccggttcttggagcagctgcag
gagctggatgctaaggcagctgcagtccgagaacaggaggctaggggcacagcggcctgt
gcagatgtccggggcgtgctcgaccgcctccgagtcaaggctgtgacgaagatccgagag
ttcatccttcagaagatttattcyttcagaaagccaatgaccaactatcagatcccacag
acagccttgctgaaatacaggttcttctatcagttcctgctgggcaacgaacgcgccact
gcgaaggaaatcagggacgagtacgtggagacgctgagcaagatatacctrtcttactac
cgctcctacctggggcggctcatgaaggtgcagtatgaggaagtcgctgagaaggatgac
ctaatgggcgtggaagatacagccaagaaaggattcttctcaaagccatccctccgcagc
aggaacaccatcttcaccctggggacccggggctctgtcatctcccccgctgaactggaa
gcccccatcctcgtgccccacactgcccagcgcggggaacagaggtatcctttcgaggcc
ctcttccgcagccagcactacgccctcctcgacaactcctgccgtgaatacctcttcatc
tgtgagttcttcatggtgtcyggcccggctgcccacgatctgttccatgctgtcatgggc
cgcaccctcagcatgacccagaaacacctggagtcttacctcgttgactgttacgatgcc
atcgctgttttcctctgcatccacatcgtcctccggttccgcaacatcacagccaagagg
gacgttcctgccctggacaggtactgggaacaggtgcttgccttgttgtggccacggttt
gaactsatcctggagatgaacgtccaaagtgtccgcagcactgaccctcagcgcctcgga
gggctggacactcggcctcactatatcacgcgccgatacgcagaattctcctcggctcty
gtcagcatcaatcagacgattcccaacgaacggaccatgcagctgctgggccagctccag
gtggaggtggagaattttgtcctccgggtggcagctgagttctcctcgaggaaggagcag
cttgtgtttctgatcaacaactatgacatgatgctgggygtgctgatggagcgggcggcg
gatgacagcaaagaggttgaaagtttccagcagctgctcaacgcgcggacacaggaattc
attgaagagttgctgtcgcccccctttggggggctggtggcatttgtaaaggaagctgaa
gctttgattgagcgaggacaagcggaacgacttcgaggggaagaagcccgggttactcag
ctgatccgtggcttcggcagttcctggaaatcgtcggtggagtctctgagtcaggatgtg
atgcggagcttcaccaacttcagaaatggaaccagcatcatccagggagctctgacccag
ctgatccagctctatcatcgcttccaccgrgtgctgtctcagccgcagctgcgagccctc
cctgcccgggccgagctcatcaacatccaccacctcatggtggaactcaagaagcacaag
cccaacttctga
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