KEGG   Bos indicus (zebu cattle): 109578451
Entry
109578451         CDS       T04792                                 
Symbol
IFT140
Name
(RefSeq) intraflagellar transport protein 140 homolog
  KO
K19672  intraflagellar transport protein 140
Organism
biu  Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:biu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:biu03037]
    109578451 (IFT140)
Cilium and associated proteins [BR:biu03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   109578451 (IFT140)
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_EML_2 Beta-prop_WDR19_1st WD40_Prp19 ANAPC4_WD40 Beta-prop_EML WD40_WDHD1_1st Beta-prop_RIG_2nd TPR_IFT80_172 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd WD40 TPR_COPA_B WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_WDR5 TPR_GEMI5 TPR_IFT122 TPR_WDR35 Beta-prop_VPS8 WD40_MABP1-WDR62_1st TPR_12 Beta-prop_NOL10_N VPS18_solenoid_2nd DUF6340 Cytidylate_kin2 Tricorn_2nd
Other DBs
NCBI-GeneID: 109578451
NCBI-ProteinID: XP_019843216
LinkDB
Position
25:complement(1638998..1696808)
AA seq 1441 aa
MALYFDHRIEAPDTVGSPSHIGWHPIYPFLAVASVSTTSGGSVDVYLEQGERVPDMHVER
SFRVTCLCWHPTRLILAIGWESGEVVMFNKQDKEQHAVPATHTADIAILAWSPNGNCLVS
GDRLGVLLLWRLDQRGRVQGMPLLRHEYGQPLTHCIFLLPPPGEDLVQLARAAVSGDEKA
LDMFNWKKSGFRSILKMGSQEGLSFFVSLTDGTVHHVDEKGRTAQVASTDSSIQTLFYLE
QRGALVAVTDSLLLCLFTVTPEGTAEEVMKVKLSGKTGHRADIALIDGSLLVTAIGEAAL
RFWDLERGENYVLSPEEKFGFEKGENINCVSYCKVKGLLAAGTDKGRVAMWRKAPGLPNG
RGAEGKDKWTLQAPTELEGNIMQIKWGSRKSLLAVNSISSVLILHEQAMSSHFHQQVAAV
QVSPSLLSVSFLSTGVTHSLRTDMHXSGVFATKDAVAVWNGKQVVIFEPSGATLRSAGSF
LCESPVLAMHEENVYTVEPNRVQVRTWQGTVKQLLPFSESEGNPCFLDICGTFLVVGTDL
AHFKSFDLSRREAKVHCGCKSLAELVPGVGGLTSLRCSASGSKISLLLSKADNSPDSKIC
FYDVDMDTVTILDLKTGQIDQRETLSINGQETKKSQALEDERLTDLVPVSHFWDQSEPRL
FVCEAVREADVVVLSFFVSEEHGFLLQDSFPRPPAFQTLLGIQVPHYYFTRKPGEANLED
QLDSGSQCIPQAVGRRPLRDFVGLEDCDKPTRDAMINFSFFLTIGDMDEAFRSIKLIKSQ
AVWENMARMCVKTQRLDVARVCLGHMGHARGARALREAQREPEPEARVAMLAVQLGMLED
AEQLYRRCGRYDLLNRLLQASGQWQRAIEVAERHDRMHLRTTYYNYARHLEASGDCSPAL
SYYEKSDTHRFEVPRMLVEDLQALGLYVNKMKDKTLWRWWAQYLESQAKMDAALHYYELA
QDYFSLVRIHCFQGNIQRAAEIASETGNWAASYHLARQYESQNEVRQAVHFYTRAQAFNN
AIRLCKEHGLDDQLMNLALLSSPEDMLEAARYYEERGEQMDRAVMLYHKAGHFSKALELA
FATQQFAALQLVAEDLDEKSDPVLLARCSDFFLEHGQCEKAVELLLAAKKYQEALQLCLE
QNLTITEEMAEKMTVPKDCKELSEEARRVLLEQIASCCMRQGSYHLATKKYTQAGDRLKA
MRALLKSGDTEKIVFFAGVSRQKEIYVMAANYLQSLDWRKDPEVMKSIISFYTKGRALDL
LAGFYDACAQVEVDEYQNYDKAHGALTEAYKCLSKAKARSPLDQEARLAQLQSRMTLVKR
FMQARRTYTEDPKGSVRQCQLLLEEPHLDSGVRVGDVYGFLVERHVHSGDLQTAYRYLEE
MRQRLPSANVSYYVSQHTVDAVHQGLGLPLTCAAPKRAQHSSMEEHKEADEEVAEEVESG
P
NT seq 4326 nt   +upstreamnt  +downstreamnt
atggccctctactttgaccaccgcatagaagccccagacacagtcgggtctccgtcccac
attggctggcatcccatctacccgttcttggcggttgcttctgttagcacaacctcagga
ggcagcgtggatgtgtatctggagcaaggcgagcgcgtgccagacatgcatgtcgagagg
tcgttccgggtcacctgcctgtgctggcacccaacgcggctgatcctggctattggctgg
gagtctggagaagtggtcatgtttaacaagcaggacaaggagcagcatgcagtccccgcc
acgcacacagccgacattgccatcctcgcctggagccccaacgggaactgcctagtgtcg
ggggacaggcttggcgtcctgctcctctggaggctggaccagcggggccgcgtgcagggg
atgccgctactgcggcacgagtacgggcagcccctcacccactgcatcttcctgctgccc
ccgcctggcgaggacctggttcagctggccagggcggcagtgagcggggacgagaaggcc
ctggacatgtttaactggaagaagagcggcttcaggagcatcctgaagatggggtctcag
gagggcctctcgttctttgtcagcctgacagacgggaccgtgcaccacgtggacgagaaa
ggcaggacggcccaggtggcatccacagacagctccatccagacactgttctacctggag
cagaggggggcgctggtggcggtgacggacagcctgctgctctgcctgttcacggtgacg
cccgagggcacggccgaggaggtgatgaaggtgaagctgagcgggaagacgggccaccgg
gcagacatcgcgctgatcgacggcagcctgctcgtgaccgccatcggagaggcggcgctc
agattctgggatttagaacgaggggagaactacgtcctgagtccagaggagaagtttggt
tttgaaaaaggagagaatataaattgcgtttcttactgtaaagttaaaggtctcctggca
gcaggtaccgacaaggggcgagtagccatgtggagaaaagcgccgggcctcccgaacggc
cgcggggcggagggcaaagacaagtggacccttcaggcccccactgagctggaaggaaac
atcatgcagataaagtggggctccaggaagagcctcctggccgtgaacagcatcagctcc
gtgctcatcctccatgaacaggccatgtcatcccacttccaccagcaggtggccgccgtg
caggtctccccaagcctcctcagcgtgtccttcctgtccacgggggtgacccacagcctg
cgcacagacatgcacrtcagcggagtgtttgccaccaaggatgctgttgccgtctggaat
ggaaaacaggtggtgatctttgagccgtctggagccacgttacgcagtgcagggtccttc
ctgtgtgagtctccagtgttagccatgcatgaagaaaacgtttatacggtggagccaaac
agagtccaagttcgaacctggcaggggaccgtgaagcagctcctgccgttctccgagtca
gaggggaacccatgcttcttggacatctgtggaactttcctggttgtagggacggacttg
gctcactttaaaagctttgatctttcccgaagagaggccaaggtgcactgcggctgcaag
agcctggccgagctggtcccaggcgtggggggcctgacctcactcagatgcagtgccagc
ggcagcaagatcagtctcctcctcagcaaggctgacaatagccccgattcaaaaatctgc
ttctacgacgtggatatggacacagtgaccatcctcgacctcaagacaggacagatagat
cagagagagacattgtccattaatgggcaggagacaaagaagagccaggccctggaggat
gagaggctgacagacctcgtgcccgtcagccacttctgggatcagagcgagccccggctg
ttcgtgtgcgaagccgtgcgcgaggcagacgtggtggtcctgtccttcttcgtctcagaa
gagcacggcttcctgttgcaggacagcttcccccgtccccctgccttccagacgctcctg
gggatccaggtgccccactactacttcacgagaaagccaggagaagctaatctggaggac
cagctggactccgggtcccagtgcatcccccaggcagtgggcaggaggcccctgcgggac
ttcgtagggctggaggactgcgacaagcccacgcgggacgccatgatcaacttcagcttt
ttcctgaccatcggggacatggatgaggccttcaggtccatcaagctcatcaaaagccag
gccgtctgggagaacatggcacgcatgtgcgtgaagactcagcggctggacgtggccagg
gtgtgcctggggcacatgggccacgcccggggggcccgagcgctgcgcgaggcccagcgg
gagccggagccggaggccagggtggccatgctggccgtgcagttgggcatgctggaggac
gcagagcagctctacaggaggtgtgggcgctacgacctcctcaaccgcctgctgcaggcc
tcaggccagtggcagagggccatcgaggtggccgagcgccacgaccgcatgcacctgcgc
accacctactacaactacgcccggcacctggaggccagcggggactgcagcccggccctc
agctactacgagaagtcggacacgcaccgcttcgaggtgccgcggatgctggtggaggac
ctgcaggctctggggctgtacgtcaacaagatgaaggacaagacgctgtggcggtggtgg
gcccagtacctggagagccaggccaagatggacgcggcgctgcactactacgagctggcc
caggactacttctccctggtccgcatccactgcttccagggcaacatccagcgggcygcc
gagatagccagcgagactgggaactgggcggcctcctaccacctggcccggcagtacgag
agccagaacgaggtgcggcaggccgtgcacttctacacgcgtgcccaggccttcaacaac
gccatccgcctgtgcaaggagcacggcctggacgaccagctcatgaacctggccctgctg
agctcccccgaggacatgctggaggccgcgcgctactacgaggagaggggcgagcagatg
gaccgggccgtcatgctgtaccacaaggccggccacttctccaaggccctggagctggcc
tttgccacccagcagtttgcagccctgcagctggtggcagaggacctggatgaaaagtcg
gatcccgtcctcctggcccgttgctctgacttcttcctggagcacggtcagtgcgagaag
gccgtggagctgctgctggccgccaagaagtatcaggaagcactgcagctgtgcctggag
cagaacctgaccatcaccgaggagatggctgagaagatgacggtgcccaaggactgcaag
gagctgtccgaggaggcccggcgggtgctgctggagcagatcgccagctgctgcatgcgc
cagggcagctaccacctggccaccaagaagtacacgcaggcaggggacaggctgaaggcc
atgagggcgctgctcaagtctggggacacggagaagatcgtgttcttcgcgggcgtctcg
cggcagaaggagatctatgtcatggcggctaactacctgcagtccctggactggcggaag
gaccccgaggtcatgaagagcatcatcagcttctacaccaagggccgtgcgctggacctt
ctggccggcttctacgatgcctgcgcccaggtggaggtcgacgagtaccagaactacgac
aaggcacatggggcgctgaccgaggcctacaagtgcctgtccaaggccaaggccaggagc
ccactggaccaggaggccaggctggcrcagctgcagagcaggatgacgctggtgaagcgc
ttcatgcaggcgcgcaggacctacacggaggaccccaaggggtcggtccggcagtgccag
ctgctcctggaagagccgcacctggacagcggcgtccgtgtcggggacgtctacggcttc
ctggtggagcgccacgtgcactcgggagacctgcagacggcctacaggtacctggaggag
atgcggcagcggctgccctccgccaacgtgtcctactacgtgagccagcacaccgtggac
gccgtgcaccagggcctggggctccctctgacctgcgcagcgccgaagcgcgcgcagcac
agcagcatggaggagcacaaggaggcggacgaggaggtggccgaggaggtggaaagtggg
ccctga

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