KEGG   Brenneria izadpanahii: HC231_01470
Entry
HC231_01470       CDS       T07407                                 
Symbol
uvrD
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
biz  Brenneria izadpanahii
Pathway
biz03420  Nucleotide excision repair
biz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:biz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HC231_01470 (uvrD)
   03430 Mismatch repair
    HC231_01470 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:biz03400]
    HC231_01470 (uvrD)
Enzymes [BR:biz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HC231_01470 (uvrD)
DNA repair and recombination proteins [BR:biz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HC231_01470 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     HC231_01470 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 AAA_22 DUF4391
Other DBs
NCBI-ProteinID: QTF06748
LinkDB
Position
323598..325760
AA seq 720 aa
MDVSALLDGLNDKQRDAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDGEDQL
RLLKRLIRALNLDEKQWPPRQAMWYINGKKDEGLRPQHIESYGNPIEQTWQRVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNRIQYAWIRMLAGDS
ANVMIVGDDDQSIYGWRGAQVENIQLFLQDFAGAQTIRLEQNYRSTSNILNAANALIAHN
GGRLGKNLWTDGVEGEPISLYCAFNELDEARFVVNRIKVWQENGGALSDNAILYRSNAQS
RVLEEALLQQSMPYRIYGGMRFFERQEIKDALAYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDRQLTLWQSTRALLQEKALAGRAASALQRFVELVDSLADETAELPLHVQ
TDRVIKDSGLWSMYEQEKGEKGQARVENLEELVTATRQYSYQDEDQDLMPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMRKLTLTYAESRRLYGKEAYHRPSRFVGELPAECVEEVRLRASVSRPVNHQRLG
TPVSENDSGYRLGQRVRHAKFGEGTIVNLEGSGDHCRIQVAFQGQGIKWLVAAYARLETV
NT seq 2163 nt   +upstreamnt  +downstreamnt
atggacgtttctgctctacttgatggcctcaacgacaaacaacgtgatgcggtagccgcg
ccgcgcagcaatttattggtgttggcgggcgcgggcagcggcaagacgcgggtgctggtg
caccgcatcgcctggctgttgtccgtcgaaaattgttctccctactccatcatggcggtg
acgttcaccaacaaggccgcggcggaaatgcgtcaccgtatcgaacacctgatcggcacc
agccagggcggcatgtggattggcaccttccatgggttggctcaccgcctgctgcgggcg
catcatctggatgccggtctgccgcaggatttccagatcctggacggcgaagatcaactg
cggttgcttaaacgtctgatccgcgcgctgaatctggatgagaaacagtggccgccgcgt
caggccatgtggtacatcaacggcaagaaagatgagggtttgcgtcctcaacatattgaa
agttacggcaatccgatagaacaaacctggcagcgggtttatcaggcctatcaggaagcc
tgcgatcgcgccgggctggtggattttgccgaactgctgctgcgcgcgcatgaactatgg
ctgaataagccgcatatcctgaatcactatcgcgagcgtttcaccaatattctggtggat
gagtttcaggataccaaccgtattcaatacgcctggatccgcatgctggccggcgacagc
gccaatgtgatgattgtgggggatgacgaccagtcgatctacggctggcgcggcgcgcag
gtggaaaacattcagctgtttcttcaggatttcgccggcgcgcaaacgatccggctggag
cagaattaccgttcaaccagcaatatcctgaatgcggccaatgccctgattgcgcataac
ggcgggcgtctgggcaaaaacttatggacggatggcgtagagggcgagccgatttcgctc
tactgcgcgtttaacgaactggatgaagcgcgctttgtggtcaaccggattaaggtctgg
caggaaaacggcggcgcgctgagcgataacgcgatcttgtaccgcagcaatgcccagtcg
cgcgtgctggaagaggctttgctgcagcagagcatgccgtaccgtatttatggcgggatg
cgcttcttcgaacggcaggaaatcaaggacgccctggcttacctgcgtttgatcgccaac
cgcaatgacgatgcggcgtttgagcgggtggtgaatacgccgacgcgcggcattggcgac
agaacgctggatgtggtgcgtcagaccgcccgcgatcggcagttgacgctttggcagtcg
acgcgcgcgctgttgcaggagaaagcgctggcgggcagggcggcgtccgcgctgcaacgc
tttgtcgaactggttgactcgctggcggatgaaaccgccgaactgccgctgcacgtgcag
accgaccgggtgatcaaagactccggcctgtggagtatgtacgaacaggaaaaaggcgaa
aaagggcaggcgcgggtggaaaaccttgaagaattggttaccgcgacgcggcagtacagc
tatcaggatgaggatcaggatctgatgccgttacaggcgtttctatcccatgcggcgctg
gaagcgggagaagggcaggcggacgcctatcaggatgcggtgcagctgatgacgctgcat
tcggcaaaaggattggagttcccgcaggtatttatcgtcggaatggaagagggcatgttc
cccagccagatgtcgctggatgagggcggccggctggaggaggagcggcgtctggcctat
gtgggcgtgacgcgcgccatgcggaaattgacgttgacgtacgcggaatcgcggcgttta
tacggcaaagaagcttatcaccggccttcccgttttgtcggcgaactgccggcggagtgc
gttgaagaggttcggctgcgggccagcgtgtcgcgcccggtcaaccatcagcgtcttggc
acgccggtcagcgagaacgacagcggctatcgtctggggcagcgggtgcggcacgccaaa
ttcggcgagggcaccatcgtcaacctggagggcagcggcgatcattgccggattcaggtg
gcgttccaggggcagggcattaagtggctggtggcggcttatgcccggctggagacggta
tga

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