Bos indicus (zebu cattle): 109578978
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Entry
109578978 CDS
T04792
Symbol
BTAF1
Name
(RefSeq) LOW QUALITY PROTEIN: TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
biu03021
]
109578978 (BTAF1)
Transcription machinery [BR:
biu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
109578978 (BTAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
Vac14_Fab1_bd
HEAT_2
TOR1L1_N
ARM_ECM29
UTP20
Motif
Other DBs
NCBI-GeneID:
109578978
NCBI-ProteinID:
XP_019843986
LinkDB
All DBs
Position
26:13991652..14118017
Genome browser
AA seq
1936 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLIYLRSTNWDTRI
AAGQAVEAIVKNVPEWNPVPRTKQETTSESAMEDSSTTDRLNFDRFDICRLLQHGASLLG
SAGAEFEVQDEKSGEVDPKERIARQRKLLQKKLGLNMGEAIGMSTEELFNDEDLDYTPTS
AALVNKQPTLQAAELIDSEFRTGMSNRQKNKAKRMAKLFAKQRSRDAVETNEKSNDSTDG
EPEEKRRKTSNVVINQSAVDSKVLIDNIPDSSPLIEETNEWPLESFCEELCNDLFNPSWE
VRHGAGTGLREILKAHGKSGGKMGDSTLEEMIQQHQEWLEDLVIRLLCVFALDRFGDFVS
DEVVAPVRETCAQTLGVVLKHMNETGVHKTVDVLLKLLTQEQWEVRHGGLLGIKYALAVR
QDVINTLLPKVLTRIIEGLQDLDDDVRAVAAASLVPVVESLVYLQTQKVPFIINTLWDAL
LELDDLTASTNSIMTLLSSLLTYPQVQQCRKFASYVVIFGRYFPAYVRRNAACIWSMKSY
TINKTCYNAFSYLSLFYVCVCMCLSCNFISKFTRCVNKCKRRRSFKSASNENXIKRWTSL
EEPKEQIITLTYSFFLMCFSIEVYISNTLFTLLSTQDQNSSSWLTPILPDMLRHIFQFCV
LESSQEILDLIHKVWMELLSKASVQYVVAAACPWMAAWLCLMMQPSHLPIDLNMLLEVKA
RAKEKTGGKVRQGQSQSKVLQEYIAGADTVMEDPTTRDFVVMRARMMAAKLLGALCCCIC
DPSVNVVTQEIKPAESLGQLLLFHLNSKSALQRISVALVICEWAALQKECRAVTLAVQPR
LLDTLSEHLYYDEIAIPFTRMQNECKQLISSLADAHIEVGNRVNNNVFTIDQANDLVTTV
FNEVTSSFNLNPQVLQQLDSKRQQVQMTVTETNQEWQVLQLRVHTFAACAVVSLQQLPEK
LNPIIKPLMETIKKEENTLVQNYAAQWMAKLLQQCTTRTPCPNSKIIKNLCSSLCVDPYL
TPSVTCPVPTQSGQENSKGSNSEKDGMHHTVTKHRGIITLYRHQKAAFAITSRRGPTPKA
VKAQIADLPAGGSGNLLVELDEAQKPYLVQRRGAEFALTTIVKHFGGEMAVKLPHLWDAM
VGPLRNTIDIHNFDGKSLLEKGDGPAQELVNSLQVFETAAVSMDSELHPLLVLHLPHLYM
CLQYPSTAVRHMAARCVGVMSKIATMETMNIFLEKVLPWLGAIDDNIKQEGAIEALACVM
EQLDVGIVPYIVLLVVPVLGRMSDQTDSVRFMATQCFATLIRLMPLEAGIPDPPNMSEEL
IQLKAKERHFLEQLLDGKKLENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDM
GLGKTLQSICILAGDHCHRAQEYARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREY
LNPLHYTGPPTERIRLQHQVKRHNLVVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGK
TKLSKAVKQLTANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASR
DARSSSREQEAGVLAMDALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYE
DFAKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEF
KNTTEKLAAQNSSLHDIQHAPKLSALKQLLLDCGLGNGSTSESGTESVVAQHRILIFCQL
KSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGL
NLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMN
IANTVISQENSSLQSMGTDQLLDLFTLDKDGKAEKADTSTSGKTSMRSILENLSDLWDQE
QYDSEYSLENFMHSLK
NT seq
5811 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctccaggcttgaccgtctttttatcttgctggatactggcactactccagtt
acaagaaaagctgctgcacagcaacttggagaagtggtgaagcttcatccccatgaactg
aataatctattatctaaagtcttgatatatttaaggagtacaaattgggatactcggatt
gcagcaggacaagctgttgaagctatagtgaaaaatgtacctgaatggaatcccgtgcca
agaaccaaacaagaaactacttcagaaagtgctatggaagactcatctactacagatcga
ttgaattttgacagatttgatatatgtagattgttacaacatggggcatcacttttggga
tctgctggtgcagaatttgaagtacaagatgaaaaatcaggtgaagtggatcctaaggag
aggatagcacgccaacgaaagctgttacagaaaaaacttggccttaatatgggagaagcg
attggaatgagcactgaagagctctttaatgatgaagatttggattataccccaacttca
gcagcccttgtaaacaaacaacctactctccaggccgctgaactgattgactcagagttt
cgaacaggaatgagcaatagacaaaagaacaaagctaaaagaatggccaaattatttgca
aaacagagatccagggatgcagtagaaacgaatgagaagagcaatgatagcacagatggg
gaaccagaagaaaagagacgaaagacatcaaatgttgttattaatcagtctgcagttgat
tccaaagttctgattgataatattccagacagctctcccttaattgaagagacaaatgaa
tggcctttggaaagcttttgtgaagaactttgcaatgacctttttaatccctcctgggag
gttcgacatggtgcaggcactggacttagggaaatccttaaagctcatgggaaaagtggt
ggtaaaatgggagatagcactttagaagagatgattcaacagcatcaagagtggttggaa
gacttggttattagactcctttgtgtgttcgctttagacagatttggagactttgtttct
gatgaagttgtggcaccggttcgtgaaacttgtgctcaaacgttaggtgtggtgttaaaa
cacatgaatgaaacaggagttcataagactgtggatgtgctgcttaaattacttacacaa
gaacagtgggaagttagacatggtggtctgctaggaataaagtatgctttggcagttcgt
caggatgtaattaatactttattgcctaaagttttaactagaataattgaaggactccag
gatcttgatgatgatgtcagagctgttgctgcagcatcattagtacctgtggtagaaagc
cttgtgtatcttcagacacaaaaagtacctttcattataaatacattatgggatgctctt
ctggaactagatgatctaacagcttcaacaaatagtattatgactcttctgtcatccttg
ttaacttatcctcaggttcaacaatgcagaaaatttgcttcatatgttgtgatatttggc
agatactttccagcttatgtaagaagaaatgcagcatgtatttggagcatgaagagttac
actattaacaagacctgctataatgctttttcatatttgagtctattttatgtctgtgtg
tgcatgtgtttaagttgtaattttataagtaaatttactagatgtgtaaataaatgtaaa
aggcgacgttcatttaaatctgcaagtaatgaaaataycattaaaagatggacctcctta
gaggagccaaaagaacagataattacactgacatattcttttttcctcatgtgtttttct
atcgaggtatatatttcaaatactctgttcactttattatcaacacaagaccagaactct
tcatcttggcttacacctatccttcctgatatgcttcgacacatatttcagttttgtgtt
ttagaaagcagccaggaaattctggacctcattcacaaggtttggatggaattgttgagc
aaggcttcagttcagtatgtggtagcggctgcttgtccatggatggctgcatggctttgc
ttaatgatgcagccttctcatttacctattgatttaaatatgttgctggaagtaaaagct
agagccaaagaaaaaacaggtggtaaggtgcgccagggccaaagccagagtaaagtgctt
caggagtacattgcaggtgcagacacygtcatggaagaccccaccaccagggactttgtt
gttatgcgggccagaatgatggccgccaagctgttaggagccctttgttgctgtatttgt
gatccaagtgtaaatgtggtaacccaagaaattaaaccagcagaatcccttggccagtta
ctactcttccatttgaactccaaatctgccttacagagaattagtgtagctttggtaatc
tgtgaatgggctgctttacagaaggagtgtagagctgttaccctagctgtgcagccacgt
ttgcttgataccctttcagaacatttgtattatgatgaaattgccattccatttacacga
atgcaaaatgagtgtaaacagcttatttcatcattagctgatgcacatattgaagttggt
aatagagtaaacaacaacgtttttacaattgatcaagctaatgacctggtcactactgtt
tttaatgaagtcacatcatccttcaatttaaatcctcaagtattacagcagttagatagt
aaacgacagcaggtccaaatgacagttacagagaccaaccaggagtggcaagtgttgcag
ttgagagtgcatacttttgctgcatgtgcagttgtgagcttgcagcaactgccggagaag
ttaaatcctattataaaaccattaatggagacaattaaaaaagaagagaatacgctagtg
cagaactacgcagctcaatggatggccaaactacttcagcagtgcacaacaaggactccc
tgtcccaattcaaaaattattaaaaatctctgtagctcactttgtgtggacccgtatcta
actccttctgtcacatgtccagtaccaacacaaagtggccaggaaaattctaaaggatcc
aactctgaaaaagatggaatgcatcatactgtcaccaagcaccggggtataattacactc
tatcggcatcagaaagctgcttttgctatcacaagtaggcgaggtcctacccccaaagcc
gtcaaagctcaaatagcagatcttcctgcaggaggtagtggaaacctccttgttgaactt
gatgaggcccagaagccttacttggtacaacggagaggagctgagtttgccttgacaact
atagtgaagcattttggtggtgaaatggcagtgaagttgccacatctctgggatgcgatg
gttggcccactgaggaatacaatcgacatacataattttgatggaaagtccctcttggaa
aagggagatggccctgcccaagaactggtgaattctctgcaagtttttgaaacagcagca
gtgtcgatggattctgagcttcatcccctgttggtactgcatttgcctcatctttacatg
tgccttcagtaycccagcactgcagtgaggcacatggctgctcgttgtgtgggcgtcatg
agcaaaatagctaccatggaaacaatgaatatatttttggagaaggttcttccatggctg
ggagcaattgatgacaatatcaaacaggagggtgcaattgaagctcttgcctgtgtcatg
gaacaactggatgttggaatcgttccatacattgtactcttagttgtgcctgtgttggga
aggatgagtgatcagacggacagcgtaagattcatggctacacagtgctttgcaacacta
attagactcatgccacttgaggcaggcattccggaccctccaaatatgtcagaagaatta
atccaattgaaagccaaggaaagacactttttggagcaattgttagatgggaaaaagtta
gaaaattacaagattccagtaccaatcaatgctgaactcagaaaatatcaacaggatggt
gtgaactggttagcatttcttaataagtataagcttcatggaattctgtgtgatgacatg
ggtttagggaagactttacagtccatctgtattctagcaggagatcactgtcacagggcc
caggaatatgcaagatcaaaattggcagaatgtatgccacttccttccttggtggtttgt
ccaccaacattaacaggtcattgggtggatgaagtaggtaaattttgctccagagaatat
ctcaatccactgcattacactggacctcctactgaaagaataaggttacagcaccaggtc
aaaaggcacaatctcgtagtggcttcctatgatgttgtgagaaatgacatagatttcttt
agaaatattaagtttaactactgtattcttgatgaaggccatgtcatcaaaaacggaaaa
acaaaattgtcaaaagcagtaaaacaactgactgctaattacaggattattctttctgga
acaccaatccagaacaacgttttggagctgtggtcattatttgatttcctcatgccagga
tttttggggactgaacgccagtttgctgctcggtatggtaaacctatattagcaagtagg
gatgctcgaagctccagtcgagaacaagaagcaggtgttcttgcaatggatgcactgcac
cgccaggtcctgccatttcttttgagaagaatgaaagaagatgttttacaggatctgcca
cccaaaattattcaagactattattgcactctcagtcctctccaggttcagctctatgag
gattttgctaagtctcgtgccaagtgcgatgttgatgaaacagtttcttcagctgcactt
tctgaagaaaccgaaaaaccaaagcttaaagctacaggtcatgtattccaggcattacag
tacttacgtaaactgtgcaaccatccagcattagtcttaacacctcagcatccggagttc
aagaatactactgaaaaacttgcagctcagaattcttctctccatgatattcagcatgcc
cctaaactctcagctttgaaacaattgctgttggactgtggtttgggaaatggcagtact
tctgagagtggcacagagtctgtagtagcccagcacaggatactgatcttctgtcaactt
aaaagcatgctggatatagtggagcatgatcttctcaaacctcatttaccctctgtcacc
tacttgagattggatggtagcatacctcctggtcagaggcactccattgtttcacggttt
aacaatgatccatccatagatgttcttttacttacaactcatgttggtggcctggggctt
aacttaacaggcgctgatacggtggtatttgtggagcatgactggaatcccatgcgtgat
ctacaagccatggaccgggcccaccgcattgggcagaaacgtgtggttaatgtgtaccga
ttgataaccagaggaacactggaagagaaaataatgggtttgcagaaattcaagatgaac
atagcaaatactgttattagccaagagaattctagtttgcagagtatggggacagatcaa
ctccttgatctgtttactcttgataaggatggcaaagcagaaaaagctgacacctctact
tctggaaaaacaagtatgagatcaattcttgaaaatctgagtgatctttgggatcaagag
caatatgattcagagtacagcctggaaaattttatgcattctctcaaataa
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