Brenneria izadpanahii: HC231_01260
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Entry
HC231_01260 CDS
T07407
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
biz
Brenneria izadpanahii
Pathway
biz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
biz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HC231_01260 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biz03019
]
HC231_01260 (rhlB)
Enzymes [BR:
biz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HC231_01260 (rhlB)
Messenger RNA biogenesis [BR:
biz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HC231_01260 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
CCDC138_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QTF06713
UniProt:
A0ABX7UMD9
LinkDB
All DBs
Position
complement(280248..281537)
Genome browser
AA seq
429 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPQVIEALESKGFHNCTPIQALALPLTLSGRDVAGQAQTGTGKT
LAFLASTFHYLLSHPASAERQVNQPRALIMAPTRELAVQIHSDAEALSRLTGLKLGLAYG
GDGYDKQLKVLESGVDILVGTTGRLIDYTKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPVTQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLLEEEWPDRCIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
DFTHGNLDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGESGFSISLA
CEEYALNLPAIETYIGHHIPVSKYNSDALLNDLPAPKRLTRPPRANNSARRHNTPRRSGA
PRTNRKRQG
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttaactgaacagaagttttccgacttcgccctgcacccgcaggtt
atcgaagcccttgaaagtaaagggtttcataactgcacaccgatccaggcgttagcattg
ccgctgactttgtcagggcgtgatgtcgcaggtcaggcgcaaaccggtactggcaagacg
ctggcttttctcgcgtctactttccattatttgctttcacaccccgctagcgcggagcgt
caggtcaatcagccgcgcgcgttaatcatggcgccgacccgtgaattagccgtgcagatt
cactccgacgcagaggcgctttcccgtctgacaggcctgaaactcggtcttgcctatggc
ggcgacggttatgataaacagctcaaggtgctggaaagcggcgtcgatattctggttggc
accacgggccgcctgatcgactacaccaaacaaaaccacattaatctgggagcgatccag
gttgttgtgctggatgaagccgatcgcatgtacgatctcggctttatcaaagatattcgc
tggctgttccgccgcatgccgccggtgacccagcgcctgaatatgctcttttccgcgacg
ctctcctaccgcgtgcgtgaacttgcctttgaacaaatgaataatgcggaatacgtggaa
gtcgaaccggagcaaaaaaccggacatcgcattaaagaagagctgttttatccgtctaat
gaagaaaaaatgcgcctgttgcagacacttcttgaggaagagtggcccgatcgctgcatt
attttcgccaataccaaacaccgttgtgaggatatctggggtcatttagccgccgacggc
catcgtgtcggtctgttgaccggcgacgtggcgcaaaagaaacgcctgcgaattctggat
gatttcactcacggcaatctggatattctggtggcgacggacgtcgcggcgcgcggcctg
catattccgtccgtcactcacgtattcaactacgatctgccggacgattgcgaagactat
gttcaccgtatcggccgcaccggccgcgcgggcgaaagcggtttctccatcagtcttgcc
tgcgaagaatatgcgctgaatttgccggcgattgaaacctatatcggccaccatattccg
gtcagtaaatacaatagcgacgccctgcttaacgatttaccggcccccaaacgtttaacg
cgcccgcctcgcgccaacaacagcgcgcgcaggcacaatacgccgcgccgcagcggagcg
cctcgcactaatcgtaaacggcagggttga
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