Bos indicus (zebu cattle): 109578162
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Entry
109578162 CDS
T04792
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109578162 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
biu04131
]
109578162 (RABGEF1)
Membrane trafficking [BR:
biu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
109578162 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
109578162 (RABGEF1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
BTB_2
SSTK-IP
Motif
Other DBs
NCBI-GeneID:
109578162
NCBI-ProteinID:
XP_019842721
UniProt:
A0A6P5DWK0
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Position
25:29956599..30028699
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AA seq
767 aa
AA seq
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MVVVTGREPDSRRPDGAMSSSDAEDDFLEPATPTATQAGHSLPLLPQEVPGPXEGLGARE
GPQNEEPVSGRADLGMRYFIDRDGAHFGDVLNFLRSGDLPPRERVRAVYKEAQYYAIGPL
LEQLENMQPLKGEKVRQAFLGLMPYYKDHLERIVEIARLRAVQRKARFAKLKVCVFKEEM
PITPYECPLLNSLRFERSESDGQLFEHHCEVDVSFGPWEAVADVYDLLHCLVXDLSAQGL
TVDHQCIGVCDKHLINHYYCKRPIYEFKITWCRRKMSLKSERRGIHVDQSELLCKKGCGY
YGNPAWQGFCSKCWREEYHKARQKQIQEDWELAERLQREEEEAFASSQSSQGAQSLTFSK
FEEKKTNEKTRKVTTVKKFFSASSRVGAKKAEIQEAKAPSPSINRQTSIETDRVSKEFIE
FLKTFHKTGQEIYKQTKLFLEAMHYKRDLSIEEQSECTQDFYQNVAERMQTRGKVPPERV
EKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQKRIRALHWVTPQMLCVPVNEEIPEV
SDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAIKITKNEPASADDFLPTLIYIVL
KGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLSQEDFDRY
MSGQTSPRKQESENWSPDACLGVKQMYKNLDLLSQLNERQERIMNEAKKLEKDLIDWTDG
IAKEVQDIVEKYPLEIRPPNQSVAAIDSENVENDKLPPPLQPQVYAG
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggtggtagtcacggggcgggagccagacagccgtcgcccggacggtgccatgtccagc
tccgacgccgaagacgactttctggagccggccaccccgacggccacgcaggcggggcac
tcactgcctctgctgccgcaggaggtacctggacccrgggaggggttgggggcgcgggaa
gggccgcagaacgaggagccagtgtccggcagagctgaccttgggatgcgctacttcatc
gaccgcgacggcgcgcacttcggcgatgtgctgaacttcctgcgctcgggggacctgcca
ccccgggagcgcgtgcgggccgtgtacaaggaggcccagtactacgccatcgggcccctc
ctggagcagctggagaacatgcagccactgaagggggaaaaggtgcgccaggcattcctg
gggctcatgccctactacaaagaccacttggagcggatcgtggagattgcccggttgcgc
gctgtccagcggaaggcccgctttgccaagctcaaggtctgtgtcttcaaggaggagatg
cccatcaccccctacgagtgcccgctgctcaactcgctgcgcttcgagcggagcgagagt
gacgggcagctctttgagcaccactgcgaagtggacgtgtctttcgggccctgggaggcc
gtggctgaygtttacgacctgctgcactgcctggtcayggacctgtcggcccagggcctc
accgtggaccaccagtgtatcggggtgtgcgacaagcacctcatcaaccactactactgc
aagcgccccatctatgagttcaagatcacatggtgcaggaggaagatgagccttaagtct
gaacgccgaggaattcatgtggatcagtcggagctcctatgcaagaaaggatgtggttac
tacggcaaccctgcttggcagggtttctgctccaagtgctggagagaggagtaccacaaa
gccaggcagaagcagattcaggaggactgggaactggcagagcgactgcagcgggaggaa
gaagaggcctttgccagcagtcagagcagccaaggkgcccaatccctcacattttccaag
tttgaagagaagaaaaccaatgagaagacccgcaaggttaccacagtgaagaaattcttc
agtgcttcatccagggttggagcaaagaaggcagaaattcaggaagcaaaagctcccagt
ccttccataaaccggcaaaccagcattgaaacggatagagtgtctaaagagttcatagaa
tttctcaagaccttccacaagacaggccaagaaatctataagcagaccaagctgtttttg
gaagcaatgcattacaaaagggayttaagtattgaggagcagtcagagtgtactcaggat
ttttaccagaatgtggctgaaagaatgcagactcgtggaaaagtgcctccagaaagagtt
gagaagataatggatcagattgaaaagtacatcatgactcgtctctataaatatgtgttc
tgtccagaaactactgatgatgagaagaaagatcttgctattcagaagaggatcagagcc
ctgcactgggttacacctcagatgctttgtgtccctgttaatgaagaaattccagaagtg
tccgatatggtggtgaaagcaattacagatatcattgagatggattcgaaacgtgtgccc
cgggataagttggcctgcatcaccaagtgcagcaagcacatcttcaatgccatcaagatc
accaagaatgagccggcttcagccgacgacttcttacccacactcatctacattgtcttg
aagggcaaccccccacgccttcagtccaacatccagtacatcacccgcttctgcaaccca
agccgactgatgacgggcgaggatggctactatttcaccaatctgtgctgtgccgtggct
ttcattgagaaattagatgctcagtctttgaatttaagtcaggaagattttgatcgatac
atgtctggccagacttctcccaggaagcaggaatctgagaattggtctcctgatgcgtgc
ttaggtgtgaagcagatgtataagaatttggacctcctgtctcagttgaatgaacgacag
gaaaggattatgaatgaagccaagaaacttgagaaagacctcatagattggacggatgga
atcgcaaaagaggttcaagacattgttgagaaatacccacttgaaattagacccccaaat
cagtctgtagcagctattgactctgaaaatgttgaaaatgataaacttcctccaccgttg
caacctcaagtttatgcaggatga
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