Bos indicus (zebu cattle): 109578557
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Entry
109578557 CDS
T04792
Symbol
RHBDF1
Name
(RefSeq) inactive rhomboid protein 1 isoform X1
KO
K27588
inactive rhomboid protein
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04668
TNF signaling pathway
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
109578557 (RHBDF1)
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Motif
Pfam:
iRhom1-2_N
Rhomboid
Motif
Other DBs
NCBI-GeneID:
109578557
NCBI-ProteinID:
XP_019843444
UniProt:
A0A6P5DZH8
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Position
25:complement(572133..590581)
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AA seq
890 aa
AA seq
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MGEARRDSSSSLQHKKPPWLKLDIPAVVPPAAEEPSFLQPLRRQAFLRSVSMPAEPARVP
SPHQEPRRPVLQRQMSITQTIRSRRVRSGHIHTLPPLGPPLPAGPSRSARLSRSLLRGTA
DWFGVSKDSDSTQKWQRKSIRHCSQRYGKLKPQVIRELDLPSQDNVSLTSTETPPPLYVG
PCQLGMQKIVDPLARGRAFRLADDAADGPSAPHTPVTPGAASLCSFSSSRSGFNRLPRRR
KRESVAKMSFRAAAALVKGRSVRDGTLRRAQRRSFTPASFLEEDTADFPDELDTSFFARE
GVLHEELSTYPDEVFESPSEAALKDWERAPEQVDLTGGALDRSELERSHLMLPLERGWRK
QKEGGAAAPQPKVRLRQEVVSTAGQRRGQRIAMPVRKLFAREKRPYGLGMVGRLTNRTYR
KRIDSYVKRQIEDMDDHRPFFTYWLTFVHSLVTILAVCIYGVAPVGFSQHETVDSVLRNR
GVYENVKYVQQENFWIGPSSEALIHLGAKFSPCMRQDPQVHSFIHAAREREKHSACCVRN
DRSGCVQTSEEECSSTLAVWVKWPLHPSAPDLAGQKRRYGSVCHQDPRVCDEPSSEDPHE
WPDDITKWPICTKSSAGNHTNHPHMDCVITGRPCCIGTKGRCEITSREYCDFMRGYFHEE
ATLCSQVHCMDDVCGLLPFLNPEVPDQFYRLWLSLFLHAGVLHCLVSVCFQMTVLRDLEK
LAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQILARPW
RAFFKLLAVVLFLFTFGLLPWIDNFAHISGFISGLFLSFAFLPYISFGKFDLYRKRCQII
VFQLVFLGLLAGLVVLFYFYPVRCEWCEFLTCIPFTDKFCEKYELDAQLH
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaggcccgcagggacagcagcagcagcctgcagcacaagaagccgccgtggctg
aagctggacatcccggccgtggtgcccccggcagcagaggagcccagcttcctgcagccc
ttgagacgccaggcattcctgcggagcgtgagcatgccggccgagcccgcccgcgtccct
tcgccccaccaggagccccggcggccggtgctacagcgccagatgtccatcacacagacc
atccgcagccgccgggtgcgctccgggcacatccacactctgcctcccttgggccccccg
ctgcccgcagggccctcccgcagcgcccgtctctctcggtccctgctcaggggcacggcc
gactggtttggagtgagcaaggacagtgacagcacccagaagtggcagcgcaagagcatc
cgccactgcagccagcgctacgggaagctgaagccccaggtcatccgcgagctagacctg
cctagccaggacaacgtgtcgctgaccagcactgagacgccacctcctctgtacgtgggg
ccgtgccagctgggcatgcagaagatcgtagaccccctggcccggggccgggccttccgc
ttggcggatgatgccgccgacggcccgagcgccccgcacacgcccgtcacgccgggtgcc
gcctccctctgctccttctccagctcccgctccggtttcaaccggctcccgcggcggcgc
aagcgcgagtcggtggccaagatgagcttccgggcagctgctgcgctggtgaagggtcgc
tcggttagggatggcactttacgccgcgcccagcgccgaagcttcactcctgccagcttc
ctggaagaggacacggctgacttccctgacgagctggacacgtccttctttgctcgggaa
ggtgtcctccacgaggagctgtccacttacccggacgaggtgttcgagtccccatcggag
gcagcgcttaaagactgggagcgagccccagagcaggtggacctcacgggcggcgccctg
gaccgcagcgagctggagcgcagccacctgatgctgcccctggaacgtggctggcgcaag
cagaaggagggcggcgcagcggccccgcagcccaaggtgcggctgcggcaggaggtggtg
agcacggcggggcagcggcggggccagcgcatcgcgatgccggtgcgcaagttgtttgcc
agggagaagcggccgtacgggctgggcatggtgggccggctaaccaaccgcacttaccgc
aagcgaatagacagctatgtcaaacgccagattgaggacatggacgaccacaggcccttc
ttcacctactggctgaccttcgtgcactcgctcgtcaccatcctagccgtgtgcatctat
ggcgtggcgcccgtgggcttctcacagcacgagaccgtagactcggtgctgcgcaaccgt
ggggtctacgagaatgtcaagtacgtgcaacaggagaacttctggatcgggcccagctcg
gaggccctcattcacctgggtgccaagttctcgccgtgcatgcgccaggacccgcaggtg
catagtttcatccatgctgcgcgcgagcgcgagaagcactcggcctgctgcgtacgtaac
gaccggtcaggctgcgtgcagacctcggaggaggagtgctcgtccacgctggcagtgtgg
gtgaagtggcccctgcatcccagtgccccagaccttgctggccaaaagaggcggtacggc
tctgtctgccaccaggatcccagggtgtgtgatgagccttcttctgaggacccccatgag
tggccagatgacatcaccaagtggccgatctgcaccaaaagcagtgctgggaaccacacc
aaccacccgcacatggactgcgtcatcacrggccggccctgctgcatcggcaccaagggc
aggtgtgagatcacctcccgggagtactgtgacttcatgaggggttacttccacgaggag
gccacactctgctcccaggtgcactgcatggacgacgtgtgtgggctcctgcccttcctc
aaccccgaggtgcctgaccagttctaccgcctgtggctgtccctcttcttgcacgctggg
gtcctgcactgcctggtgtccgtctgcttccagatgacagtcctgcgagacctggagaag
ctggcgggctggcaccgcatagccatcatctacctgctcagtggcgtcactggtaacctg
gctagtgccattttcctgccataccgggcagaggtgggcccagctggctcgcagtttggc
atcctggcctgcctcttcgtggagctcttccagagctggcagattctggcgcggccctgg
cgcgccttcttcaagctgctggccgtggtgctcttcctcttcaccttcggcctgctgcca
tggatcgacaacttcgcccacatctcaggcttcatcagcggcctcttcctctcctttgcc
ttcctgccctacattagcttcggcaagttcgacctgtaccgcaagcgctgccagatcatc
gtctttcagctggtcttcctgggcctgctggctggcctggtggtcctcttctacttctac
cctgtccgctgcgagtggtgtgagttcctcacctgcatccccttcactgacaagttctgt
gagaagtacgagctggatgctcagctccactga
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