Bos indicus (zebu cattle): 109576979
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Entry
109576979 CDS
T04792
Symbol
KDM1B
Name
(RefSeq) lysine-specific histone demethylase 1B
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
biu03036
]
109576979 (KDM1B)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
109576979 (KDM1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
DAO
Pyr_redox_2
Pyr_redox
Thi4
HI0933_like
Pyr_redox_3
FAD_binding_3
SWIRM
Lycopene_cycl
NAD_binding_9
FAD_binding_2
FAD_oxidored
GIDA
AlaDh_PNT_C
2-Hacid_dh_C
NAD_binding_7
zf-RING_2
KARI_N
TrkA_N
YjeF_N
Shikimate_DH
Motif
Other DBs
NCBI-GeneID:
109576979
NCBI-ProteinID:
XP_019841193
UniProt:
A0A6P5DSD6
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All DBs
Position
23:complement(39760671..39802702)
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AA seq
820 aa
AA seq
DB search
MATSRGRTKKKASFDHSPDSLPLRSSGRQAKKKATETTDEDEDGGSEKKYRKCEKAGCTA
TCPVCFASTSERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYDKYTTWKKIWTSN
GKTEPSPKAFMADQQLPYWVQCTKPECRKWRQLTKEIQLTPQIAKTYRCGMKPNTAVKPE
TSDHCSLPEDLRVSEVPNHWWYSMLILPPLLKDSVAAPLLSAYYPDCVGMSPSCTSTHRV
TSDASPGKLEHPKAVPSVLVPGMNRYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSR
DPTMYLALRNLVLALWFTNCKEALTPQKCIPHIIVRGLVRIRCVQEVERILYFMTRKGLI
NTGVLSVGPDQHLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVW
DDKSFTGVTVGRGAQIVNGCVNNPVALMCEQLGISMHKFGERCDLIQEGGRITDPTIDKR
MDFHFNALLDVVSEWRKDKTQLQDVPLGEKIEEIYKAFIKESGIQFSELEEQVLQFHLSN
LEYACGSNLHQVSARSWDHNEFFAQFAGDHTLLTPGYSVILEKLAEGLDIRLRSPVQSID
YSGDEVQVTTTSGAVCTAQKVLVTVPLALLQKGAIQFNPPLSDKKMKAINSLGAGIIEKI
ALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKQHSVLMSVIAGEAVAAVR
SLEDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIL
AEEIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcacgggggagaacgaagaaaaaagcatcttttgatcattctccagatagc
cttcctttgaggagttccggtaggcaggcaaagaaaaaggccacggagacgacggatgag
gatgaagatggtgggtcggagaagaagtaccggaaatgtgaaaaagcaggctgtacagcc
acatgtcctgtgtgctttgcaagtacttctgaaagatgtgccaaaaatggctacacatcc
cgatggtatcacctctcctgtggggagcatttctgtaatgaatgcttcgaccattactac
agaagccataaggatggatatgacaaatatactacatggaaaaaaatatggacaagcaat
ggaaaaactgagcctagtcccaaagctttcatggcagaccagcagctcccctactgggtt
caatgtacaaaacctgagtgtaggaaatggaggcagcttaccaaggagatccagctgact
ccccagatagcaaagacctaccgatgtgggatgaaaccaaatactgctgttaagcctgag
acctcagaccattgttccctcccagaggatctaagagtgtcagaagtgcccaaccactgg
tggtactccatgctcatcttacctcctttgctgaaagacagcgtggccgcacccctgctc
tcggcctactacccagactgtgtgggcatgagtccgtcctgcaccagcacgcaccgcgtg
accagcgacgccagccccgggaagctggagcaccccaaggcggtcccctctgtgctggtt
ccaggcatgaaccggtacttccagcctttctaccaacccaacgagtgcggcaaagccttg
tgtgtgaggccagatgtgatggagctggatgagctgtacgagttcccggagtattcgagg
gaccccaccatgtacctggctctgaggaatctcgtcctcgccctgtggttcactaactgc
aaggaagctcttactcctcagaaatgtattcctcacatcatcgtccggggtctcgtgcgc
attcgatgcgttcaggaggtggagaggatactttattttatgacaaggaaaggtctcatc
aacacaggagttctcagcgttggccctgaccagcatcttctgcctaaagattaccacaat
aaatcagtcatcattattggggctggtccagccggattagcagctgctaggcaactgcat
aactttggaattaaggtgactgtcctggaggccaaagacagaatcggaggccgagtatgg
gatgataagtctttcacaggcgtcacggtgggacgaggagcccagattgtcaacggctgt
gttaacaacccagtagcactcatgtgtgaacaacttggcatcagcatgcataagtttgga
gaaagatgtgacttaattcaggaaggtggaagaataactgaccccactattgacaagcgc
atggattttcattttaatgctctcttggatgtggtctctgagtggaggaaggataagact
cagctccaagatgtccctttaggagaaaagatagaggagatctacaaagcttttatcaaa
gagtctggaatccagttcagtgagctggaggagcaggtgcttcagttccatctcagcaac
ctggaatatgcctgtggcagcaacctccatcaggtgtctgctcgctcctgggaccacaat
gaattcttcgcccagttcgccggtgaccacaccctcctcactcccggatactccgtcatc
ttagaaaaactggctgagggactggacatccggctcaggtctcccgtacagagtattgac
tattctggagatgaagtgcaagttaccactaccagtggagcagtgtgtacagcacagaag
gtgttagtcactgtaccactggctttactgcagaaaggtgccattcagtttaacccaccg
ttgtcagacaagaagatgaaggccatcaacagcttaggagcaggcatcattgaaaagatt
gctttgcaatttccttataggttttgggacagtaaagttcaaggggctgacttttttggt
cacgttcctcctagtgccagcaagcgagggctttttgccgtgttctatgacatggatccc
cagaagcagcacagcgtgctgatgtcggtgattgcgggagaggcggtggcggccgtcagg
agcctggaggacaagcaggtgctgcagcagtgcatggccaccctgcgcgagctcttcaag
gagcaggaggtcccagatcccaccaagtactttgtcacccgctggagcacggacccctgg
atccagatggcctacagcttcgtgaagacggggggcagcggggaggcctacgacatcctt
gctgaggaaatacaaggaaccgtcttttttgctggcgaggcaacaaacaggcatttccca
cagactgttacaggggcatatttgagtggtgttcgagaagcaagcaagattgcagcattt
taa
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