Bos indicus (zebu cattle): 109578051
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Entry
109578051 CDS
T04792
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04010
MAPK signaling pathway
biu04020
Calcium signaling pathway
biu04713
Circadian entrainment
biu04925
Aldosterone synthesis and secretion
biu04927
Cortisol synthesis and secretion
biu04929
GnRH secretion
biu04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109578051 (CACNA1H)
04020 Calcium signaling pathway
109578051 (CACNA1H)
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
109578051 (CACNA1H)
04925 Aldosterone synthesis and secretion
109578051 (CACNA1H)
04927 Cortisol synthesis and secretion
109578051 (CACNA1H)
09159 Environmental adaptation
04713 Circadian entrainment
109578051 (CACNA1H)
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
109578051 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
biu04040
]
109578051 (CACNA1H)
Ion channels [BR:
biu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
109578051 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
TMEM208_SND2
Motif
Other DBs
NCBI-GeneID:
109578051
NCBI-ProteinID:
XP_019842599
UniProt:
A0A6P5DX80
LinkDB
All DBs
Position
25:1411493..1439298
Genome browser
AA seq
2329 aa
AA seq
DB search
MALSAVQPIILSSPLGAGGGARGRGLALLAHHLAAFRRSRGGTWRCTVASVEPRRHLVAT
LRMCVLIEVAVGTCXTWFEHVSMLVIMLNCVTLGMFRPCEDVECRSERCGILEAFDDFIF
AFFAVEMVIKMIALGLFGQKCYLGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVL
RPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDS
TFARNSNLSFLRPYYQPEEGEENPFICSSRRDNGMQKCSHIPSRRELRVECTLGWEAYGQ
PQAEGAGGTGHHTCINWNQYYNVCRSGDSNPHNGAISFDNIGYAWIAIFQVITLEGWVDI
MYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRENQLMREQRARYLSN
DSTLASFSEPGSCYEELLRYVGHVCRKLKRRGLRLYARWQSRWRKKVEPGGATHGQGSGR
RPRRAGGRAASIHHLVYHHHHHHHHHYHFSHGSPRRPGPEPGAGDTRLVRAGAPASPGRG
PPDAESVHSVYHADCHVEGPQERARVAHAAATAAAGLKLAAGLGAMNYPTILPSAAGSGK
SGLGPKGKRPGGPPGAGGHSPLRLSSPDPCEKIQHLVGEHGLGQAPSRLSGLSVPCPLPS
PQAGTLTCELSSCPYCTSALEDPELEFSDSDSGXSDSNGVYEFTQDVRHGDHRDPMQSPP
EAEAPGXXXXXXXXXXXXXAGEQGGLGHVWASFSGKLRRIVDSKYFNRGIMVAILTNTLS
MGVEYHEQVGAPHRQPSEWPWGTSRLPVSPAGFSLSWAPQRALSGSHPNPAHPTPPPTPS
VWEIIGQADGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFI
FSILGMHLFGCKFSLKTDTGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTS
SWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDATRSDTDEDKTSTHLEEDLDKFRDL
RATEMKMYSLAVTPNGHLEGRGSLPPPLIMRTAATPMPTPKSSPHLDEAPGPLDSRRGSS
SSMDPQLGDQKSLSSLRSSPCAPWGPNSAWSXRRSSWNSLGRAPSLKRRSQCGERESLLS
GEGRGSGSTDEEAEDGRPGAGASPGTRATPLRRTESLDHRSTLDLRPPRPATLLPTKVHD
CNGQVLALPSEFFLRIDSHKEDPAEFDDDVEDSCCSRLQKVLEPHKPECCRSREPWALYL
FSPQNRFRISCQKIIAHKMFDHVVLVFIFLNCITIALERPDIDPGSTERVFLSVSNYIFT
AIFVAEMMVKVVALGLISGEHAYLQSSWNILDGVLVLVSLVDIIVAMASAGGAKILGILR
VLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKF
YYCEGADTRNISTKAECRAAHYRWVRRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDA
VGVDQQPVPNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEK
RQRRLERKRRSTFPNPEAQRRPYYADYSPTRRSIHTLCTSHYLDLFITFIIGVNVITMSM
EHYNQPKALDEALKYCNYVFTIVFVVEAVLKLVAFGFRRFFKDRWNQLDLAIVLLSIMGI
TLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLF
MLLFFIYAALGVELFGRLECSEDNPCEGLSRHATFSNFGMAFLTLFRVSTGDNWNGIMKD
TLRECAREDKHCLTYLPAISPIYFVTFVLVAQFVLVNVVVAVLMKHLEESNKEAREDAEL
DAELEMEMAQGSPARPRPAAPQSPGASPDSPNVLVVRKVSVSRMLSLPNDSYMFRPVAPA
AAAHPHPLQEVEMETYAGAAAGQVTAAHSPPVESCASLQVPSAVSSPSRGGDTLRALPXX
GAARSPNVGRLLCRQEAVHTESLEGHVDGTEDSSPFWGEPGGKTPVRQASLGPSLRSPSR
SPRPSSIRTRKHTSGQHCISSRPPAPGGEESEAPDPADEEVSHITSSARSPLASPTACGI
VGGEPDLHRLYSVDARGFLDQPGRVDEQRRPLGEPGVGDSRPEAGEAKPRVLEAELALGA
RRKKKMSPPCISIEPPAEDEGAARAPAAEGGSTTLRRRTPSCEAVPHRDPLEPADSTGLD
AAAKGERRGQGPCRTEHLTVPNFTFEPLDVGSPSGDLFTDAGHGATPEPRPSSSGTAAPP
EPREMESTVPSGDPLEEGRGVHLTVPESPPKRASPPAVPVPGDDVDEPV
NT seq
6990 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctcagcggtccagcccatcatcctgtccagccccctgggcgccgggggtggg
gctaggggccgcggcctggcactgctggcccaccacttggctgccttccggaggagcaga
gggggaacttggcggtgcactgtggcttctgtggagccgaggcgccacctggtggccact
ctcagaatgtgcgtcctcattgaggtggccgtcggcacctgcyccacgtggttcgagcat
gtcagcatgctggtcatcatgctcaactgcgtgaccctgggcatgttccggccctgcgag
gacgtcgagtgccgctcggagcgytgtggcatcctmgaggcctttgacgacttcatcttc
gccttcttcgcggtggagatggtcatcaagatgatcgccctggggctgtttgggcagaag
tgctacttgggtgacacgtggaacaggctggacttcttcatcgtcatggcgggtatgatg
gagtactccttggacggacacaacgtgagcctctcggccatccgaaccgtgcgcgtgctg
cggccccttcgtgccatcaaccgtgtgcccagcatgcggatcctggtcacrctgctgctg
gacacactgcccatgctcggcaacgttctcctgctctgcttctttgtcttcttcatcttc
ggcatcgtgggcgtccagctttgggccggcctgctgcgcaaccgctgcttcctggacagc
accttcgccaggaacagcaacctcagcttcctgcggccgtactaccagccggaggagggc
gaggaaaacccgttcatctgctcctcccgccgggacaacggcatgcagaagtgctcgcac
atccccagccgccgcgagctgcgcgtggagtgcacgctgggctgggaggcctacgggcag
ccgcaggccgagggcgcaggtggcacgggtcaccacacctgcatcaactggaaccagtac
tacaatgtgtgccgctcgggcgactccaacccgcacaacggggccatcagcttcgacaac
atcggctacgcctggatcgccatcttccaggtgatcacgctggagggctgggtggacatc
atgtactacgtcatggacgcccactccttctacaacttcatctacttcatcttgcttatc
atcgtgggctccttcttcatgatcaacctgtgcctggtggtcatcgccacgcagttctca
gagacgaagcagcgggagaaccagctgatgcgggagcagcgggcccgttatctgtccaat
gacagcacactagccagtttctctgagccgggcagctgctatgaggagctcctccggtac
gtgggccacgtgtgccgcaagctaaagcgccgtggcctgcgcctctacgcccgctggcag
agccgctggcgcaagaaggtggagcccggtggcgccacgcatggccagggctcagggcgg
cggccgcggcgggcaggcgggcgcgctgcctccatccaccacctcgtgtaccaccaccac
caccatcaccaccaccactaccacttcagccacggcagcccccgccggccaggccccgag
ccaggagccggcgacaccaggctggtgcgggccggagcgccagcctcacccgggcgcggg
ccccctgacgccgagtcggtgcacagtgtgtaccacgctgactgccacgtggaggggccg
caggagagggcgcgcgtggcacacgccgcagccactgccgctgctgggctcaagctggcc
gccgggctgggagccatgaactaccccaccatcctgccctcggctgcgggcagtggcaaa
agcggcctcgggcccaaggggaagcggcctggtggccccccgggagccggggggcacagc
cccctgaggctgagcagcccggacccctgcgagaagatccagcacctggttggggagcat
ggactgggccaggcccccagccgcctgtcaggcctgagtgtgccctgccccctgcccagc
ccccaggcgggcacgctgacytgtgagctgagcagctgcccgtactgcaccagtgccctg
gaggaccccgagctggagttcagcgactcagacagtggagrctcagacagcaatggggtc
tacgagttcacgcaggatgtgcggcacggggaccaccgcgaccccatgcagtcgcccccc
gaggcagaggcaccaggcgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngca
ggcgagcagggtgggctgggccacgtctgggcctccttcagtggcaagctgcgccgcatc
gtggacagcaagtacttcaaccggggcatcatggtggccatcctcactaacacgctgagc
atgggtgtcgagtaccacgagcaggtgggtgccccacacagacagccctcagagtggccc
tggggcacgtcccgcctgcctgtgtctcctgcaggctttagcctctcatgggctccacag
agggctctctcaggaagccatcctaaccccgcccaccccaccccacccccgacccccagc
gtgtgggagatcatcgggcaggcggacggcgggctgtcggtgctgcgcaccttccggctg
ctgcgggtgctcaagctggtgcgcttcatgcccgcactgcggcgccagctggtggtgctc
atgaagaccatggacaacgtggccaccttctgcatgctgctcatgcttttcatcttcatc
ttcagcatccttggcatgcatctctttggctgcaaattcagtctgaaaacagataccgga
gacacaatccccgaccggaagaactttgattccctactgtgggccatcgtcaccgtgttc
cagatcctcacccaggaggactggaacgtcgtcctgtacaacggcatggcctccacgtcc
tcctgggccgccctgtacttcgtggccctcatgacctttggcaactacgtgctcttcaac
ctgctggtggccatcctggtggagggtttccaggccgagggtgatgccaccaggtccgac
acagatgaagacaagacatccacccacttggaggaggacttggacaagttccgagacctc
agggccacagagatgaagatgtactcgctggcagtgacacccaacgggcacctggagggc
cggggcagcctgccccctccccttatcatgcgcacagcggccacgcccatgcccaccccc
aagagctccccacacctggacgaggcccctggccccctggactcgcgccgtggcagcagc
agctccatggaccctcagctaggagaccagaaatctctgtccagcctccgcagctcgccc
tgcgccccctgggggcccaacagcgcctggagcanccggcgctccagctggaacagcctg
ggccgtgcacccagcctcaagcgcaggagccagtgtggggagcgcgagtcgctgctgtcc
ggtgagggcaggggcagcggcagcactgacgaggaggccgaggatggccggcccggggcg
ggggcctcgccgggtacgcgtgccacgccgctgcggcgcaccgagtccctggaccaccgt
agcacgctggacctgcggcccccacggccagccaccctgctgcccaccaaggtccacgac
tgcaacgggcaggtgctggccctgccgagcgagttcttcctgcgcatcgacagccacaag
gaggatccggccgagtttgatgacgatgtggaggacagctgctgctcaaggctgcagaag
gtgctggagccgcataagccggagtgctgccggagccgcgagccctgggccctgtacctc
ttctccccacagaacaggttccgcatctcctgccaaaagatcattgctcacaagatgttc
gatcatgtcgtcctcgtcttcatcttcctcaactgcatcaccatcgccctggagaggccc
gacatcgaccccggcagcactgagcgcgtcttcctcagcgtctccaactacatcttcaca
gcaatcttcgtggcggagatgatggtgaaggtggtggccctgggcctcatctcgggtgag
catgcctacctgcagagcagctggaacatactggatggggtgctggtcctggtgtccctg
gtggacatcatcgtggccatggcctcggctggcggcgccaagatcctgggcatcctgcgt
gtgctgcgcctgctgcggaccctgcggccgctaagggtcatcagccgtgcgccgggactc
aagctggtggtggagactctgatatcgtccctcaggcccatcgggaacatcgtcctcatc
tgctgcgccttcttcatcatcttcggcatcctcggggtgcagctcttcaaggggaagttt
tactactgcgagggcgccgacaccaggaacatttccactaaggccgagtgcagggccgcg
cactaccgctgggtgcgacgcaagtacaacttcgacaacctgggccaggcgctgatgtcg
ctgttcgtgctctcgtccaaggacggctgggtgaatatcatgtacgacgggctggacgcc
gtgggcgtggaccagcagcccgtgcccaaccacaacccctggatgctgctctacttcatc
tccttcctgctcatcgtcagcttcttcgtgctcaacatgttcgtgggcgtcgtggtggag
aacttccacaagtgccggcagcaccaggaggccgaggaggcgcggcggcgcgaggaaaag
cggcagcgtcgcctggagaggaagcgcaggagcactttccctaacccagaggcccagcga
cggccctactatgcggactactcgcccacccgccgctccatccacactctgtgcaccagc
cactacctggacctcttcatcaccttcatcattggcgtcaacgtcatcaccatgtccatg
gagcactacaaccagcccaaggctctggacgaggccctcaagtactgcaattacgtgttc
accatcgtctttgtcgtcgaggccgtgctgaagctggtggcctttgggttccggaggttc
ttcaaggacaggtggaaccagctggacctggccatcgttctgctgtccatcatgggcatc
acgttggaggagatcgagatgaacgcagcgctgcccatcaaccccaccatcatccgaatc
atgcgtgtcctccgtatcgcccgcgtcctgaagctgctcaagatggccacgggcatgcgg
gccctgctggacacggtggtccaggcgctgccccaggtagggaacctcggcctgcttttc
atgctcctgttttttatctatgctgccctgggagtggagctgttcgggaggctagaatgc
agtgaggacaacccctgcgagggcctgagcagacacgccaccttctctaacttcggcatg
gccttcctcacgctgttccgcgtgtccaccggggacaactggaacgggatcatgaaggac
acgctgcgcgagtgcgcccgcgaggacaagcactgcctcacctacctgccggccatctcg
cccatctacttcgtcaccttcgtgctggtggcccagttcgtgcttgtcaacgtggtggtg
gccgtgctcatgaagcacctggaggagagcaacaaggaggcccgcgaggacgccgagctg
gacgcagagcttgagatggaaatggcgcaggggtcccccgcccgtcccaggccggcggcc
cctcagagccccggcgcctcgccggactcccccaacgtgctggtcgtgcgcaaggtgtcg
gtgtccaggatgctatccctgcccaacgacagctacatgttccggcccgtggcgcctgcg
gcagccgctcacccccacccgctacaggaggtggagatggagacctacgcgggcgcggcc
gccggccaggtcaccgctgcccactcgccgcctgtggagtcctgcgcctccctccaggtt
ccgtccgccgtgtcctccccgtccaggggcggcgacaccctccgtgccctgccccnnngg
ggtgcagcccggtcgcctaatgtcggccgacttctctgcagacaggaggccgtccacacg
gagtccctggaagggcatgtcgatggcactgaggacagcagcccattctggggagagcct
ggcgggaagacccccgtgagacaggcatccctggggccctccttgcggtccccatcccgg
tccccgcgaccctccagcatccgcacccgcaagcacacttctggacagcactgcatctcc
agccggcctcctgccccaggcggggaggagtccgaagccccagacccagctgacgaggag
gtcagccacatcaccagctctgcccgcagccctttggcctcgcccactgcctgtgggatc
gtgggcggcgagccagacctgcacaggctctacagcgtggacgcccggggcttcctggac
cagccgggccgggtggatgagcagaggcggcccttgggggagccaggagttggggacagc
cgtccagaggccggggaggcgaagccccgggtcctggaggccgagctggccctaggggcg
cgcaggaagaagaagatgagccccccctgcatttccatagagccccccgctgaggacgag
ggtgcggccagggcccctgcggcagaaggcggcagcaccaccctgcggcggcgaacccca
tcctgcgaggctgtgccccatagggaccccctggagcccgcagacagcacagggctggac
gctgctgccaagggggagcggcggggccagggcccctgccgtacagaacacctgactgtc
ccgaacttcacctttgagccactggacgtggggagccccagtggggacctgttcacagat
gcgggccatggggccaccccagaacccagaccctcctcctcaggcaccgcggcccctcca
gaaccccgggagatggagtccacagtgccctcaggagaccccctagaggaggggcggggg
gtgcacctcactgtcccggagagcccaccgaagagagcgtcccccccggctgtgccagtc
ccgggtgacgacgtggatgagcccgtgtag
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integrated database retrieval system
