KEGG   Bos indicus (zebu cattle): 109578162
Entry
109578162         CDS       T04792                                 
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor
  KO
K20131  Rab5 GDP/GTP exchange factor
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu04137  Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:biu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    109578162 (RABGEF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:biu04131]
    109578162 (RABGEF1)
Membrane trafficking [BR:biu04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    109578162 (RABGEF1)
 Protein recycling
   Other Rab GTPase associated proteins
    109578162 (RABGEF1)
SSDB
Motif
Pfam: VPS9 DUF5601 zf-A20 BTB_2 SSTK-IP
Other DBs
NCBI-GeneID: 109578162
NCBI-ProteinID: XP_019842721
UniProt: A0A6P5DWK0
LinkDB
Position
25:29956599..30028699
AA seq 767 aa
MVVVTGREPDSRRPDGAMSSSDAEDDFLEPATPTATQAGHSLPLLPQEVPGPXEGLGARE
GPQNEEPVSGRADLGMRYFIDRDGAHFGDVLNFLRSGDLPPRERVRAVYKEAQYYAIGPL
LEQLENMQPLKGEKVRQAFLGLMPYYKDHLERIVEIARLRAVQRKARFAKLKVCVFKEEM
PITPYECPLLNSLRFERSESDGQLFEHHCEVDVSFGPWEAVADVYDLLHCLVXDLSAQGL
TVDHQCIGVCDKHLINHYYCKRPIYEFKITWCRRKMSLKSERRGIHVDQSELLCKKGCGY
YGNPAWQGFCSKCWREEYHKARQKQIQEDWELAERLQREEEEAFASSQSSQGAQSLTFSK
FEEKKTNEKTRKVTTVKKFFSASSRVGAKKAEIQEAKAPSPSINRQTSIETDRVSKEFIE
FLKTFHKTGQEIYKQTKLFLEAMHYKRDLSIEEQSECTQDFYQNVAERMQTRGKVPPERV
EKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQKRIRALHWVTPQMLCVPVNEEIPEV
SDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAIKITKNEPASADDFLPTLIYIVL
KGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLSQEDFDRY
MSGQTSPRKQESENWSPDACLGVKQMYKNLDLLSQLNERQERIMNEAKKLEKDLIDWTDG
IAKEVQDIVEKYPLEIRPPNQSVAAIDSENVENDKLPPPLQPQVYAG
NT seq 2304 nt   +upstreamnt  +downstreamnt
atggtggtagtcacggggcgggagccagacagccgtcgcccggacggtgccatgtccagc
tccgacgccgaagacgactttctggagccggccaccccgacggccacgcaggcggggcac
tcactgcctctgctgccgcaggaggtacctggacccrgggaggggttgggggcgcgggaa
gggccgcagaacgaggagccagtgtccggcagagctgaccttgggatgcgctacttcatc
gaccgcgacggcgcgcacttcggcgatgtgctgaacttcctgcgctcgggggacctgcca
ccccgggagcgcgtgcgggccgtgtacaaggaggcccagtactacgccatcgggcccctc
ctggagcagctggagaacatgcagccactgaagggggaaaaggtgcgccaggcattcctg
gggctcatgccctactacaaagaccacttggagcggatcgtggagattgcccggttgcgc
gctgtccagcggaaggcccgctttgccaagctcaaggtctgtgtcttcaaggaggagatg
cccatcaccccctacgagtgcccgctgctcaactcgctgcgcttcgagcggagcgagagt
gacgggcagctctttgagcaccactgcgaagtggacgtgtctttcgggccctgggaggcc
gtggctgaygtttacgacctgctgcactgcctggtcayggacctgtcggcccagggcctc
accgtggaccaccagtgtatcggggtgtgcgacaagcacctcatcaaccactactactgc
aagcgccccatctatgagttcaagatcacatggtgcaggaggaagatgagccttaagtct
gaacgccgaggaattcatgtggatcagtcggagctcctatgcaagaaaggatgtggttac
tacggcaaccctgcttggcagggtttctgctccaagtgctggagagaggagtaccacaaa
gccaggcagaagcagattcaggaggactgggaactggcagagcgactgcagcgggaggaa
gaagaggcctttgccagcagtcagagcagccaaggkgcccaatccctcacattttccaag
tttgaagagaagaaaaccaatgagaagacccgcaaggttaccacagtgaagaaattcttc
agtgcttcatccagggttggagcaaagaaggcagaaattcaggaagcaaaagctcccagt
ccttccataaaccggcaaaccagcattgaaacggatagagtgtctaaagagttcatagaa
tttctcaagaccttccacaagacaggccaagaaatctataagcagaccaagctgtttttg
gaagcaatgcattacaaaagggayttaagtattgaggagcagtcagagtgtactcaggat
ttttaccagaatgtggctgaaagaatgcagactcgtggaaaagtgcctccagaaagagtt
gagaagataatggatcagattgaaaagtacatcatgactcgtctctataaatatgtgttc
tgtccagaaactactgatgatgagaagaaagatcttgctattcagaagaggatcagagcc
ctgcactgggttacacctcagatgctttgtgtccctgttaatgaagaaattccagaagtg
tccgatatggtggtgaaagcaattacagatatcattgagatggattcgaaacgtgtgccc
cgggataagttggcctgcatcaccaagtgcagcaagcacatcttcaatgccatcaagatc
accaagaatgagccggcttcagccgacgacttcttacccacactcatctacattgtcttg
aagggcaaccccccacgccttcagtccaacatccagtacatcacccgcttctgcaaccca
agccgactgatgacgggcgaggatggctactatttcaccaatctgtgctgtgccgtggct
ttcattgagaaattagatgctcagtctttgaatttaagtcaggaagattttgatcgatac
atgtctggccagacttctcccaggaagcaggaatctgagaattggtctcctgatgcgtgc
ttaggtgtgaagcagatgtataagaatttggacctcctgtctcagttgaatgaacgacag
gaaaggattatgaatgaagccaagaaacttgagaaagacctcatagattggacggatgga
atcgcaaaagaggttcaagacattgttgagaaatacccacttgaaattagacccccaaat
cagtctgtagcagctattgactctgaaaatgttgaaaatgataaacttcctccaccgttg
caacctcaagtttatgcaggatga

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