KEGG   Bos indicus (zebu cattle): 109577801
Entry
109577801         CDS       T04792                                 
Symbol
SEH1L
Name
(RefSeq) nucleoporin SEH1
  KO
K14299  nucleoporin SEH1
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu03013  Nucleocytoplasmic transport
biu04150  mTOR signaling pathway
biu05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:biu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109577801 (SEH1L)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    109577801 (SEH1L)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    109577801 (SEH1L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:biu03019]
    109577801 (SEH1L)
   04131 Membrane trafficking [BR:biu04131]
    109577801 (SEH1L)
Messenger RNA biogenesis [BR:biu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     109577801 (SEH1L)
Membrane trafficking [BR:biu04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    109577801 (SEH1L)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40
Other DBs
NCBI-GeneID: 109577801
NCBI-ProteinID: XP_019842207
UniProt: A0A6P5DZ86
LinkDB
Position
24:44788752..44808492
AA seq 421 aa
MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSISVWDKSESGEWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVK
FAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHAP
MIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLLTVTDPVHDIAFAPNLGRSFHILAI
ATKDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDG
CVRLWKANYMDNWKCTGILKGNGSPVNGSSQQGNSNPSVGSNIPSLQNSLNGSSAGRYFF
PPLDSPRAGSRWSSYAQLLPPPPPPLVEHSCDADTASLQYPHPRRRSLSRPLNPLPENEG
V
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgttcgtggcgcgcagtatcgcggcggaccacaaggatctcatccatgatgtgtctttc
gacttccatgggcggcggatggccacctgctccagcgaccagagtatcagtgtctgggat
aaaagtgaaagtggggaatggcattgcactgctagctggaagacacacagtggatctgtg
tggcgtgtgacatgggcccatcctgagtttggacaggttttggcttcctgttcttttgac
cgaacagctgctgtctgggaagaaatagtaggagaatcaaatgataaactgcgcggacag
agccactgggtcaagaggacaacgctggtggacagcagaacgtccgttaccgatgtgaaa
tttgctcctaagcatatgggtctcatgttagcaacatgttcagcagatgggatagttaga
atctacgaggctccagacgtcatgaatctcagccaatggtctctgcagcatgagatatca
tgcaaactcagctgtagttgtatttcttggaacccttcaagctctcgtgctcatgctccc
atgattgctgtaggaagtgatgacagtagtccaaatgcaatggccaaggttcagattttc
gaatataatgaaaacaccaggaaatatgcaaaagctgaaactctcctgactgtcacagac
cctgtccatgatatcgcttttgctccaaacttgggacgatctttccacattcttgccata
gcaaccaaagacgtgagaatttttacattaaagcctgtgaggaaagaacttacttcctct
ggtgggccaacaaaatttgaaatccatatcgtggctcagtttgataatcataattctcag
gtctggcgagtgagttggaatataacaggaacagtgctggcatcttcaggagacgatggc
tgtgtgaggttgtggaaagctaactatatggacaactggaagtgtactggcattctgaaa
ggtaatgggagccctgtcaatgggagttctcagcagggaaactcaaatccgtccgtaggt
tcaaatatcccaagtcttcagaattcactaaatggatcttctgctggcaggtatttcttt
ccccctctggattccccacgggctggatcgagatggtccagttatgcccagctccttcct
cctcctcctcctcctctggtagagcactcttgcgatgctgacactgccagtctccagtat
cctcaccctcgcagacgatctctctctcggcctcttaatcccttacctgagaatgaaggg
gtttaa

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