Bos indicus (zebu cattle): 109579116
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Entry
109579116 CDS
T04792
Symbol
CSTF2T
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant
KO
K14407
cleavage stimulation factor subunit 2
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109579116 (CSTF2T)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109579116 (CSTF2T)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
109579116 (CSTF2T)
U7-dependent histone pre-mRNA processing factors
109579116 (CSTF2T)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
DUF8400
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
109579116
NCBI-ProteinID:
XP_019844175
UniProt:
A0A6P5E410
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Position
26
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AA seq
642 aa
AA seq
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MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPID
PEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMR
IMDPEIALKILHRKIHVTPLIPGKSQSVSGPGPGLCPGPNVLLNQQNPPAPQPQHLARRP
VKDIPPLMQTPIQGGIPPQGPMPAAVPGPGPLTPGGTMQPQVGMPGVGPVPLERGQVQIS
DPRAPMPRGPMTAGGLPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGPPMHHAA
GHDSRGPSSHEMRGGPLADPRMLMSEPRGPMIDQRGLPMDGRGSRDSRGMETRAMETEVL
ETRVMERRGMETCAMETRAMEARGMDARGMEMRGPGPSSRGPMTGGIQGPGPINMGAGGP
QGPRQVPSISGVGNPGPGMQGAGMQGGGMQGAGLQGAGMQGAGMQGGGMQGPGMQGAGMQ
GPGMQGAGMQGAGMQGAGMQGAGMQGAGMQGPGMQGAGKQGGGQPSSFSPGQSQVTPQDQ
EKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGTS
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttggcggtgagagacccggcaatggatcgatcactgcgttccgtgttcgtg
gggaacattccgtatgaggcgactgaggagcagttaaaggacattttctcggaggttggt
tctgttgtgagtttccggctggtatacgatagagagacgggcaaacctaagggttatggc
ttctgcgagtaccaagaccaggagaccgcacttagtgccatgcggaaccttaatgggcgg
gagttcagcgggagagcgcttcgggtggacaatgcagccagtgaaaagaacaaggaggag
ctaaagagcctagggcctgcagcgcctatcattgactcaccctacggggaccctatcgat
ccagaagatgctccagagtcgattaccagagcagtcgctagtcttcccccggagcaaatg
tttgagctgatgaagcagatgaaactctgtgtccaaaacagccaccaggaagctcgaaat
atgttacttcaaaacccacagctggcttatgcgctgttgcaggcacaagtagtgatgaga
atcatggatccagagattgctctgaaaattttgcatcgcaaaattcatgtcacaccactc
atcccagggaaatctcaatccgtttctggccctggccctgggctctgtcctggacctaac
gttctgctraaccagcagaaccccccggcccctcagcctcaacatttggccagaagacct
gtgaaagacatccctcctctgatgcagacccctatccaaggtggaattccaccccaaggc
ccaatgccagccgcagttcctggccctggccccttaactcctggcggaacaatgcagccc
caagttggaatgccaggggttggtccygtgcccttagagcgggggcaggtgcagatatct
gatcccagagctcctatgcctcgtgggcctatgactgctggtggcctgcctcctcgagga
ctgttaggggatgctccaaatgacccacgtggagggactttgctttcagtcaccggagaa
gtggagcccagaggctatcttggcccaccacatcagggtcctccaatgcaccatgccgct
ggtcatgacagccggggcccttcctcacatgagatgaggggagggcccttagcagatcct
agaatgctcatgagtgagcccagaggacctatgatagaccaaagggggctacctatggat
ggcagaggcagcagagactctcgagggatggagactcgagccatggaaacagaggtcttg
gagacacgagtgatggagagaagaggaatggagacctgtgcaatggaaaccagagcaatg
gaagcgagaggcatggatgcaagaggaatggagatgaggggccctggccccagttcgaga
ggccctatgactgggggaattcagggtcctggtcctattaatatgggggcaggtggtcct
cagggacccagacaggttcccagcatttcaggggtgggaaaccctggacctggcatgcag
ggggcaggtatgcaaggaggtggcatgcagggggcgggcttgcaaggagctggcatgcag
ggggcgggcatgcaaggaggtggcatgcaggggccaggcatgcaaggagcgggcatgcag
gggccgggcatgcaaggagctggcatgcagggggcgggcatgcaaggagctggcatgcag
ggggcgggcatgcaaggagctggcatgcaggggccgggcatgcaaggagctggcaagcag
ggtggaggccagcctagcagttttagtcctgggcagagccaagtaaccccccaggatcaa
gaaaaggcagctttgatcatgcaggttcttcagctgactgcagatcagattgccatgctg
cctcctgagcaaaggcagagtatcttgattttaaaggaacaaatccagaaatctactgga
acttcttga
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