Brenneria izadpanahii: HC231_11240
Help
Entry
HC231_11240 CDS
T07407
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
biz
Brenneria izadpanahii
Pathway
biz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
biz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HC231_11240 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
biz03000
]
HC231_11240 (nifA)
Transcription factors [BR:
biz03000
]
Prokaryotic type
Helix-turn-helix
Other families
HC231_11240 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
GAF_2
AAA_5
AAA
Mg_chelatase
AAA_2
AAA_16
Parvo_NS1
AAA_3
Cep57_CLD_2
HTH_23
TIP49
MCM
GAF_3
AAA_7
bpMoxR
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QTF08419
LinkDB
All DBs
Position
complement(2481371..2482957)
Genome browser
AA seq
528 aa
AA seq
DB search
MSHFPTTERVTRRLDLQQQVAALHKISVALSHSLDLQQTLEAMIQVLHDHAFMQYGMVCL
FDKDRASLFIEALQGSDAQVIKGGRGVRYRMGEGILGSVMSQRSSLVLPRVSDDPRFLDR
LNLYDYALPFICVPIPGPDEMPLGVLAAQPMELHEDRLPSSTRFLEMVANLIAQTVRLVS
HAKGESEALRTERDSLRRKVQQQYGFDNIVGKSQSMRHIFDMMRQVSRWDTTVLIRGESG
TGKEMIANAIHYNSPRAGTPFVKFNCAALPDSLLESELFGHEKGAFTGAVKQRKGRFELA
DGGTLFLDEIGESSASFQAKLLRILQEGEMERVGGDETLRVDVRIIAATNRNLEEEVRAG
SFREDLYYRLNVMPIFLPPLRDRLEDVPDLAQFLLAKLSKRQGRALHISDGALRLLMNYD
WPGNVRELENCLERAAVMAEDGLIDRDVILFNYKENALMPLSRTKTNDPAAGVSSEPSIE
NIQDERQRLIAALERTGWVQAKAARLLGMTPRQVAYRIQIMNINMQRM
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtctcattttccgacgacggaacgcgtcacccgccgattagatctgcaacaacaggtt
gccgcgctgcataaaatcagcgtagcgctcagtcattcgctggatttgcaacaaacgctg
gaggcgatgatccaggtgctgcacgatcatgcgtttatgcaatacggcatggtgtgtctg
tttgataaagaccgggcgtcgctgtttattgaggcattgcagggctcggatgcccaggtt
atcaaaggcgggcggggagtgcgctatcggatgggagaaggaattttaggttcggtcatg
agtcagcgttcttcgctggttttgccccgcgtatcggacgatccgcgctttctggatcgg
ctcaatctttacgattacgccctgccttttatctgcgttcccattccggggccggatgag
atgccgttgggcgttttagccgcgcagcccatggagctgcatgaagatcgcctgccttcc
agtacccgctttctggaaatggtggccaatctgatcgcgcaaaccgtccggctggtcagc
catgccaaaggcgaaagcgaggcgcttcgcaccgaacgcgatagcctgcgcagaaaagtc
caacagcagtacggttttgacaatatcgtcgggaaaagccagtcgatgcggcatatcttc
gacatgatgcgccaagtgtcgcgctgggataccacggtgttgattcgcggcgagagcggt
acgggtaaggagatgatcgccaatgccattcactacaattcaccgcgcgccggcacgcca
tttgtgaagtttaactgcgccgcgctgccggattcactgctggaaagcgaactgttcggc
catgagaaaggggcgtttaccggcgcggtcaagcagcgcaaagggcgctttgaactggcg
gatggcggcacgctgtttttggatgaaatcggcgagagcagcgcgtcattccaggctaaa
ttgctgcgcatcctgcaggaaggggaaatggagcgggtgggcggcgacgaaacccttcgc
gtggatgtacgcattatcgccgcgaccaatcgtaacctggaggaggaagttcgcgcgggc
agctttcgtgaagacctctattaccgcctgaacgtcatgccgattttcctgccgccgcta
cgggatcggcttgaggatgtgcccgatctcgcccagtttttgttagccaaactgagtaaa
cggcaagggcgggcgctgcatatcagcgacggggcgttacggctattgatgaactatgac
tggccgggcaacgtgcgcgaattggaaaactgcctggaacgtgcagcggtaatggccgaa
gatggtttgatcgaccgcgatgtaatcctgtttaactacaaagaaaatgccttgatgccg
ctcagccgcaccaaaaccaacgatccggcggcgggcgtcagtagcgaaccgagcattgaa
aacattcaggatgaacggcagcggttaatcgccgcactggagcgcaccggctgggttcag
gccaaggcggcccgcttactggggatgacgccccgccaggtggcctaccgcattcagata
atgaatatcaatatgcagcggatgtga
DBGET
integrated database retrieval system
