Bos indicus (zebu cattle): 109576847
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Entry
109576847 CDS
T04792
Symbol
TNXB
Name
(RefSeq) tenascin-X
KO
K06252
tenascin
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04151
PI3K-Akt signaling pathway
biu04510
Focal adhesion
biu04512
ECM-receptor interaction
biu05165
Human papillomavirus infection
biu05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
109576847 (TNXB)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109576847 (TNXB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109576847 (TNXB)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
109576847 (TNXB)
09172 Infectious disease: viral
05165 Human papillomavirus infection
109576847 (TNXB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
biu00536
]
109576847 (TNXB)
Glycosaminoglycan binding proteins [BR:
biu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109576847 (TNXB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
DUF4959
Fn3_Dep-1_2nd
Motif
Other DBs
NCBI-GeneID:
109576847
NCBI-ProteinID:
XP_019841037
UniProt:
A0A6P5DVN2
LinkDB
All DBs
Position
23:27057185..27073341
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AA seq
1483 aa
AA seq
DB search
MNLYGFHDRQRVGPVSTVGLTVSEKDQEMTPAPTDLPTAAPEPPIKPRLGELXVTDATPD
SLSLSWTVPEGQFDHFLIQYKNGDGQPKXVRVPGDEDEVTISGLEPDHKYKMNLYGFHDR
QRVGPXSVIGVTTAEEETPGPTEMEQTPSPTEVEETPGPTEXEETPSPTEPSTEAPEPPE
EPLLGELTVTGSSPDSLSLSWTVPQGHFDSFTIQHKGRDGPQVVRVGGEETEVTIGGLEP
GRKYKMNLYGLHSGQRVGPVSTVGVTAPDYDAMTTQTPSTXVPEPPTKPRLGEVTVTDAT
PDSLSLSWTIPEGQFDHFLVQYKNGDGQPKAVRVPGDEDGVTISGLEPDHKYKMNLYGFH
DHQRVGPVSVIGVTTAEEETPSPTXMEETPSPTEPSTEAPEPPEEPLLGELTVTGSSPDS
LSLSWTVPQGHFDSFTVQYKGRDGPQVVRVGGEETEVTVGGLEPGHKYKMHLYGLHGGRR
VGPASTVGVTASLTTERPLAPRLGELAVAVVTSDTARLSWTVEQGPFDSFLVQYKDVQGQ
PQAVPVAGDLREVTVSSLAPGRKYKFLLFGLRDEKRHGPVSADAKTLPDTKPAPRLGELT
VTDVTPDSVGLSWTVPEGEFDSFVVQYKDRDGQPRVVPVAADQREVTVPGLEPXRKYKFL
LYGLVGRKRLGPISAEGSTAPLEKERQPPPRLGELTVTDETPNSLRLSWTVAQGRFDSFV
VQYRGTDGQPRMVPVAADQREFTVEGLEPGRKYKFLLYGLLGGQRLGPASVLGMTAPEED
TPAPWHAATEAPKPPEGPRLGVLAVRDVSPDSLRLSWSVVQGPFDSFVVQYQDTDGQPQA
LLVGGDQNKVLVSGLEPSTSYEFFLYGLHEGKRLGPVSAEGTTGPVPAGQTPGEPGPRLS
HLSVTDVTTSSLRLNWEAPPEAFDSFLLRFGVPSPSTLEPQLRPLLQRELTVPGTRRSAV
LRDLHPGTLYTLTLYGLRGPHKADSIQGTARTLSPVLESPRDLQFSEIRETSARVSWTPP
TSRVDGFKVSYQLADGGEPQSVQVDGRTQKLEGLIPGAQYEVTVXSVRGFEESEPLTGFL
TTVPDGPTHLRALNLTDESALLHWKPPQTPVDTYDVKVTAPGAPSLQASAPGSAVDYPLQ
GLVTHTNYTATLRGLRGPNFTSPASITFTTGLEAPQDLEAKEVTPRTALLTWTAPEVSPT
GYLLSFNTPGGQTQEILLPGGVTSHQLRGLFPSTPYSTWLRAMWGDSFTPPVSTSFTTGG
LRIPFPRDCGEEMQNGVSTSRTTTIFLNGNRERPLNVFCDMETDGGGWLVFQRRMDGKTD
FWRDWEDYAHGFGNISGEFWLGNEALHSLTKAGDYSLRVDLRAGDEAVFAQYDSFQVDSA
DEYYRLHLEGYHGTAGDSMSYHSGSVFSARDRDPNNLLISCAVSYRGAWWYRNCHYANLN
GLYGSTVDHQGVSWYYWKGFDFSVPFTEMKLRPRSYRPLGRGX
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atgaacctrtacggcttccacgaccgccarcgcgtgggccccgtctccactgtcggttta
actgtctcagaaaaagaccaagaaatgactccagccccaacagacctgcccactgcagct
cctgagcctcccatcaagccmcgcctgggggagctggyggtgacagacgccacccccgac
tccctgagcctctcctggaccgtccctgaaggccagttcgaccacttcctgatccagtat
aagaacggggacgggcaacccaaggyggtgagggtccctggggacgaggacgaggtcacc
atctcaggcctggagccagaccacaagtacaagatgaacctgtatggcttccacgaccgg
cagcgtgtgggccccrtctctgtcatcggggtgaccactgcagaagaagagacccctggc
cccacagagatggagcagacccccagccccacagaggtggaggagactcccggccccaca
gagrtggaggagacccccagccccacagaacccagcacagaggccccggagccccccgag
gagcccctccttggggagctgacggtgacaggatcctccccagactcgctgagcctctcc
tggacygtcccccagggccacttygattcctttactatccagcacaagggcagggatggg
ccccaggtggtgcgtgtcgggggtgaggagactgaagtgaccattgggggcctggagcct
ggacgcaagtacaagatgaacctgtacggcctgcacagcgggcagcgcgtgggccccgtg
tccactgtgggcgtgaccgctccagactatgatgccatgaccacccaaaccccgtccacc
kcggtcccygagcctcccaccaagccccgcctgggggaggtgaccgtgacagatgccacc
cccgactctctgagcctctcctggaccatccccgagggccaattcgaccacttcctggtc
cagtataagaatggagacgggcagcccaaggcggtgagggtgcccggggacgaggayggg
gtcaccatctcgggcctrgagccagaccacaagtacaagatgaacctgtatggcttccat
gaccaccagcgtgtgggccccgtctctgtcatcggggtgaccactgcagaggaagagacs
cccagccccacaragatggaggagacccccagccccacagaacccagcacagaggccccg
gagccccccgaggagcccctccttggcgagctgacggtgacaggatcctccccggactcg
ctgagcctctcctggactgtcccccagggccactttgactccttcaccgtccagtacaag
ggcagggacgggccccaggtggtgcgtgttgggggcgaggagactgaggtgaccgttggg
ggcctggagcctggacacaagtacaagatgcacctgtacggcctgcacggggggcggcgc
gtgggccccgcgtccaccgtgggcgtgaccgcctccctgactacggagcgccccctggca
ccccgcctaggggagctggcggtggcagtcgtgacctcggacacagcgcgtctctcgtgg
acggtggagcaggggccctttgactccttcctggtccagtacaaggatgtacaggggcag
ccccaggcagtgcccgtggctggagacctccgagaggtcacagtttcgagtctggccccc
ggccgcaagtacaagttcctcctgttcggactccgggatgagaaacgacacggcccagtt
tctgcagatgcaaagactctcccagacacaaaacctgctccccgcctgggggagctgacg
gtgacagatgtgaccccggactccgtgggcctctcctggacagtccccgagggtgaattc
gactccttcgtggtccagtacaaggacagggacgggcagccccgcgtggtgcctgtggct
gccgaccagcgcgaggtcaccgtccccggcctggagcccartaggaaatacaagttcctg
ctctatgggctggtaggcaggaaacgactgggccccatttccgctgaaggcagcacagcc
cccctggagaaggaacgacagcccccaccccgcctgggggagctgacagtgacagatgag
accccaaactccctgcgcctctcatggacggtggcccagggccgctttgactccttcgtg
gtccagtacaggggcacagacgggcagccccggatggtgcctgtggctgcagaccagagg
gagttcactgtagagggcctggagcctggcaggaaatacaagtttctgctctacgggctc
ctcggaggacagcgcctgggccctgcctctgtcctgggaatgacagccccagaagaggac
acaccagcgccctggcacgcagccacggaagcccccaagccccctgaagggccccgccta
ggggtgctggcagtgagggatgtgtccccggactccctgcgcctctcctggagcgtggtc
cagggcccctttgactccttcgtggtccagtatcaggacacagatgggcagccccaggcc
ttgctcgtggggggcgaccagaacaaggtcctcgtgtcaggcctggagcccagcacctcc
tacgagttcttcctctacggcctccacgaagggaagcgcctggggcccgtctcagctgag
ggcaccacagggccagttcctgcgggtcagacgcccggagagccagggcccaggctgtct
cacctgtcggtgactgatgtgaccacgagttcactgaggctcaactgggaggccccaccc
gaggccttygactccttcctgctccgcttcggagtcccatctccaagcaccctggagccg
cagctacgtcccctgctgcagcgggagctgacggtgccagggacacggcgctcggccgtg
ctgcgggacctgcatccagggaccctatacacccttacattgtacgggctgcgtgggccc
cacaaggccgacagcatccagggcacagcccggaccctcagcccagttctagagagcccc
cgtgacctccaattcagcgaaatcagggagacctcagccagggtcagctggacacccccg
acatccagggtggatggcttcaaagtctcctaccaactggcagatggaggggagccacag
agtgtgcaggtggatggccggacccagaaactcgaggggctgatcccaggagctcaatac
gaggtgactgtgstctccgtccgtggctttgaggagagtgagcctctcacaggcttcctg
accacagttcctgatggccccacccatctgcgggcactgaacctgactgatgaatccgcc
ctgctgcactggaagcccccccagaccccggtggatacctatgatgtcaaggtcacagcc
ccaggggccccttccctccaggcttcagcccctggcagcgccgtggactaccccctgcag
ggcctggtgacccacaccaactacacggcaaccttgcgtggccttcggggccccaacttc
acctccccagccagcatcaccttcaccacagggttggaggcaccccaggacttggaagcc
aaggaagtgaccccccgcacagccctgctcacttggacggcacctgaagtctccccaact
ggttacctgctcagcttcaacaccccagggggacagacccaggagatcctgctcccagga
ggggtcacctctcaccagctccgcggcctctttccttccaccccctacagcacatggctc
cgggccatgtggggcgacagcttcactccccccgtgtccacttccttcaccactggtggs
ctgcggatccccttcccccgggactgtggggaggagatgcagaacggggtcagcacatca
aggaccaccaccatcttcctcaatggcaaccgcgagcgacccctgaacgtgttttgtgac
atggagaccgatgggggtggctggctggtattccagcgccgcatggatggaaaaacggac
ttctggagggactgggaggactacgcccatggttttgggaatatctctggggagttctgg
ctgggcaatgaggccctgcacagcctgaccaaagccggcgactactccttgcgcgtggac
ctgcgggctggggacgaggctgtgtttgcccagtacgactccttccaagtggactccgcc
gatgagtactaccgcctccacctggaaggctaccatggcaccgcaggggattccatgagc
taccacagtggcagtgtcttctctgcccgggaccgagaccccaacaacttgctcatctct
tgtgccgtctcttaccgaggggcctggtggtacaggaactgccactatgccaacctcaac
gggctttatgggagcacagtggaccaccagggagtgagctggtactactggaagggcttc
gatttctcagtgcccttcacggaaatgaagctgagaccaagaagctaccggcccctgggc
aggggagrctga
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