Brenneria izadpanahii: HC231_12015
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Entry
HC231_12015 CDS
T07407
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
biz
Brenneria izadpanahii
Brite
KEGG Orthology (KO) [BR:
biz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
biz03016
]
HC231_12015
Enzymes [BR:
biz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
HC231_12015
Transfer RNA biogenesis [BR:
biz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HC231_12015
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
QTF08549
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All DBs
Position
2666572..2668506
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRVEGVVKGTDKGFGFLEADAQKSYFIPPPHMKKVMHGDRI
TAALHTEKDREIAEPETLIEPFLSRFVGRVQKKDDRLSIIPDHPLLKDAISCRPARNISH
TFQNGDWAVAEMRRHPLKGDRGFHAELTQYITTGDDPLAPWWVTLSRHNLEREAPEGDAA
ERNDGPLTREDLTALNFVTIDSASTEDMDDALYVQDNGDGSLQLTVAIADPTAYVEAGSE
LDNIARQRAFTNYLPGFNIPMLPRQLSDDICSLRPDERRPVLACRVTIAADGTLGDDIRF
FAAWIESKAKLAYDDVSDWLEQQGEWQPPSEAIAEQIRLLHRVCLARSEWRTTHALVFKD
RPDYRFLLGEKGEVLDIVVEPRRIANRIVEEAMIAANVCAAIVLRDKLGFGIYNVHHGFD
PASVEQAVAVLDSFGIQADPQALLTLDGFCSLRRNLDAQPTQFLDSRIRRFQSFAEVSTT
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAVIAGQPAEKPQDEVTVQLAERRRLNRM
AERDVGDWLYARFLKDKAGTDTRFPAEIMDVTRGGLRVRLQDNGAVAFIPSSFIHAVRDE
LVCSQDTGSVSIKGQEVYRQGDALDVVITEVRLETRSIIAKPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataatccgctgcttgcacagctaaaacagcaacttcactctcagacgcca
cgggttgaaggtgtcgtcaagggcacagataaagggtttggctttcttgaagctgacgcg
caaaaaagctatttcatcccgccgccgcatatgaaaaaagtgatgcacggcgaccgtatc
actgccgcgctgcacactgaaaaagaccgagaaatcgccgagccggaaacgctgattgag
cctttcctgagccgctttgtcggccgcgttcagaaaaaagacgatcgtttatccataatt
cccgaccatccgttattaaaagacgctatctcctgccgtcccgcccgtaacatcagccat
acatttcagaatggcgattgggcggtggctgaaatgcgccgtcatccgctcaaaggcgac
cgcggttttcacgccgaactgacgcaatacattactaccggcgacgatccgctggcgccg
tggtgggtgacgttgtcacggcataacctggagcgcgaggctcccgaaggcgacgccgcc
gaacgcaatgatggtccgctgacgcgcgaagacctgaccgcgctgaatttcgttaccata
gacagcgccagcaccgaagacatggatgatgcgctctatgtacaggacaacggagatggt
tcgctgcagttgaccgtcgctatcgccgatcccaccgcctacgtcgaggccggcagcgaa
ctggacaacattgcccgccagcgcgccttcaccaattatctgcccggtttcaatattccg
atgttgccgcgtcagttgtcggacgatatctgctcgctgcgccccgatgaacgccgcccg
gttcttgcctgccgcgtgactatcgccgccgacggcacgctgggtgatgatatccgcttc
ttcgccgcctggatcgaatccaaagccaaactggcctatgacgacgtatccgattggctg
gagcagcaaggcgaatggcagccgccgagcgaggccattgccgaacaaatccggttgctg
caccgcgtctgtctggcccgcagcgaatggcgcaccacccatgcgctggtgttcaaagat
cgtccggactaccgcttcctgctgggagaaaaaggcgaagtgctggatatcgtcgttgaa
cccagacgcatcgccaaccggatcgtcgaagaggcgatgatcgccgccaacgtctgcgcc
gccattgtgctgcgcgataagctgggctttggcatctacaacgtccatcacggctttgat
ccggcatccgtcgagcaggcggttgcggtattggattcgttcggtatacaggccgaccct
caggcgctactgacgcttgacggcttttgttccctgcgccgtaatttggacgcccaacct
acccagttcctggatagccggatacgccgcttccagtcattcgccgaagtcagcaccacg
ccgggaccgcatttcggcctgggtctggaagcctacgccacctggacctcgccgatccgt
aaatacggcgatatgatcaaccaccggttgctgaaagcggtgatcgccggacagccggcg
gagaagccgcaggatgaagttaccgtgcagttggcggagcgccgccgtcttaaccggatg
gcggaacgggatgtcggcgactggctatacgcccgtttccttaaggataaagcgggaacc
gatacgcgcttcccggcggaaattatggatgttacccgcggcggcctgcgcgtgcgcttg
caggataacggcgcggtggcgtttataccttcgtcctttatccacgcggtgcgcgacgaa
ttggtgtgcagccaagataccggcagcgtatcgataaaaggccaggaagtttatcgtcag
ggcgatgcccttgacgtcgttattaccgaggttcgcctcgaaacccgcagcatcatcgcc
aaacctgccgcatag
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