Brenneria izadpanahii: HC231_15955
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Entry
HC231_15955 CDS
T07407
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
biz
Brenneria izadpanahii
Pathway
biz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
biz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HC231_15955
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
biz02000
]
HC231_15955
Transporters [BR:
biz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HC231_15955
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
QTF09228
UniProt:
A0ABX7V010
LinkDB
All DBs
Position
complement(3578411..3579541)
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AA seq
376 aa
AA seq
DB search
MSDKKEHMLSSQIPMSESIDVARRRLIKQSSILGAGVALSAFSSPLVFAKGSKEVIVRGL
GGAYQEAMDIAIYKPFTEATGINVKIIPATGSQVLAMVKAGRVSIDVLDLGDIIQFNLDK
AGALEPINYSAMKYSDPNDIMPELRHPNMVGNLLYASVMVYNTDVFSADSHPKNWTEFWN
AERFPGPRTLADMRSGVVELEFPLLADGVDMAHIYPIDIQRAFRSMDKIKPYISKWWDTG
AISAQLLERKDAVLGAVWNGRAQTLIDQGAPLAIEWNQAKQQVQYWSVVKGAPNPENAQL
LIDFALQPEVQAKLTQYIAYGPTNKKAFDFVRPEDLAKLSSNPAYFANTFVQDAQWWADN
LDQVGKVWQSWILGQA
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaaaaggaacatatgctttcttctcaaattcctatgagtgaaagtattgat
gttgcgcgtcgtcggttaataaaacaaagctctattcttggtgccggagttgcgcttagt
gctttttcttcgcctttagtctttgctaaagggagtaaggaagtcattgttcggggatta
ggcggggcttatcaggaggcgatggatatcgctatctataagccttttaccgaggcaacg
ggtattaatgtgaaaatcatcccggccacaggttcacaagtgttggctatggtgaaagcg
ggtcgggtcagtattgatgttctggatttaggcgatattattcaatttaatttggataaa
gccggtgcacttgaacccattaattattcggcaatgaaatacagcgatccgaatgatatt
atgccagagcttcgccatcccaatatggtcgggaatttgttatatgcgtccgtgatggtc
tataacacggatgtctttagcgcggattcgcatccaaaaaattggaccgagttttggaac
gctgaacgcttccctggtcccagaacgttagcggatatgcgttctggcgtagtcgaactg
gaatttccactgttggctgatggcgtcgatatggcgcatatttaccctatcgatattcaa
cgagcctttcgctccatggataaaattaagccttatatttcaaaatggtgggataccgga
gcgatttcagcacagctgctggaacgtaaagatgcggtacttggcgcagtatggaatggc
agggcgcagacattgatcgatcagggcgcaccactggctattgagtggaatcaggcaaaa
caacaggtacagtactggagcgtggttaaaggcgcgcctaacccggaaaatgctcaattg
cttatcgattttgccctgcagccagaggttcaggccaaacttactcaatatatcgcctat
gggccgaccaataaaaaggcctttgattttgttcggccggaagatctggcgaaactgtct
tctaacccagcgtatttcgcaaacacttttgtacaggatgcacagtggtgggctgataat
ttggatcaggtgggtaaagtttggcagtcctggattttaggtcaggcttaa
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