Bos indicus (zebu cattle): 109578063
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Entry
109578063 CDS
T04792
Name
(RefSeq) ATP-binding cassette sub-family A member 17-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109578063
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
biu02000
]
109578063
Transporters [BR:
biu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
109578063
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_15
RsgA_GTPase
AAA_22
nSTAND3
AAA_30
SRP54
AAA_13
Arf
Motif
Other DBs
NCBI-GeneID:
109578063
NCBI-ProteinID:
XP_019842610
UniProt:
A0A6P5DZX7
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All DBs
Position
25:2394504..2456749
Genome browser
AA seq
1274 aa
AA seq
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MRSKVFYKGRDEHVAVKDLTVNLYQGQITVLLGHNGAGKTTTCNILTVQFDTKDGASARF
TRYRHSAPQTAAVSENGREPGLPTEHCPQPAYKLKGLPRQKCPEEVKRMLHVLGLEEKRD
SRSRFLSGGMRRKLSIGIALIAGSKVLMLDEPTSGVDAISRRAIWDLLQQHKSDRTILLT
THFMDEADLLGDRIAIMAKGELQCCGSSLFLKEKYGAGYYITLVRKPHCDTEKISLLVYQ
HIPNAVFQSSIGEELTFILPKESAHSFEALFTDLELRQEELGIASFGASVTTMEEIFIRV
NKLMDSDIDLQIIKLPSFHSHPLVSRVPVNRIRRLHSRIFSIPSGLPIHPNTGFSLLCQQ
FYAMFLKRATYSWRNWIMMLSIQILVPLVILSISLSFLNFDISMDNSPLELTLKSYGQTI
VPFYISPNSRLGPRFLDHLTDVLMAEDQKPLELQSPVEAFLLKKLEEEPEVFDQNYLVAI
SFDDMENHTVVTALFNNQAYHSTAQALALVDNVLFKLLSGPSASITVLNHPQPESSMETA
EDILYEGPKGHYLVINLLFGMAFLSSSFSILTVKERGLKAKQVQFISGVHVATFWLSSLL
WDLLSFLVPSLLLLVVFLYYDEEAFTHKENVRAVFLMLMLYAWAIIPFIYLTSFCFENAG
NACVKLIIMLTFLSIGPFVLVSVTSEKDLGYTEISESLDNTFLLLPGHCLGMALANLYYN
FELQKFCKVKSLDQIECSKVSEGYVVQEDIYAWESLGMGKYLIALAISGLVYLILLFLIE
TNVLWELKARFSGLYWKQKLVVLQNAESVPGDQDVEEEAKMIKNSWEDLCKKNPLVLKEL
SKVYSRKVPPLAVNKVSFTVQAEECFGLLGLNGAGKTTIFKILTGEESITSGDAFVNSIS
VSSDLRKVRQWIGYCPQVDALLDHMTGKETLVMFSRLRGIPERHISSCVDQILDDLLMYT
YADKLVKTYSGGNRRKLSAGIALLGEPVVIFLDEPSTGMDPVARRLLWGTVARARKSGKA
IVITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLRAKIRSDGQQEALEE
FKAFVGLTFPGSVLEDEHQGMVHYHLPGDXLSWAKVFGIMEQAKTMYMLEDYSVNQISLE
DIFLSFSCPVPPAQGTFLPASLLVSHSNSLQAFLLVFIPATLSASLSTCLPASLATSLKD
CLASKRAMPLTTXYQGRAPDYGSVGLCLEESSDKVTVQGEDKKYQTGNCSQWEHSGLPID
REEILRTDKVRVTR
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcaaggtgttctacaagggaagggatgagcatgtggcagtcaaagacctgacg
gtgaacctataccagggccagatcacggttctgctaggccacaacggagcgggcaagacc
accacctgcaacatcctcacagtgcagtttgacactaaggatggagccagtgcacgcttc
acacgctacaggcacagtgccccacagactgcggccgtgtcagaaaacggccgcgagcct
gggctcccaacagagcactgcccacaacccgcctacaaactgaaaggcttgccgcgtcag
aagtgccctgaggaggtcaaacgcatgctgcacgtgctcgggctggaggagaagcgggat
tcccggagcaggtttctgagcggcgggatgcggcgcaagctctccatcggcattgccctc
atcgcgggctccaaggtgctgatgctggacgagcccacctcgggcgtggacgccatctcc
aggagggccatctgggaccttctgcagcagcacaagagcgaccgcaccatcctgctgact
acccacttcatggacgaggctgacytgctgggggaccgcatcgccatcatggccaagggg
gagctgcagtgctgcgggtcgtcgctgttcctcaaggagaaatacggtgcaggatattat
ataactctggtaagaaaaccacattgtgacacagagaagatttctcttctggtttaccag
cacataccaaatgcagttttccagtctagcattggagaagagctaacatttatccttcct
aaagagagygcacacagctttgaagctctgtttacggacttggaactgaggcaggaagag
ctgggcattgccagctttggggcctctgtcaccactatggaagaaatcttcattcgggtt
aataagctgatggattccgatatagacctgcagatcatcaagcttccctccttccattct
catccactggtgagcagagttcctgtcaacaggattagacgtcttcattcaaggattttc
tcaataccatctggcctacccatccatcctaacaccgggttcagccttctctgccaacag
ttctatgctatgttcttgaaaagggctacctattcttggcgcaactggatcatgatgctg
tcaatacagatcctggtgcctctggtcattcttagcatcagcctctcattcctcaacttc
gatataagcatggacaacagcccattggagctgaccctaaaatcatatggtcaaactatt
gttccattctacatttctccgaactccaggctgggtccgcggtttctagaccatctgaca
gatgtgcttatggctgaggaccagaaacctctggagctgcaaagcccagtggaagcattc
ctcctgaaaaagttagaggaggagcccgaggtctttgaccagaactacctggtggccatt
tcttttgacgacatggagaaccacaccgtcgtgacagcgctgttcaacaaccaggcgtac
cattccacggcccaggcgctggcgttggtggataacgtcctgttcaagttgctttctggg
cccagcgcgtccataacggttctgaaccaccctcagcctgagtcgagcatggagaccgca
gaggacatcctgtatgagggccctaaaggacattatcttgtcatcaacttgctttttgga
atggctttcctttcgagttccttttccatcttgacagtcaaggagagaggcctcaaggcc
aagcaggtccagttcatcagcggcgtccacgtggctacgttctggctctcgtctctgcta
tgggacctcctgtccttccttgtccccagcctgctgctgctggtggtatttctatactac
gatgaggaggcttttacacacaaggagaatgtccgagctgtcttcttgatgctgatgctc
tatgcctgggccatcatccccttcatctacctgaccagcttctgctttgagaatgcgggg
aacgcctgtgtcaaactcatcatcatgctgacctttctgagcattggcccctttgttctt
gtctcggtcacaagtgaaaaagaccttggctacacagagatctcagagtccctggataac
acgttcctactgcttccaggccattgcctagggatggctttagccaacctgtactacaac
tttgaactgcagaagttttgcaaggtcaagagcttggaccagattgagtgcagtaaagtt
tcagagggctatgtggtccaggaggacatctatgcctgggagtctctcgggatggggaag
tacctgatagcccttgccatctcagggctcgtgtacctcatcctgcttttcctcattgaa
accaatgtcttatgggaactgaaagccaggttttctggcctctactggaagcaaaaattg
gttgttttgcagaatgcagagtctgtgcctggagaccaagatgtggaagaggaagcaaaa
atgatcaagaactcttgggaagatctgtgtaagaaaaacccactggtccttaaagaactg
tctaaggtctattccaggaaggtgcctccactggctgtgaacaaggtttccttcactgtt
caagcagaggagtgctttggtcttcttggcctcaatggagctgggaaaactaccattttc
aagatattgactggggaagagtctatcacctctggggacgcctttgtcaacagcatcagy
gtcagctctgacttgaggaaggtgcgacagtggatcggctactgtccccaggtcgatgcc
ctgctggaccacatgacgggcaaggagacgctggtcatgttctcccggctccggggcaty
cctgagcgtcacatcagctcctgtgtggaccaaattcttgatgacttgctcatgtacacg
tacgcygacaaattggtgaagacctacagtggcggcaacaggcggaagctgagtgctggc
attgccctgctgggagagcctgtggtcatcttcctggacgagccatccactggcatggat
cctgtggcccggcgtctgctctggggcactgtggcacgggcccgaaagtccggcaaggcc
atcgtcatcacctcccacagcatggaggagtgtgaagccttgtgcacccggctggccatc
atggtgcagggtcagttcaagtgcctgggcagcccacagcacctcaagagcaagtttggc
agcggctactccctgcgggccaagatccggagtgacgggcagcaggaggccctggaggag
ttcaaggcttttgtgggcctgaccttcccaggcagygtcctggaggatgagcaccaaggg
atggtccattaccacctgcccggcgatgamctcagctgggcgaaggtgtttggcattatg
gagcaagccaagacgatgtacatgttggaggactactcagtcaaccaaatctccctggag
gacatcttcctgagcttcagytgccctgtgccccctgcgcaagggacgtttctcccagcc
tctctcctggtctcccattccaattcccttcaggccttcctcctggtcttcatcccagcc
accctctctgcctcgctctccacctgcctcccagcctccctcgccacatccctcaaagac
tgccttgcttctaagagggccatgcccctgaccacagkgtaccagggccgtgcccctgac
tacggtagtgtgggcctctgcctggaggagtccagcgacaaagtaacagtacagggggag
gacaaaaagtaccaaacaggaaactgtagccagtgggaacacagtgggctcccaattgac
cgcgaggagatactgaggactgacaaggtccgggtgacacgctga
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