Brenneria izadpanahii: HC231_04205
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Entry
HC231_04205 CDS
T07407
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
biz
Brenneria izadpanahii
Pathway
biz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
biz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HC231_04205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
biz03000
]
HC231_04205
Transcription factors [BR:
biz03000
]
Prokaryotic type
Helix-turn-helix
Other families
HC231_04205
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
GAF
Sigma54_activ_2
GAF_2
HTH_8
AAA_5
AAA
bpMoxR
GAF_3
AAA_16
Parvo_NS1
HTH_30
HTH_1
nSTAND3
AAA_6
Motif
Other DBs
NCBI-ProteinID:
QTF10671
UniProt:
A0ABX7UXX6
LinkDB
All DBs
Position
956065..957654
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AA seq
529 aa
AA seq
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MTVAGIERSVLKPLSFTCLLGECRSELLPLLSEVSKVVSAEGSLSKTLKLVLELMKQHLQ
VTRAMISLYDASCDQIFIHESFGLSKEEAEKGVYYPGEGITGKVVENKQPIIVPDIADDP
RFLNRTGSWDKNEDRNLSFICVPIIRGMKVMGTIGIERRYNNDQLLYLDLEVLRIIATTT
AQAVELHLLERAHKKVLRDQDSLLKRTLRETFKPTNIIGNSRVMQSVYQLIEKVSHARTT
VLILGESGVGKERVASAIHYNSPCANGPFVKFNCSSLPEGIIESELFGHEKGAFTGATSR
RAGRFEEADGGTIFLDEIGELTPLAQAKLLRVLQERCFERVGSNETIKVNVRILAATHRN
LPEMVANGAFREDLYYRLNVFPITIPPLRDRGNDILILADHFNAHFAKELGIDVPTIATP
ALNLLLSYSWPGNVRELENTMERAVLLADEGFIHSYHLPINLQPVLLGETVTGLEAQLAR
IEYDIIVESLARNQGNISRTAAQLGMTRRALSLRMEKYQLNYKAYRSGN
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcgcaggtatagagcggagtgttttaaaaccgctgtcgtttacctgtttgctg
ggtgagtgccgttccgagttgctgccgctgctttccgaagtcagtaaagtggtcagcgcg
gaaggttcgctgtccaaaaccttaaagctggtgcttgagttgatgaaacagcaccttcag
gtgacccgggcgatgatcagcctttatgacgccagctgcgatcagatctttatccatgaa
agtttcggcttgtctaaagaagaggccgagaagggcgtctattaccccggcgaaggcatc
accgggaaagtggtggaaaacaaacagccgattattgtgccggatatcgccgacgatccc
cgttttctgaaccgtaccggcagctgggataaaaacgaggatcgcaacctgtcgtttatc
tgcgttcccattatccgcggtatgaaagtcatgggaacgatcggcattgaacgccgctac
aacaacgaccaactgctctatctggatctggaagttctgcggattatcgccaccaccacc
gcgcaggcggttgagctgcatctgttggaacgcgcgcataaaaaagtgctcagggatcag
gattcgctgctaaagcgtacgctgcgggaaaccttcaagcccactaatatcatcggtaat
tcgcgggtgatgcagtccgtttatcaactgattgagaaagtcagccatgcccgcaccacc
gtattgatcctgggcgaaagcggcgtcggcaaagagcgcgtcgccagcgcgatccattac
aacagcccctgcgccaacgggccttttgtcaaatttaactgctcctcgctgcccgaaggc
atcatcgaaagcgaactgttcgggcatgaaaaaggggcgtttaccggcgcgacgtcccgg
cgggccgggcgttttgaagaggcggacggcggcaccatctttctggatgagatcggcgaa
ctgacgccactggcgcaggcaaagctattgcgcgtattgcaggagcgctgttttgagcgc
gtgggcagtaatgaaaccatcaaggtgaacgtgcgcattctggcggcgacgcaccgcaat
ttgcctgaaatggtcgccaacggcgcgttccgcgaggatctgtattatcgcctgaatgtg
tttccgatcaccattcccccattgcgcgatcgcggcaacgatatcctgattctggccgat
catttcaatgcccatttcgccaaagagctggggattgatgtgccgaccatcgccaccccc
gctttgaatctgctgctgagctatagctggccgggcaacgtgcgtgaactggagaacacc
atggagcgggccgtattgctggcggatgaaggcttcattcatagctaccatctgccgatt
aatctgcaaccggtgctgctgggggaaaccgtgaccggtctggaagcgcagttggcgaga
atcgagtacgacatcatcgttgaatcgctggcgcgcaatcagggaaatatttcccgcacg
gcggcgcagttgggtatgacccggcgggcgctgagcctgaggatggaaaaatatcagctg
aattataaagcgtaccggagcggaaattag
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