Bos indicus (zebu cattle): 109578393
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Entry
109578393 CDS
T04792
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
biu01002
]
109578393 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
biu04121
]
109578393 (USP42)
Enzymes [BR:
biu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109578393 (USP42)
Peptidases and inhibitors [BR:
biu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109578393 (USP42)
Ubiquitin system [BR:
biu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109578393 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
109578393
NCBI-ProteinID:
XP_019843082
UniProt:
A0A6P5E1P0
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All DBs
Position
25:39870459..39909417
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AA seq
1325 aa
AA seq
DB search
MTIVDKASESSDPSTYQNQPGSSEAVSPGDMDAGSASWGAVSSLNDVSNHTLSLGPVPGA
VVYSSSSVPEKSKPSPQKDQALGDGIAPPQKVLFPSEKICLKWQQTHRVGAGLQNLGNTC
FANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPGDVIKPMFVI
NEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRS
RVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPA
SKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVL
VHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSHDVKNGGE
LTHSAHSPGQSSPRPVISQRVVNSKQAASGFIGPQLPSHMMKNPPHLNGTGPLKETPSSP
MSGPSGNSSVSRTGPVSASPSVQNWSVNRPSVIPEHPKKQKITISIHNKLPVRQGQSQSN
LHSNSLEHPNKPAPSSTITTSSAIQSTSSAPTPPASSKVPKQMAPREACSRPMMNGRPRL
SAGVLVPYGAESSEESDEEAKGLGQENGRGLTESACSPALDAEDGDASPHELQEPVALNG
ATGLDSDPTENGLPSDGAPCPGQPALHSEHPFPKANGLPGKLMPAPLPPLPEDKILETFK
LGSKAKGSAEETRTPGSEERPLEHPEAELEAGRSPPGDARDNLESVSNLSSKFKKASPPS
DPSIKPTKEEVSERVSAEPEEAVPSASTFCNPDKDALGDDQLLAPCDPGNLTDDQSKPSP
DVGGTLPERPQDPVAAEAAGRLSPGPSVPSEGDHEPEPLGHSGRDRGSDAEGPSKSMGVS
TDEAPSAQLDTITENRPEGPPERSSSERGEDSKAGQKAPEPCLVQEKVSSLRKVDRGHYR
SRRDRSSSGEHARESRSRTEVQHRRKRPHREHERPRPERPRPEPCALXXXXXXXXXXXXX
XXXXXXXXGAPDQEWGRYHHAEGDHAWTREKYYPDRLRWERCRYHHDRSPLYPSREPRDW
RPFHAEREYERAGPYGGRPYKDHYRGRKGYELVAKERDRHRFSSPRAGMAHAPPPHPAAK
YTHDRLSFGAEDGSCDLAARFHEHDNIKSRKRRYDSLENESHVEKKAWRSLQKDPVEEPK
VKKHKKSKKKKKSKDKHRDRDSRHQQDSDLSVAHSDADLHRHKKKKKKKKRHSRKSEDFG
RDSEPRLPKAASXETVDHFRKAEGAFPLADGLPLEGAAPFCEKTKHFRMESREVRCRLSQ
CDQGD
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaagcttctgaatcttcagacccatcaacctatcagaaccagcct
ggcagttctgaggctgtctcacctggagacatggatgcaggttctgccagctggggtgct
gtgtcttcgttaaatgatgtttcaaatcacacactttctttaggaccagtacctggtgct
gtagtttattcaagttcatctgtacctgaaaaatcaaaaccatcaccacaaaaggatcaa
gccctaggtgatggcattgctcctccacaaaaagttctcttcccatctgagaagatctgt
cttaagtggcagcagactcacagagtaggagctgggctccagaacttgggcaatacctgt
tttgcaaacgcagcactgcagtgtctaacttacacgccgcctctcgccaactacatgcta
tcacacgagcactccaagacatgtcatgcagaaggattttgcatgatgtgtacaatgcaa
gcacatatcacccaggcactcagtaatcctggggatgttattaaaccgatgtttgtcatt
aatgagatgcggcgcatagccaggcacttccgctttggaaaccaagaagacgcccacgaa
ttccttcagtacactgttgatgctatgcaaaaagcatgtttgaacggcagcaataaattg
gacagacacacccaggccaccacactcgtctgccagatatttggaggctacctaagatct
agagtcaaatgtttaaattgcaaaggtgtttcagatacttttgatccctatctcgatata
actttggagataaaggctgctcagagtgtcaacaaggccttggagcagtttgtaaagccg
gaacagctcgacggagaaaactcgtacaagtgcagcaagtgtaaaaagatggttccagct
tcaaagagattcactatacatagatcttctaatgttcttactctttctctgaaacgtttt
gcaaattttactggtggaaaaattgctaaggatgtgaaataccctgagtatcttgatatt
cgaccgtacatgtctcaaccaaacggagagccgatcatttatgttttgtatgcagtcctg
gtacacactggttttaattgccatgctggccattacttctgctacataaaagctagcaac
ggcctctggtaccaaatgaacgactccatcgtgtctaccagtgatatcagatcggtactc
agccagcaagcttacgtcctcttttatatcaggtcccacgatgtgaaaaatggaggcgaa
cttactcattccgcccacagccccggccagtcctcgccccgcccggtcatcagtcagcgg
gttgtcaacagcaaacaggcagcctcgggattcattggcccacagctcccctcgcacatg
atgaagaacccccctcacctgaacgggacgggaccactgaaggagacgccgagcagcccc
atgtcaggccccagcgggaactccagcgtcagcaggactggtcctgtgagcgcctccccg
tctgttcagaactggtcagttaacaggccctcagttattccagaacaccccaagaaacag
aaaatcacgatcagtattcacaacaagttacctgtgcgccaaggtcagtctcagtctaac
cttcacagcaattctttggagcaccccaacaagcccgccccctcttctaccattaccact
tcttctgcaatacagtctacctcgagtgcccccacgccgcccgcctctagtaaggtccca
aagcagatggccccgagggaggcctgctccaggcccatgatgaacggcaggcccaggctg
agcgctggcgtgctggtcccctacggcgccgagtcctccgaggagtctgacgaggaggcc
aagggcctcggccaggagaacggccgcgggctgaccgagagcgcgtgctcccctgctctg
gacgctgaagacggcgacgcctccccgcacgagctccaagaacctgtggctctaaatggt
gctactggtctggacagcgacccgacggaaaacggcctgccctcggacggggccccttgc
ccaggccagcccgcgctgcactcagaacacccctttcccaaggcaaacggcctccctggg
aagttgatgcctgctcctttgccacctcttccagaagacaaaatcttagagaccttcaaa
ctcggcagcaaagccaaaggctcggcagaggagactaggacacctggctcagaggagagg
cctctggagcatccggaggcggagctggaggctggccgctcccctcccggtgatgcccgg
gacaacctggagtctgtctcgaatctcagcagcaaattcaagaaggcttcgccgccctcg
gaccccagcatcaaacctaccaaagaagaagtctctgaacgtgtttcggcagaacctgag
gaggctgtaccgagtgccagcaccttttgtaaccccgacaaggacgccctcggggacgat
cagcttttggcaccctgtgaccctgggaatttaacagacgatcagagcaaaccgtccccg
gacgtgggagggacgttaccagagcggccccaggacccggtggccgcggaagccgcaggg
aggctgagcccaggtccctctgtgccttctgagggtgaccatgagcccgagcccttgggt
cacagcggtcgggacagaggctcggatgcggagggtccctctaagagcatgggagtgtcc
acagatgaggcgccttctgcgcagctagacacgatcacagaaaaccgtcctgaggggccc
cccgagcgcagcagcagtgagagaggggaagacagtaaggccgggcagaaggccccggag
ccgtgtctggtccaggagaaggtcagcagcctaagaaaggtcgaccgaggacattaccgc
agccgaagggaccgctcgtccagtggcgagcatgcacgggagagccggagcaggaccgag
gtgcagcatcggcggaagcggccccaccgrgagcacgagcggccgcggcctgagcggccc
cggccggagccctgcgccctgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnngggcgcccctgaccaggagtggggccgctaccaccac
gccgagggcgaccatgcctggacccgggagaagtactacccggacaggctgcgctgggag
cgctgccggtaccatcacgacaggtcccccctgtatcccagccgggagccccgggactgg
cggcccttccacgccgagcgagagtacgagcgggccgggccctatggcggccggccttac
aaggaccactacagaggccgcaagggctacgagctggtggccaaagagagggaccggcac
cgcttcagcagcccccgggcgggcatggcccacgcgccccctccacaccctgccgccaag
tacacccacgacaggctcagcttcggggctgaagacggcagctgcgacctggccgcacgg
tttcacgaacatgacaacattaagtcacggaaacggagatacgatagcctcgagaatgag
agtcacgtagaaaagaaagcctggagaagcttacagaaggaccctgtagaggagcccaaa
gtgaagaagcacaaaaagtcgaagaagaagaagaaatccaaagacaaacaccgggaccga
gactccaggcatcagcaggattcagacctttccgtagcgcactctgacgctgacctccac
agacacaagaagaagaagaagaaaaagaagagacactcgaggaaatcagaggactttggg
cgagattcagaaccgcgcttgcccaaggcagccagctrtgagactgtggaccatttccgg
aaagccgagggcgccttccccctcgcagacggcctgccgctggagggcgcggcacccttc
tgtgagaaaaccaaacacttcaggatggagagccgggaggtcaggtgtcgtctgtcccag
tgcgaccagggtgattga
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