Brenneria izadpanahii: HC231_17645
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Entry
HC231_17645 CDS
T07407
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
biz
Brenneria izadpanahii
Brite
KEGG Orthology (KO) [BR:
biz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
biz03400
]
HC231_17645 (sbcD)
DNA repair and recombination proteins [BR:
biz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HC231_17645 (sbcD)
Archaeal homologous recombinant proteins
HC231_17645 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QTF09535
LinkDB
All DBs
Position
3947990..3949216
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AA seq
408 aa
AA seq
DB search
MRIIHTADWHLGQYFYTKSRAAEHQAFLHWLIAQVEQHQVDAVIVAGDIFDNGSPPSYAR
EMYYRFVVDLQRKGCQLVILAGNHDSVATLNESRELLARLNTQVVASTDGDIEKQTLVLK
NRQGQPGAVLCAIPFLRPRDLIVSQAGQSGDEKQQALQDAITEHYRQCYQLACQTRERLG
LPLPIIATGHLTTIGVTASESVRDIYIGTLDAFPAQAFPPADYIALGHIHRPQRVTKSEH
IRYSGSPIPLSFDELGSEKSVCLVSFEPDTPPAIETLAIPMTQPMRLIKGNLADIERQLS
AFNDYQGEKTVWLDIEISTQDYLNDMQKRIQALTEDLPVEVLLLRRAREQHMQAIVRQEK
ETLNELTVHDVFERRLAAAGDLEENRRQRVRALFDQVIEELEQDKRAE
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattattcacaccgccgactggcatctagggcaatatttctataccaagagccgc
gcggccgaacatcaagcgtttctgcactggctcattgctcaggtcgaacaacatcaggtg
gatgcagtaatagtagcaggcgatatctttgataacggttctccgccaagttatgcgcgg
gaaatgtattaccgttttgttgtcgatttacagcgtaaaggctgtcagttagtcatatta
gcgggcaaccatgattccgtcgccaccctgaatgaatcacgggaattgctggcccgtctg
aacacgcaggtcgttgccagcactgacggcgatatcgaaaaacagacgcttgtgctgaaa
aaccgccaggggcagcccggcgccgtgctttgcgcgatcccctttctacgtccgcgcgat
ctgatcgtcagccaggccgggcaatccggcgacgaaaaacaacaggcattgcaggacgcc
atcaccgagcattaccggcagtgctaccagttggcctgccagacgcgcgaaagattgggg
ctgccgttgcccatcatcgccaccggccacctgacgaccatcggcgtcaccgcctccgag
tcggtgcgcgatatctacatcggtacgctggatgccttcccggcccaggcgtttccgccg
gcggactatattgccctcggacatattcaccgtccgcaacgcgtgacgaaaagcgaacat
attcgttacagcggttcccctattccgctcagttttgatgaactgggcagtgaaaaatcc
gtttgtctggtcagcttcgaaccagataccccgccagcgatagagacgcttgcgatcccg
atgacgcagccaatgcggctcatcaaaggcaatctggccgacattgagcgccaactctcc
gccttcaatgattatcagggcgaaaaaacggtgtggctggatatcgaaatcagcacccag
gattatctgaacgatatgcaaaagcgcattcaggcgctgaccgaggatttacccgttgaa
gtgctgctgctacgccgcgcccgcgaacagcacatgcaggcgattgtgcggcaggaaaag
gaaacgctgaatgaactgacggtacatgacgtttttgaacggcggctggcggcggccggc
gacctggaggaaaatcgtcggcagcgcgtgcgcgcgttgttcgatcaggttattgaagaa
ttggaacaggataagcgcgccgaatga
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