Brenneria izadpanahii: HC231_14290
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Entry
HC231_14290 CDS
T07407
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
biz
Brenneria izadpanahii
Pathway
biz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
biz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HC231_14290 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
biz03400
]
HC231_14290 (uvrB)
DNA repair and recombination proteins [BR:
biz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HC231_14290 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HC231_14290 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
SBDS_domain_II
AAA_30
UB2H
DUF87
AAA_22
DUF4686
Motif
Other DBs
NCBI-ProteinID:
QTF08947
LinkDB
All DBs
Position
complement(3179802..3181811)
Genome browser
AA seq
669 aa
AA seq
DB search
MSKVFKLNSEFKPAGDQPEAIRRLKEGLEDGLAHQTLLGVTGSGKTFTIANVIADLNRPT
MVLAPNKTLAAQLYGEMKAFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTKGMLIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDEVALRVELFDEEVERLSLFDPLTGQILQTVPR
YTIYPKTHYVTPRERILQAMEDIKVELAERRKILLANDKLVEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGEVIDQVVRPTGLLD
PVLEVRPVATQVDDLLSEIRLRAAVNERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYGDRITPSMERAISETERRREKQQAYNHEHGIVPQGLNKKIADILQLG
QPNHKGKGRGKKAAEPAAGYQLMTPKALEQKIRELESKMMTHAQNLEFEEAAELRDQVQA
LRAQFIAAS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagtattcaaactgaattccgaatttaaaccagcgggcgatcagccggaagcc
attcgccgtttaaaggaagggttagaggatggattggcgcatcagacgctgttgggcgta
accggatcgggtaaaacctttaccatcgccaacgtgatcgccgatctgaaccgtcccacc
atggtgctggcccccaataaaacgctggccgcccagctttacggggaaatgaaggcgttt
ttcccggataacgcggtggaatatttcgtctcttattacgactactatcagccggaagcc
tatgtgccgagttccgataccttcattgagaaggatgcgtcggtcaacgaacatattgag
cagatgcggctctcggcgaccaaagccatgctggagcggcgcgacgtggtggtggtcgcc
tcggtttccgccatttatggtttgggcgatcccgatctgtatctgaaaatgatgctgcat
ctgacgaaggggatgcttatcgaccagcgcgcgattttgcggcgtctggcggagctgcaa
tatacccgtaacgatcaggcgtttcagcgcggaaccttccgcgttcggggcgaagtgatt
gatattttccctgccgagtccgacgaggtggcgctgcgcgtcgagctgtttgatgaggag
gtggaacgcctgtcgctgttcgacccgttgaccgggcagattctgcaaaccgtgccgcgc
tataccatctatccgaaaacgcactatgtgacgccgcgcgagcgtatcttgcaggcgatg
gaggatatcaaggttgaactggccgaacgccgcaaaatactgctggcgaacgataagctg
gtggaagagcagcggctgagccagcgaacgcagtttgacctggaaatgatgaacgagctt
ggttattgctcggggatcgaaaactactcgcgctatctctccgggcgcgggcccggagag
ccgccgccgaccctgtttgactatctgccggccgatgggctgctggtggtcgacgaatcg
cacgtcaccatcccgcagattggcggtatgtaccgcggcgaccgggcgcgcaaagaaacg
ctggtggagtacggcttccgcctgccgtcggcgttggataaccggccgctgaagttcgag
gagtttgaggcgctggcgccgcagaccatttatgtatcggcgacgccgggcaactatgag
ttggaaaaatccggcggcgaagtgatcgatcaggtggtgcggcccaccggcctgctcgat
ccggtgctggaggtcaggccggtcgccacccaggtggacgatttgctgtcggagatccgg
ttgcgcgccgccgtgaacgagcgggtgctggtcaccacgctgaccaaacgaatggcggaa
gatttgacggaatatctggaagagcacggcgagcgggtgcgttatctgcactctgatatc
gatacggtggagcgcgtcgagattatccgcgatctgcggcttggcgagtttgacgtgctg
gtgggcatcaacctgttgcgggaagggctggatatgccggaagtgtcgctggtggcgatt
ctggatgccgataaagaaggtttcctgcgttccgagcgctcgctgattcagaccatcggt
cgtgcggcgcgaaacctgaacggtaaagccattctgtatggcgacagaattacgccgtcc
atggaacgggcgattagcgaaacggaacgccggcgtgagaaacagcaggcttacaaccat
gaacacggcatcgtaccgcaggggttgaataagaaaatcgccgatattctgcaattgggc
cagccgaaccataaaggcaaagggcgaggtaaaaaagccgccgagccggctgcgggctat
cagttaatgacgccgaaagcgctggaacagaagattcgcgagctggaaagcaagatgatg
acgcatgcgcagaatctggaatttgaagaggctgccgaactgcgcgatcaggttcaggct
ttgcgagcacagtttatcgccgcgtcctga
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