Brenneria izadpanahii: HC231_09330
Help
Entry
HC231_09330 CDS
T07407
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
biz
Brenneria izadpanahii
Pathway
biz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
biz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HC231_09330 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
biz03400
]
HC231_09330 (sbcB)
Enzymes [BR:
biz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
HC231_09330 (sbcB)
DNA repair and recombination proteins [BR:
biz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HC231_09330 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HC231_09330 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HC231_09330 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
DUF3528
Motif
Other DBs
NCBI-ProteinID:
QTF08095
LinkDB
All DBs
Position
complement(2080708..2082135)
Genome browser
AA seq
475 aa
AA seq
DB search
MADKTQPTFFVHDYETFGKHPARDRPAQFAGIRTDQDFNIIGDPLVIYCKPTDDYLPEPE
AVMITGITPQLAMAKGVIEAEFARQIHEAFSVPGTCIMGYNNIRFDDEVSRNIFYRNFYD
PYAYSWQNGNSRWDLLDALRACYALRPEGIVWPENDDGLPSFRLEHLTKANGVSHEHAHD
AMSDVYATIAMAKLLKQAQPKLFDYLFQLRNKNKVSALIDIPQMKPLVHVSGMFGAARGN
TSWVAPLAWHPDNRNAVIMCDLAGDITPLLELDASELRERLYTRRDRLTAGQSAVPIKLV
HINKCPVLAPASTLRPEDAERLGIDRQHCLDNLKLLRQNSQIREKVVALFAESPAFTAPD
DVDLRIYDGFFGDADRMAMKIIQETAPNNLPALDLKFVDDRLEPLLFRYRARNYPSTLDD
GEQQRWLQHRQAVFTVERLQEYITELDTLYQRYEGDKPKTELIKALFAYAQTLTS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaacacaacctacgttttttgttcatgattatgaaacctttggcaagcat
ccggcccgcgatcgtcccgcgcagtttgccgggatacgcaccgatcaggacttcaatatc
atcggcgatccgttagtcatctattgcaaaccgacggatgattatctgcccgaaccggaa
gcggtaatgataaccggcataacgccgcagttagccatggccaaaggcgtgatcgaagcg
gaattcgcccgccagattcatgaggcgttcagcgtgcccggcacctgcatcatgggttac
aacaacatccgtttcgatgacgaagtcagccggaatatcttttatcgtaatttctacgat
ccctacgcctatagctggcaaaacggcaactctcgctgggatctactggatgcgttgcgc
gcctgttatgcactgcggcccgaggggattgtctggccggaaaatgatgatggtttgccc
agcttccgacttgagcatttaaccaaggccaacggcgtatcccatgagcatgcccatgac
gccatgtccgacgtctacgccaccatcgccatggccaaattactgaaacaggctcaacct
aaactttttgattatctgttccagttgcgtaataagaacaaagtcagcgcgctgattgat
atcccgcaaatgaagccattggttcatgtttccggcatgtttggcgcagcgagaggcaac
accagttgggtggctcccctcgcctggcatccggataaccgtaacgccgtcatcatgtgc
gatctcgccggcgacataacgccgctgttggagttggatgcgtcagaattacgcgaacgt
ttatacacccgccgggatcggctaacggccggtcaaagcgccgttcccatcaaactggtt
catattaataaatgtccggtgcttgctcccgccagcacgttgcggcccgaagacgccgaa
cgattgggcatcgaccgccaacattgcctggataatttaaagctgctgcggcaaaacagt
cagatcagggaaaaagtggtggcgttgtttgccgaatcgccggcgtttaccgcgccggat
gatgtcgatctgcgcatctatgacggtttttttggcgacgccgatcgcatggcgatgaaa
atcattcaggaaaccgcccccaataatcttcccgcgctggatctgaagtttgtcgacgac
cgcctggaacctctgctcttccgctatcgggcccgcaattaccccagcacgctggatgac
ggcgaacagcaacgctggctgcagcatcggcaggcggtattcaccgtcgagcgtctgcag
gaatacatcactgagttggatacgctgtatcagcgttatgaaggcgataaaccgaaaacc
gaactgattaaagcgctgtttgcctatgcgcagaccttaaccagctaa
DBGET
integrated database retrieval system
