Bos indicus (zebu cattle): 109578694
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Entry
109578694 CDS
T04792
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04612
Antigen processing and presentation
biu05145
Toxoplasmosis
biu05152
Tuberculosis
biu05164
Influenza A
biu05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
109578694 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
109578694 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
109578694 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
109578694 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
109578694 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
biu01001
]
109578694 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
biu04054
]
109578694 (CIITA)
Enzymes [BR:
biu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
109578694 (CIITA)
Protein kinases [BR:
biu01001
]
Serine/threonine kinases: Other
TAF1 family
109578694 (CIITA)
Pattern recognition receptors [BR:
biu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
109578694 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_14
LRR_9
AAA_22
Motif
Other DBs
NCBI-GeneID:
109578694
NCBI-ProteinID:
XP_019843692
UniProt:
A0A6P5E352
LinkDB
All DBs
Position
25:10600419..10646357
Genome browser
AA seq
1129 aa
AA seq
DB search
MRCLAPRPAGSYLPEPQGSGQCPTMELGPLEGSYLELLNSSADPLQLYHLYDRMDLTGEE
EIELCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQYVFQDTQLEGXSKDIFI
EHIGLEEMISESVELLEEAGQKSQKRPFPEELPVDLKHRKLAEPLTMPVVTGTFLVGPVS
DSLVQPCPPPPALFNTEPASSQTRLKDAAPLSSSLLSCLSLPAGPIQIIPTLPTLPQGLW
PISGTGTGVSSILIYQSEMPPASQTPPSSGPAVQSLPKSPDRPGSASPFAPSAADLPSMP
EPALTSRAGLTEDEMSPTKCPAAGGASSKLPKWPESVEQFYQSLRDKYQAQPTGPEGTLV
DMDLVRVRLEKSSGKSQERELATLDWAERQPARGGLAEVLLATSDRQQPRETRVIAVLGK
AGHGKSHWARAVSRAWAHGQLPQYDFVFCVPCHRLDRPGTSYRLQDLLSSLGPQPLPVDD
EVLSYIARRPNRILLILDGFEDLEAHDGSLHSTGGPGSAEPRSLRGLLAGLLQRKLLQGC
TLLLTAWPRGRLAQSLSKVDALFEVAGFSAQQAETYVRRYFESEGTPEHQERALALLQAR
PFLLSHSHSPTVCRTVCQLAEALLQRSDEAQLPSTLTGLYVGLLGPAAXXXXXXALAELA
RLAWELGRAHQRGLKAGCLPSAEARAWAVAQGWLRPTPGAPETELAFSSFLLQCFLGAVW
LALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQPRAGCLGALAGPAAATS
ADRKQKVLTRYLKRLQPGTLQAGRLLELLHCAHEALDPGLWQHVLQGLPARLSFLGTRLT
PPDTHVLGSALEAAGRDFSLDLRSTGVDASGLGSLVGLSCVTRFRAALSDTVELWESLQQ
RGEAKLLRAVEEKFTIEPFKAKSMKDVEDLGNLVQIQRTRSSSEAAAGELPAVRDLKKLE
FALGPVLGPQVFPKLVKILEAFTSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLN
LSQNNITDVGACKLAEALPALATSLLRLSLYNNCICDAGAESLAHALPDMVSLRVLDVQY
NKFTAAGAQQLAAGLRKCPQVKTLAMWTPTIPFGVQEHLQQLDPRIILR
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgcctggctccacgccctgccgggtcctacctgccagagccccaaggcagtgga
cagtgcccaaccatggagctggggcctctagaaggcagttacttagaacttctcaacagc
agtgctgaccctttgcagctctaccacctctacgaccggatggatctgacaggagaagaa
gaaatagagctctgctcagagcctgacacagacaccatcaactgcgaacagttcagcagg
ctgttgtgtgacatggaaggtgatgaagagaccagggaagcttatgccaatatcgcggaa
ttggaccagtacgtcttccaggacacccagctggagggcstgagcaaagacattttcatc
gagcacataggattggaagaaatgatcagcgagagcgtggaattgctggaggaggcaggg
cagaaaagtcagaagagacccttcccagaggagctgcctgtggatctgaagcaccggaag
ctagccgagcccctcaccatgcccgtggtgactggcactttcctggtggggccagtgagc
gactccttggttcagccctgcccgccacctcctgctctgttcaacacggagccagcatcc
agccagacccggctgaaggacgcagcgcctctgtccagttccttgttgagctgcctgagt
cttcccgcgggacccattcagattatccccactctccccactctgccccaggggctctgg
ccgatctcagggactgggacgggggtctccagtatactcatctaccaaagtgagatgccc
ccggccagccaaacacccccatccagcgggcctgctgtccagagcctycccaagtcccca
gaccggcctggctctgccagcccctttgccccgtctgccgctgacctccccagcatgccc
gaaccggccctcacctcccgtgcaggcctgacagaggatgagatgtcccccaccaaatgc
ccagcagctggcggggcctccagcaaacttcccaagtggcctgagagcgtggagcagttc
taccagtcgctacgggacaagtaccaggcccagcccaccggcccggaaggcaccctggtg
gacatggacctggtgagggtgaggctggagaagagcagcgggaagagccaggagagagag
ctggccaccctggactgggcagagcggcagccggcccgagggggtctggccgaggtgctg
ctggccaccagcgaccgccagcagccccgggagacgcgggtgatcgctgtgctgggcaaa
gcgggacatgggaagagtcactgggcccgggccgtgagccgggcctgggcccacggccag
ctgccacagtacgactttgtcttctgtgtcccctgccatcgtttggaccgtccggggacc
tcctaccgcctgcaggatctgctgtcctccctaggcccgcagccgttgccrgtggacgac
gaggtcctcagttacatcgcgaggaggcccaaccgcatcctgctcatcctggatggcttc
gaggacctggaagcccacgatggctccctgcacagcacaggaggccccgggtcggcagag
ccccgctccctccgggggctgctggcgggcctcctccagcgcaagctgctgcagggctgc
accctgctgctcacggcctggcccmggggccgcctggcccagagcctgagcaaggtggac
gccctgtttgaggtggccggcttctcggcccagcaggctgagacctatgtgaggcgttac
tttgagtcggaggggacccctgagcaccaagagagggccctggcgctcctgcaggcccgg
ccattcctcctgagccacagccacagccccaccgtgtgccggaccgtgtgccagctcgcg
gaggccctcctgcagcggagcgatgaagcccagctgccctccacgctcacgggcctctac
gtgggcctgctaggcccagcagctnnnnnnnnnnnnnnnnnggccctggcggaactggcc
aggctggcctgggagctgggccgtgcacaccagaggggcctgaaggcgggctgtttaccg
tcggcggaggcgagggcctgggctgtggcccaaggctggttgcggcccaccccgggggcc
ccrgagacggagctrgccttctccagcttcctcctgcagtgcttcctgggggccgtgtgg
ctggctctgagcggcgaaatcaaggacaaggagctgccgcagtatctggccttgaccccg
aggaagaagcggccctatgacaactggctggagggcgtgccgcgcttcttggtcggactg
gtcttccagcctcgcgccggctgcctgggggccctggcagggccggcggccgccacgtcg
gcggacaggaagcagaaggtgctcacgaggtacctgaagcgtctgcagcccgggacgctg
caggcggggcggctgctggagctgctgcactgtgcccacgaggcgctggaccccgggctc
tggcagcacgtgctgcaggggctccctgcccgcctctccttcctgggcacacggctcacg
cctcctgacacccatgtgctgggcagcgccctggaggccgcgggccgagacttttccctg
gacctccgcagcactggcgttgacgcctctggactggggagcctcgtgggactcagctgt
gtcacccgtttcagggctgcattgagtgacactgtggagctatgggagtccctgcagcag
cgtggggaggccaagctactccgggcagtggaggagaagttcaccatcgagcctttcaag
gccaagtccatgaaggatgtggaagaccttggcaatctcgtgcagatccagaggacaaga
agctcctctgaagcagcagctggggagctccctgctgtccgagacttaaagaagctggag
tttgcgctgggccctgtcttgggcccacaggtttttcctaaactggtgaagatccttgag
gcctttacttcccttcagcatctagacctggactcgctgagcgagaacaagattggggac
gagggtgtcgcccagctctcagccaccttccctcagctgaaggccctggagacactcaac
ttgtcccagaacaacatcaccgacgtgggtgcctgcaagctggccgaggctctgcccgcg
ctggccacgtccctcctcaggttgagcttgtacaataactgtatctgcgacgcgggagcc
gagagcctggcgcacgcgcttccagacatggtgtccctccgggtgctggatgtccagtac
aacaagttcacagccgctggggctcagcagcttgccgctggcctgagaaagtgccctcag
gtgaagacactggcgatgtggacgcccaccatcccctttggcgtccaggaacacctgcag
cagctggacccacgaatcattctgagatga
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