Brenneria izadpanahii: HC231_17305
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Entry
HC231_17305 CDS
T07407
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
biz
Brenneria izadpanahii
Pathway
biz03030
DNA replication
biz03430
Mismatch repair
biz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
biz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HC231_17305 (dnaX)
03430 Mismatch repair
HC231_17305 (dnaX)
03440 Homologous recombination
HC231_17305 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
biz03032
]
HC231_17305 (dnaX)
03400 DNA repair and recombination proteins [BR:
biz03400
]
HC231_17305 (dnaX)
Enzymes [BR:
biz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HC231_17305 (dnaX)
DNA replication proteins [BR:
biz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HC231_17305 (dnaX)
DNA repair and recombination proteins [BR:
biz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HC231_17305 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_tau_4
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_18
AAA_14
ResIII
AAA_30
AAA_2
TsaE
AAA_assoc_2
nSTAND3
AAA_24
AAA_7
Mg_chelatase
PIF1
SKI
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QTF09472
LinkDB
All DBs
Position
complement(3876476..3878539)
Genome browser
AA seq
687 aa
AA seq
DB search
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTTIARLLAK
GLNCEQGVTATPCGQCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
EQIRAHLEKVLQAEHLASEPRALQLLARAADGSLRDALSLADQAIAMGQGQVTTESVSQM
LGTLDDEQPLAIIEALVKADGARVMALLDQAAARGIDWESLLVETLTLLHRIAMVQLLPT
ALSNDYAAVESRLRDLARLLPPADVQLYYQTLLIGRKELAYAPDRRMGVEMTLLRALAFH
PKQIIEAPVSHASSQPPAPSHAAPQSAPASSAQPSRPVPPPRQSSTGGHGHIPPYPTEPP
ASFDESDGFEPPGPEQSAEPPQADGGLSDTTSQLLQARSQLLRKQGATPPKKAEPAASNK
ARPGNSALERLASVTERGLQRKNEKDSVSAAAKKKPEAYRWRAQNVVEDVKADVATPKAL
RSALEHEKTPELAARLAEESLERDEWAAEINRLSLPKLVQQLALNAFKECPQAGKIHLHL
RSSQRHLNSPAAQKTLTEALAAHYGQPIELLVTEDDNPAVLTPLEWRQAIYEEKLAQARQ
SIMSDNTIQTLRRFFDAELDEESIRPV
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggttcttgcccgtaagtggcgtccccaaacctttgctgatgtggttggt
caggaacatgtactgaccgcattagccaatggcctttctctaggcagaatccatcacgcc
tatttgttttccggtacgcgcggcgtagggaaaaccaccatcgcccgtttgctggcaaaa
ggcctcaactgtgaacagggcgtgacggcaacgccctgcggacagtgcgataactgccgt
gaaattgagcaaggccgttttgttgatttgattgaaattgatgcggcttcccgtaccaaa
gttgaggatacgcgcgacctgctggataacgttcagtacgccccggcgcgcgggcgtttc
aaagtgtacctgatcgatgaagtgcacatgttgtcgcgtcacagctttaatgcgctgctg
aaaacgctggaagagccgccgccgcacgtaaaattcctgctggcgaccaccgatccgcaa
aagctgccggtgacgattctgtcgcgctgtctgcaattccatcttaaggcgctggatgtc
gagcagatccgggcgcacttagagaaggtgttgcaggcggagcatctggcgagcgagcct
cgggcgctgcaactgctggcccgcgccgccgacggcagcctgcgcgatgccttgagcctc
gccgaccaggccatcgccatggggcagggacaggtgacgacggaatcggtcagccagatg
ttgggaacgctggatgacgaacaaccgctggcgatcatcgaagcgttggtgaaagccgac
ggcgcgcgcgttatggccttgctcgatcaagctgcggcgcgcggcattgactgggagtcg
ctgctggttgaaaccctgacgttgttgcaccgcatcgcgatggttcagctattgcccacg
gcgctaagtaatgactatgcggcggtagagtcccgtttacgggatctggcgcggctctta
ccgcctgcggatgtgcagctttattaccagacgctgctgataggccgtaaagagctggct
tatgcgccggatcgccggatgggggtagagatgacgttattgcgcgcgctggctttccat
cctaagcagattattgaagcgccggtgtcgcacgcatccagccagcctccggcgccttcg
catgcggcgccgcagtctgcgccggcgtcttcggctcagccgtcaagaccggttccgccg
ccgcggcaatccagtaccggcgggcatggacatattcccccttatccgactgagccgccg
gcgtcattcgacgaatccgacggttttgaaccaccggggccggaacagagcgcggagccg
ccgcaggcggatggcggactttcggatactacgtcgcagcttttacaagcgcgtagtcag
ctattgcgaaagcagggggcaaccccgccaaaaaaagctgaaccggcagcgtcgaataaa
gcgcggccgggaaactcagcgcttgaacggttagcctcggtgactgagcgcggtttacag
cggaaaaacgagaaagacagcgtttccgcggcggccaaaaagaaaccggaagcctatcgc
tggcgggcgcagaacgtcgtggaggatgtcaaagccgacgtcgccacgccaaaggcgctg
cgttcggcgttagagcatgaaaaaacgcccgaactggcggcccggttggcggaagagtcg
ctggagcgcgatgagtgggcggcggaaattaatcgcctgtcgttaccaaaactggtacaa
caactggcgttaaatgcattcaaggaatgcccgcaagccggtaaaatacacctgcatctg
cgttcttcccagcgccacctcaattcaccggcggcgcagaaaaccctgacagaagcttta
gcggcgcattacggccagcctatcgaactgttggtgacggaagacgataatccggcagta
ctgaccccgctggagtggcgtcaggctatttatgaagaaaagctggcgcaggcgcgccag
tcgattatgtccgataatactattcaaacgctgcggcgtttctttgatgcggaactggac
gaagaaagtatccgccctgtttaa
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