KEGG   Brenneria izadpanahii: HC231_08260
Entry
HC231_08260       CDS       T07407                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
biz  Brenneria izadpanahii
Pathway
biz03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:biz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HC231_08260 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:biz02044]
    HC231_08260 (tssM)
Secretion system [BR:biz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HC231_08260 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical FtsK_SpoIIIE COG4_C nSTAND3
Other DBs
NCBI-ProteinID: QTF07926
LinkDB
Position
complement(1855630..1859247)
AA seq 1205 aa
MLNILVSIITNRILWGFMGATALAAVVWMIGPLLSIADIRPLESVQNRIIGILVIYLIWV
HAHVVPRIYRAWLNRRLMDNLNDAQPEQPKGARAPLNNTDQILAERFDEAAEILKKAHFN
NTSQRGAQWTQRFSNQYLYQLPWYVIIGAPGSGKTTALMNSGLQFPLADRFGKTALRGIG
GTRNCDWWFTNEAVLLDTAGRYTTQESEQTQDAGEWLRFIELLRKYRRRQPINGVIITIS
VSDLLTQSLEASQQQALNLRQRLQELHEQLGIRFPVYVLVTKADLLKGFRSYFASFDKTQ
RDQIWGFTFPWERSKQADFDFMGAFMQEFSLLQQRLDAGLPDNLLQERDTKTRAEMFLFP
QEFAALRPLLTDYLNTVFARSNFETEFSPRGIYLASGTQEGLPFDRVMGELNRALSLPAN
NTDGDNWDSVNKEAPIPAGKGQSFFIKNLLQNVIFQEAGIAGQNRWWELRSHAIIWFGYA
ALLTLLVVSGALWLISYKQNNNYLDEVQAKIPEVAQQSKMLQEHNQQDLFNLLPLLNSLI
DLPASTAFNVNDPPLTRRMGLYRGDDISNASQSLYQKSLQQLLLPAVTQHITAWLRNDNG
SDVEYSYEALKAYQMLYQPKHYDGKFLHSWVMLNLRRNLPQNVTQAQLSQLEQHLAQLLE
PQIQSSPYAKEEALISRHQALIKQNPLSTRVYGRLKRLLVHDESLRPVSLTTLAGPQSEL
AFSRKSGKPISDGVPGLYTPDGYWNSFNGQIDSVIAALRKDDIWVLGMNELQEDKQQTDS
AVRQLYMRDFIVNWDSFLADIQLNNSSDLSQRINTIRLISSNNSPLRRLVINLGKVLTVA
RTTTNEAEQDPSLQNSNTPSRTLETLFNNHDNTPIAAAGAQTPEQLVTDHYAPIIELAKP
LEKGSKTIVFDDFLKQVDDLYRYLTAVQDAANSGLNAPGNDAISNLQASAGRLPSELQGM
FSSMAVGASSDTQRRNLENIRKRISVEVGSFCRQAIAGRYPLVRSANNDVTPDDLARMFA
PGTGLMDSFFRDNLTNKVDTTQQSWRFTPGIDGKTLPGSENLLRPFQQAQSIRDAFFANG
TATPSYRVTVRTVRMDNTILNLTLDVDGQQLRYSHGPQAVQLVSWPGPGGTNQVRMQLGL
TNGTTSTLVTNGSWALNRFFDRARITPGNNLSRQATFTVDGHQVTLEFVPNSIRNPFQLP
GFVCP
NT seq 3618 nt   +upstreamnt  +downstreamnt
atgctgaatattctcgtttcaataattactaaccgtatcctctggggctttatgggcgcc
acggcgctagctgcggtagtctggatgattggcccgttgctttctattgccgatatccgt
cctctggaatccgtgcagaaccgtattatcggtatcttggtgatctatctcatttgggtt
cacgctcacgtcgtgccgcgcatctacagagcatggctcaaccgccgcctcatggataac
ctcaacgacgcacagcctgagcagccaaaaggcgcgcgcgcgccacttaataatacagat
cagatcctggccgaacgatttgatgaggcggcggagatcctgaaaaaagcgcacttcaac
aacacgtcacagcgtggcgctcagtggactcagcgcttcagcaatcagtatctctatcaa
ttaccctggtatgtgattatcggcgcgccaggatctggtaaaacaaccgcattaatgaat
tccggcttgcagttcccgctggcagaccgttttggcaaaactgcactacgcggaataggc
ggtacgcgtaactgtgactggtggttcaccaacgaagcggttttattagataccgcaggg
cgttacaccactcaggaaagtgaacaaactcaggatgccggtgaatggttacgctttatc
gaactgttgcgcaaataccgacgccgccagccgattaacggcgtcattatcacgataagc
gtttccgatctactcacccaatcgctggaagcatctcagcaacaagcgctaaacctccgt
caacgcttacaggaattacacgaacagttgggtattcgtttcccggtttacgtattggtc
accaaagcagacctactgaaaggtttccggtcttatttcgcgagttttgataaaacacag
cgtgatcaaatctggggctttactttcccgtgggaacgctcaaagcaggccgattttgat
ttcatgggcgctttcatgcaggagttttcgctgctgcaacagcgcctggatgccggcctg
ccggataatctactccaagaacgagataccaaaacacgagcagagatgttcctcttcccg
caagagttcgccgctctgcgtccattgctcacagactacctaaacaccgtatttgcgcgt
tctaattttgaaaccgaattctcaccacgcgggatctatttggcaagcggaactcaggaa
gggctaccgtttgaccgtgtgatgggcgaactcaaccgcgccctttcactaccggcaaac
aacacggatggcgacaattgggattccgtcaacaaagaagcgcccatacctgctggcaag
gggcagagcttctttattaaaaacctgctacaaaacgtcatttttcaagaggctggtatc
gcggggcaaaatcgctggtgggaattacgcagtcacgcgattatctggttcggttatgca
gcgcttctgacgctgctggtcgtgagcggcgccctgtggctaatcagttacaagcaaaac
aataactatcttgacgaagttcaagcaaaaattccggaagtcgcgcagcagagcaagatg
ctccaggaacataatcaacaggatctgttcaatttgctaccgcttctcaacagcctcatc
gatcttccagcaagtacggcgttcaacgttaacgatcctccgctaactcgacgtatggga
ttgtatcgaggcgatgacatcagcaatgcgtcacagtctctctaccaaaaatctttacag
cagttactgctgccggcggttactcaacacatcaccgcctggttgcgtaacgacaacggc
agcgacgtggaatacagttacgaagcgctcaaagcctaccaaatgctttaccagcctaaa
cattatgacggcaaatttctgcattcttgggtaatgctcaatctgcggcgcaatctgccg
caaaatgtgacccaagcgcagcttagccaattggagcagcacctagcgcaattgctggag
ccgcagattcagtcatcgccttatgctaaagaagaggcattaatcagtcgccaccaggcg
cttatcaagcagaatccgttgtcgactcgcgtatacggtcgcctgaagcgtttactggta
catgatgaaagcctacgcccagtttctttgacaacgctcgccggtccgcaaagtgaattg
gcattttcccgaaaaagcggcaaacccatcagtgacggcgtaccgggcctatatacgccc
gatggctactggaacagcttcaacggccagatcgacagcgtaatcgccgctttacgtaag
gacgacatctgggtgctgggcatgaatgagctacaggaagataagcagcaaaccgatagc
gcagtccgccagctttatatgcgggacttcatcgtcaactgggacagtttcctagccgat
attcagctcaataatagttccgacctctcgcagcgtatcaatactattcggctgatttcc
agcaataactcaccgctacgcaggttggtcatcaacctcggcaaagtgttgacggttgct
cgtacaacgacaaacgaggcggaacaggatccatccttgcaaaacagcaataccccctct
cgtactctggaaacgttgtttaacaatcacgacaatacgccgatagccgctgctggcgca
caaacgccggagcagctggtcaccgatcactatgccccgataattgaactggcaaaacca
ctggagaaaggcagcaaaactatcgtattcgacgattttctcaagcaggtcgacgatctt
taccgctaccttaccgccgtccaggacgcggcgaacagcgggctgaatgcgccaggaaat
gacgccatcagcaatttacaggccagcgcaggtcgtctgccaagcgagttgcagggaatg
ttcagcagcatggcggtcggagcaagcagcgatactcagcgccggaatcttgaaaatatc
cgtaaacgtatcagcgttgaagtaggcagcttctgtcgtcaggctattgccgggcgctac
ccgttggttcgctcagccaacaatgacgtaacgccggacgatttggcgcgcatgtttgcg
ccgggaaccggattgatggactccttttttcgcgacaacctaaccaacaaggtcgatacc
acccagcagagctggcgctttacaccaggtattgatggcaaaacgctgcccggcagtgaa
aacctattgcgcccattccagcaggcgcaatctattcgcgacgcttttttcgccaacggt
acggccacaccatcctatcgggtcaccgtgcgcacagttcgtatggataataccattctt
aatctgacgctggatgtggatggtcaacagttgcgctacagccatggcccgcaggcggtt
cagttggtaagctggcccgggccgggcggaaccaaccaggtacggatgcagttggggctc
accaatgggacgacctcaacgctggtaaccaatggctcctgggcactgaaccgtttcttc
gaccgcgcacgtatcacacctggcaacaatcttagccgtcaggccactttcacggttgac
ggacatcaggtaacgctggaatttgtaccaaacagcatccgcaaccccttccagcttccc
ggtttcgtatgcccataa

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