Brenneria izadpanahii: HC231_04210
Help
Entry
HC231_04210 CDS
T07407
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
biz
Brenneria izadpanahii
Pathway
biz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
biz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HC231_04210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
biz03000
]
HC231_04210
Transcription factors [BR:
biz03000
]
Prokaryotic type
Helix-turn-helix
Other families
HC231_04210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
Mg_chelatase
AAA_5
AAA_16
AAA
HTH_1
HTH_23
HTH_35
Motif
Other DBs
NCBI-ProteinID:
QTF07222
LinkDB
All DBs
Position
957658..958812
Genome browser
AA seq
384 aa
AA seq
DB search
MENTKRASPGHAEEEAFPRSGGGRSKKKPHSVHEVSRIITRSFAMKRVMEKVARFAPTLS
PILLRGEPGTGKDVIARAIHAQSTLRRRAFIKLSCDYSNDEQAIMALLGSDESGNQHPGA
ISLVNDGTLFLSEVGLFSLRMQKCLLRLLQEKEYMPLAGSRALPCKMRLVCATERNLEQM
VAAGDFLPELYYRLHVATIALPALRDRQEDIPELVNYFFERFNRVNNLNLSMTETALSPL
YLCNWPANVRDLENCLEYASLHREGDIINQLPCLTERCMRQKLNLKISNYMQSAAEEPAV
APEPAAAEFDAPLRWEPCATLPHVVMPIAGGSGGYDASDEIRHRIIAALEKSGWVKAKAA
RLLNLTPRQLSYALQKLQIEVKKF
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataccaaacgcgccagtcccggacatgcggaggaggaggctttcccgcgctcc
ggcggcggaagatcgaaaaagaagccccattcggtacatgaggttagccggattattacc
cgttcgttcgccatgaagcgggtgatggaaaaggtggcgcgctttgcgccgacgctatcg
ccgatattgttgcgcggcgaacccggaaccggcaaggatgttatcgccagggccatccat
gcgcaatcgacgctccgccgccgcgcgtttatcaagttaagctgcgattattccaatgat
gagcaggcgatcatggcgctgctagggagcgatgaaagcgggaatcagcatccgggggct
atctctctggttaacgacggcacgctctttttaagcgaagtcggcctgttttcattgcgt
atgcaaaagtgcctgctgcgtctattgcaggaaaaagagtacatgccgctagcgggaagc
cgggcgctgccctgcaagatgcggcttgtttgcgcgacggaaagaaatcttgaacagatg
gtcgccgccggcgacttcttgccggaattatattaccggctgcatgtcgccaccattgcg
ttgccggcgctgcgcgatcgtcaggaagatattcccgaactggtcaattattttttcgaa
cgctttaaccgcgtgaataacctgaatctctcgatgacggaaaccgccctttccccgctc
tatttatgtaactggccagccaacgtgcgcgatttggaaaattgtctggaatatgcctcg
ctgcaccgcgaaggggatatcatcaatcagcttccctgcctgaccgaacgctgcatgcgg
cagaaattgaatttgaagatcagcaactatatgcagagcgccgccgaggaacccgccgtt
gcgccagagccggccgccgcggagtttgatgctccgctacgctgggagccctgcgcgacg
ttaccgcacgtcgtgatgccgatagccggcggatccggcggctacgatgcaagtgatgag
attcgccatcgcatcatcgccgcgctggagaaaagcggctgggttaaggctaaagccgcg
cgtttattaaatctcaccccccggcagctctcttacgcgctgcaaaagctacagatagaa
gtgaaaaagttttaa
DBGET
integrated database retrieval system
