Bos indicus (zebu cattle): 109578410
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Entry
109578410 CDS
T04792
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03430
Mismatch repair
biu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109578410 (PMS2)
03460 Fanconi anemia pathway
109578410 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
biu03400
]
109578410 (PMS2)
DNA repair and recombination proteins [BR:
biu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
109578410 (PMS2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
UfSP_MPN_N
Motif
Other DBs
NCBI-GeneID:
109578410
NCBI-ProteinID:
XP_019843121
UniProt:
A0A6P5DXP2
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All DBs
Position
25:complement(39785619..39809120)
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AA seq
922 aa
AA seq
DB search
MDSTFDTTNQREEAVGSVRGLIRKWAGHCVGSSQWAAGRPRELRREQLRVPPQALSASME
RADXPSSELAKAIKPIDRKSVHQICSGQVVLGLSTAVKELVENSVDAGATSIDLRLKDYG
VELIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTI
STCHTSVKVGTRLVFDHNGKILQKTPYPRPRGTTVSVQQLFYTLPVRHKEFQRNIKKEFA
KMVQVLQAYCIISAGVRISCTNQVGQGKRQPVVCTSGSSSLKENIGLVFGQKQLQSLIPF
VQLPPSDSICEEYGLSCSQALHNLFCISGFVSHCAHGVGRSSTDRQFFFINRRPCDPSKV
SRLVNEVYHMYNRHQYPFVVLNXSVDSACVDINVTPDKRQILLQEEKLLLAVLKTSLIGM
FESDVNKLQVSQQPLLDVEGHLIKRPSAEMEKPEPEKKDDPAPLRTRGEEKRVVTISRLR
ETFSLRHSTENKSRGPKATDPRRVSPKQKSSAQFPRALGPPCSQKHISEPGEEGRTSAQG
PHDLMSRVEMEEDSGHGSASAGSEEASSTPETSSHPSTDRVASSPXDKFSQENMESREKL
PETDHRLSGTKCHLNQEESSSTSGVLPQPTKLSSPNAKRFXKEGIPLNPNVLAESVKAQS
ASATVDVAVKINKKIVPLDFSMSSLAKRIKQLCQQEQQQESQQNYRKFRAKICPGEBQAA
EDELRKEISKTMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHTVLQG
QRLIAPQTLSLTAVNEAILIENLEIFRKNGFDFVIDEHAPVTERAKLISLPTSKNWTFGP
QDIDELLFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTPLNTSEMKKLITHMGEMDHP
WNCPHGRPTMRHIANLDVISQS
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggactcgacctttgacaccaccaatcagcgagaagaagctgtgggaagcgttcgcggc
cttatccggaagtgggcagggcactgtgtgggaagcagccaatgggcggccgggcgcccg
cgggagctgcggcgcgaacagctccgagtcccgcctcaggctctgtctgcatccatggag
cgagctgacsggccgagttcagaacttgctaaggccatcaaacctatcgatcggaagtca
gtccatcagatttgctctgggcaagtggtacttggtctaagcactgctgtgaaggagttg
gtagaaaatagtgtggatgccggcgcaactagtattgatctcaggcttaaagactatgga
gtggagctcatcgaagtttcagacaacggatgtggggtagaagaagaaaattttgaaggc
ttaactctgaaacatcacacttcgaagattcaggagtttgcagacctcactcaggttgaa
acttttggctttcgaggggaagctctgagctcactctgtgcactgagcgatgtgactatt
tctacctgccacacgtctgtgaaggttgggactcgattagtgtttgatcacaatggaaaa
attctccagaaaaccccctacccacgacccagggggacgacggtcagcgtgcagcagcta
ttttatacgcttcctgtgcgccataaggagtttcaaaggaatattaagaaggagttcgcc
aagatggttcaggtgttacaggcatactgcatcatttcagcgggcgtccgtataagttgc
accaatcaggtcgggcagggcaagcggcagcctgtggtgtgcaccagcggaagctccagc
ctgaaggaaaacatcggattggtgtttgggcagaagcagttgcaaagcctcatccccttt
gtgcagctgccccctagtgactccatctgcgaagaatatgggctgagctgttcccaggct
ctgcacaacctgttttgcatctcaggttttgtttcgcactgtgctcacggcgtgggaaga
agttcaacggacagacagtttttctttatcaatcggcggccttgtgacccatcaaaggtt
tccagacttgtgaatgaggtctatcacatgtataatcggcatcagtacccatttgttgtt
cttaatrtttctgttgattcygcatgtgtcgacatcaaygttactccagataaaaggcaa
attttactgcaagaggagaagcttttgttggcagttttaaagacgtctttgataggaatg
ttcgagagtgatgttaacaaactccaggtcagccagcagccactgctggatgtggaaggt
cacttaataaagaggccttcggcagagatggagaagccygagccagaaaagaaggatgat
cctgccccgttaaggactcgtggagaagagaaaagagtagtgaccatttccaggctgaga
gaaaccttttcccttcgtcactcgactgagaacaagtcccggggtccgaaggccactgat
ccgaggcgggtttctccgaagcagaaaagcagtgcccagtttcctagagctttggggccc
ccctgctcccagaagcacatttctgaacctggggaggaagggaggacttctgctcagggg
ccccacgacttgatgagcagagtggagatggaggaggactcggggcacggcagcgcatct
gccggctccgaggaggcatccagcacccccgagacaagcagtcaccccagcactgaccgg
gtggcaagctcccccraagacaaattttcccaagaaaatatggagtctcgggaaaagtta
cctgaaactgaccatcgtctttcaggcacaaagtgccatttaaaccaagaagaaagcagc
tccacatctggagtcttgccgcagcccacaaagctctcatccccaaatgcaaagcgtttt
amaaaagaagggattcctttaaatcccaatgtccttgcagagtcggtgaaagcccagagt
gcgtcagctacagtggaygtagctgtgaaaattaacaagaaaatagtgccccttgatttt
tccatgagttctttagccaaacgaataaagcagttgtgtcagcaagaacagcaacaagaa
agtcaacagaattataggaagtttcgggcaaagatttgccctggagaaratcaagcagca
gaagacgaactaagaaaagagatcagcaaaacgatgtttgcagaaatggaaatcattggt
cagtttaacttggggtttatcatcaccaagctgaatgcagatatcttcatagtggaccag
catgccacggacgagaaatacaacttcgagatgcttcagcagcacactgttctccagggt
caaaggcttatagcacctcagactctcagcctaacggctgtcaatgaagcrattctaata
gaaaatctggaaatattcaggaagaatggctttgactttgttattgatgaacacgcacca
gtcactgaaagagccaagttgatttccttgccaaccagtaagaactggacctttggaccc
caggacatagacgagctgctcttcatgctgagtgacagccctggggtcatgtgccggccc
tcccgcgtccggcagatgttcgcctccagagcctgtcgcaagtctgtgatgattggaacc
cctcttaacacaagcgagatgaagaaactcatcacacacatgggggagatggaccatccc
tggaactgtccccacggaaggcccaccatgagacacattgccaacctggatgtcatttct
cagagctga
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