Brenneria izadpanahii: HC231_01470
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Entry
HC231_01470 CDS
T07407
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
biz
Brenneria izadpanahii
Pathway
biz03420
Nucleotide excision repair
biz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
biz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HC231_01470 (uvrD)
03430 Mismatch repair
HC231_01470 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
biz03400
]
HC231_01470 (uvrD)
Enzymes [BR:
biz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HC231_01470 (uvrD)
DNA repair and recombination proteins [BR:
biz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HC231_01470 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HC231_01470 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
DUF4391
Motif
Other DBs
NCBI-ProteinID:
QTF06748
LinkDB
All DBs
Position
323598..325760
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSALLDGLNDKQRDAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDGEDQL
RLLKRLIRALNLDEKQWPPRQAMWYINGKKDEGLRPQHIESYGNPIEQTWQRVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNRIQYAWIRMLAGDS
ANVMIVGDDDQSIYGWRGAQVENIQLFLQDFAGAQTIRLEQNYRSTSNILNAANALIAHN
GGRLGKNLWTDGVEGEPISLYCAFNELDEARFVVNRIKVWQENGGALSDNAILYRSNAQS
RVLEEALLQQSMPYRIYGGMRFFERQEIKDALAYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDRQLTLWQSTRALLQEKALAGRAASALQRFVELVDSLADETAELPLHVQ
TDRVIKDSGLWSMYEQEKGEKGQARVENLEELVTATRQYSYQDEDQDLMPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMRKLTLTYAESRRLYGKEAYHRPSRFVGELPAECVEEVRLRASVSRPVNHQRLG
TPVSENDSGYRLGQRVRHAKFGEGTIVNLEGSGDHCRIQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgctctacttgatggcctcaacgacaaacaacgtgatgcggtagccgcg
ccgcgcagcaatttattggtgttggcgggcgcgggcagcggcaagacgcgggtgctggtg
caccgcatcgcctggctgttgtccgtcgaaaattgttctccctactccatcatggcggtg
acgttcaccaacaaggccgcggcggaaatgcgtcaccgtatcgaacacctgatcggcacc
agccagggcggcatgtggattggcaccttccatgggttggctcaccgcctgctgcgggcg
catcatctggatgccggtctgccgcaggatttccagatcctggacggcgaagatcaactg
cggttgcttaaacgtctgatccgcgcgctgaatctggatgagaaacagtggccgccgcgt
caggccatgtggtacatcaacggcaagaaagatgagggtttgcgtcctcaacatattgaa
agttacggcaatccgatagaacaaacctggcagcgggtttatcaggcctatcaggaagcc
tgcgatcgcgccgggctggtggattttgccgaactgctgctgcgcgcgcatgaactatgg
ctgaataagccgcatatcctgaatcactatcgcgagcgtttcaccaatattctggtggat
gagtttcaggataccaaccgtattcaatacgcctggatccgcatgctggccggcgacagc
gccaatgtgatgattgtgggggatgacgaccagtcgatctacggctggcgcggcgcgcag
gtggaaaacattcagctgtttcttcaggatttcgccggcgcgcaaacgatccggctggag
cagaattaccgttcaaccagcaatatcctgaatgcggccaatgccctgattgcgcataac
ggcgggcgtctgggcaaaaacttatggacggatggcgtagagggcgagccgatttcgctc
tactgcgcgtttaacgaactggatgaagcgcgctttgtggtcaaccggattaaggtctgg
caggaaaacggcggcgcgctgagcgataacgcgatcttgtaccgcagcaatgcccagtcg
cgcgtgctggaagaggctttgctgcagcagagcatgccgtaccgtatttatggcgggatg
cgcttcttcgaacggcaggaaatcaaggacgccctggcttacctgcgtttgatcgccaac
cgcaatgacgatgcggcgtttgagcgggtggtgaatacgccgacgcgcggcattggcgac
agaacgctggatgtggtgcgtcagaccgcccgcgatcggcagttgacgctttggcagtcg
acgcgcgcgctgttgcaggagaaagcgctggcgggcagggcggcgtccgcgctgcaacgc
tttgtcgaactggttgactcgctggcggatgaaaccgccgaactgccgctgcacgtgcag
accgaccgggtgatcaaagactccggcctgtggagtatgtacgaacaggaaaaaggcgaa
aaagggcaggcgcgggtggaaaaccttgaagaattggttaccgcgacgcggcagtacagc
tatcaggatgaggatcaggatctgatgccgttacaggcgtttctatcccatgcggcgctg
gaagcgggagaagggcaggcggacgcctatcaggatgcggtgcagctgatgacgctgcat
tcggcaaaaggattggagttcccgcaggtatttatcgtcggaatggaagagggcatgttc
cccagccagatgtcgctggatgagggcggccggctggaggaggagcggcgtctggcctat
gtgggcgtgacgcgcgccatgcggaaattgacgttgacgtacgcggaatcgcggcgttta
tacggcaaagaagcttatcaccggccttcccgttttgtcggcgaactgccggcggagtgc
gttgaagaggttcggctgcgggccagcgtgtcgcgcccggtcaaccatcagcgtcttggc
acgccggtcagcgagaacgacagcggctatcgtctggggcagcgggtgcggcacgccaaa
ttcggcgagggcaccatcgtcaacctggagggcagcggcgatcattgccggattcaggtg
gcgttccaggggcagggcattaagtggctggtggcggcttatgcccggctggagacggta
tga
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