Brenneria izadpanahii: HC231_02570
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Entry
HC231_02570 CDS
T07407
Symbol
mscM
Name
(GenBank) miniconductance mechanosensitive channel MscM
KO
K22051
miniconductance mechanosensitive channel
Organism
biz
Brenneria izadpanahii
Brite
KEGG Orthology (KO) [BR:
biz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
biz02000
]
HC231_02570 (mscM)
Transporters [BR:
biz02000
]
Other transporters
Pores ion channels [TC:
1
]
HC231_02570 (mscM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
DUF3619
Motif
Other DBs
NCBI-ProteinID:
QTF06942
LinkDB
All DBs
Position
complement(547720..551046)
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AA seq
1108 aa
AA seq
DB search
MRLIAIFLLGCLLSTASLAAQLPNEAQLRQQLQLAEANKGAADQASIIEELQSALNTLQE
RNESRERAAQYQRVIEDFPKLIQELRRQITAEDDKPTTISESLSVNDLEQQALQVSSQLL
EQGRQLQQEQDRLREVIDSLGQLPQQQTEASRALSDIERRIQLLGTPPSPLGQAQLTALQ
AEAALSKSRVDELELAQLSASSRQELSRLRVELYKKRHDNLDIQLQSLRSRINSLRQREA
EQALEKTELLAEQSGDLPSIISEQLKINRELSVSLNQQAQRMDLIASQQRQATTQTLQVR
QALSTIREQAQWLGVSPVLGETLRAQIARLPEMPQPQRLDSDMAQLRVQRLHFEDLINKP
HDIDQAKQDDGTPLTSTQQRILTEQLRTQRNLLSSLISGCDTQILELTKLKVANSQLEDA
LNDTREAAHRYLFWVADVDPITFSYPLTLVQELTRLLSLDTLTQLSSAMVMMVTSRETVI
PLLGALLLVGFSVSSRRHYHAFLERASSRVGKVTLDRFTLTLRTVFWSILTALPLPVLWA
AWGYGLQNAWPYPMAVAIGDSVTATVPLMWVVMISASFAHPQGLFIAHFRWSPERVARAM
RYYRLSIAFIVPLIMALITFDKLNDREFSSSLGRLCFILLCMALSLVTTGLKRSGIPLYL
DKEGSGENPVNRAMWNLLICVPLIAALASCIGYLATAKALLVRLETSVAIWFFLLVIYYI
IRRWMLIQRRRIAFDRAKHRRSEILAQRARGEDDSSSAASYESSSEAVEEPVVDLDAISA
KSLQLVRSILTLIALVSVIVLWSEIHSAFAFMGNISLWDVTSTVKGVESVQPITLGDVLI
AVLIFVITAQLVRNLPALLELALLQHLSLSPGSGYAITTISKYILMLIGCMMGFSLIGIE
WSKLQWLVAALGFGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRELTGSIMRINTRA
TTISDWDRKEIIVPNKAFITEQFINWSLSDSVTRVVLTIPAPADADSKEVTDLLMDAVSR
CSLILDSPAPEAFLVDLQQGVQIFELRIFAAEMGHRMPLRHELHQLILENYRKHNLIMPY
PPFQVRMESLSRKGRTMSSGSGRTSGGL
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtctgattgcgatttttctgctgggatgtctgttatcaaccgcttcattggccgca
cagttacccaatgaagcacagttgcgccagcaattgcagctcgcagaagcgaacaaaggc
gccgccgatcaggcatcgattatcgaagagctccagtccgcgctgaacaccctgcaggag
cgtaatgaatcccgtgagcgcgcggcgcaataccagcgcgtcatcgaagactttcccaag
ctgatacaggaactgcgccggcagataacggcggaagacgacaagccgacgacaatttcg
gaaagcctttccgttaacgatcttgagcaacaggctttacaggtcagcagccaactcctg
gaacagggccgtcaactccagcaagagcaggatcggctgcgggaagtcatcgattctctg
gggcaactaccccaacagcaaaccgaagccagccgtgcgctcagcgacatcgaacgccgc
atccagctgctgggtacgcccccgtccccgttgggccaggctcaactcaccgctctgcag
gcggaagcggctctgagtaaaagccgggttgatgagctggaactggctcagctatccgcc
agcagccgtcaggaattatcccgtttacgcgtcgagctatataaaaagcgtcacgataat
ctggatatccagctacagagcttgcgcagtcgcatcaatagcctgcgtcaaagagaagcc
gagcaggcgcttgaaaaaacagagctgctggcggagcaaagcggcgacttgccttccatc
atcagcgaacaattgaaaatcaaccgtgaactgtccgtttccctgaatcaacaggctcag
cggatggatctgatcgcttcccagcaacgccaggccacgacacaaacgctacaggtgcgt
caggcgctaagcaccatccgcgaacaggctcagtggctcggcgtatcgccggtactgggg
gaaacgttgcgggctcagatcgcccggctgccggaaatgcctcaaccgcaaaggctggac
agcgatatggcgcagctgcgcgtgcaacgtctgcattttgaggatttgattaataagccc
cacgacattgatcaagccaaacaggacgacggcacgccgctgaccagcacgcagcagcgt
atcctgaccgagcagctgcgtacccagcgcaatctgctgagctcattaatctccggctgt
gatacgcaaattctggagctcaccaagctcaaggtcgccaacagccagttggaagatgcc
ttaaacgacacgcgggaagcggcccaccgctatcttttctgggttgccgatgttgacccc
atcacattctcctatccgctgacgctggtgcaggaactcacccgcttgctgtcgctggat
accctgacccaactcagcagcgccatggtgatgatggtcaccagccgcgaaaccgtgatc
ccgctgctgggggcgctgctgctggtaggattcagcgtcagctcccgccgtcattatcat
gcttttctggagcgcgccagcagccgggtgggtaaggtgacgctcgaccgctttacgctg
acgttacgaaccgtattctggtcgattctgacggcgctgccgctgccggtgctctgggcc
gcatggggttacgggttgcaaaatgcctggccttatccgatggccgtagccatcggcgac
agcgtaaccgccaccgtgccgttaatgtgggtggtgatgatcagcgcatcattcgctcat
ccgcagggactgtttattgcccacttccgctggtcgcccgaacgggttgcccgcgccatg
cgttattaccgtctgtcgatcgcctttatcgtgccgttgattatggcgctgatcaccttt
gataaacttaacgatcgtgaattctccagttcgctgggacgtctgtgctttatcttgctg
tgcatggcgctgagcctggtcaccaccgggttgaagcggtcaggtattccgctttatctg
gataaggaagggtcgggagaaaacccggttaaccgggcaatgtggaatctgttgatttgc
gtcccgctgattgccgcgctggcgtcctgcattggctatctggctaccgccaaggctttg
ctggtgcggttggaaacctcggtcgccatctggtttttcctgttggtgatttattacatt
atccggcgctggatgctcattcagcgccggcgcatcgctttcgatcgcgccaaacatcgc
cgctcggaaattctggcgcaacgcgcccgcggcgaagatgattcctcctccgccgcatct
tatgaaagcagttcggaagcggttgaagagccagtggtcgatttggacgccatcagcgcg
aaatcattgcagttggtccgctcgatcctgacgttgatcgcgttggtttcggtaatcgtg
ctgtggtctgaaattcattccgcgtttgccttcatgggaaatatcagcctgtgggatgta
accagtacggtaaaaggcgttgaaagcgttcagcccattacgctgggcgacgtccttatc
gccgtgcttattttcgttattaccgcgcagctggtgcgcaacctgcccgcattgcttgaa
ctggcgctattacagcatctgagtctctcccccggcagcggctacgccatcaccactatc
agcaaatatattttgatgctgattggttgcatgatgggattttcgctcatcgggattgag
tggtccaaattgcagtggctggtcgccgcattaggcttcgggctggggttcggcttacag
gaaattttcgccaactttatctccgggctgataatcctgtttgaaaaaccgattcgtatc
ggcgataccgtgacgatccgcgaactcaccggcagcatcatgcgcatcaataccagggcg
accaccatatccgactgggaccgcaaagagatcatcgtgccgaataaagcgttcatcacc
gaacagttcatcaactggtcgttatctgactcggtaacgcgcgtggtgttaaccataccg
gctcccgcggatgcagacagcaaagaggttacggatttgcttatggacgcggtcagccgc
tgctcgctgattttggatagtcctgcgcccgaagcattcctggtcgatttacagcagggc
gtgcaaatcttcgaactgcgtattttcgcggcggaaatggggcatcgcatgccgttgcgc
cacgagcttcatcaattaattctggaaaattaccgtaaacacaatctgatcatgccatac
ccgccattccaggtgcggatggaaagcctgtcgcgtaagggaagaacgatgtcgtcgggc
agcggccgaacttctggcggattataa
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