Brenneria izadpanahii: HC231_18040
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Entry
HC231_18040 CDS
T07407
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
biz
Brenneria izadpanahii
Pathway
biz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
biz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HC231_18040 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
biz03400
]
HC231_18040 (recD)
Enzymes [BR:
biz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HC231_18040 (recD)
DNA repair and recombination proteins [BR:
biz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HC231_18040 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
Viral_helicase1
Helicase_RecD
AAA_11
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
PhoH
nSTAND3
AAA_16
MukB
Herpes_Helicase
DEAD
AAA_28
CbiA
TrwB_AAD_bind
T2SSE
UvrD_C
SRP54
ATPase
Sulfotransfer_4
AAA
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QTF09606
LinkDB
All DBs
Position
complement(4045897..4047762)
Genome browser
AA seq
621 aa
AA seq
DB search
MIELLETALQRRLLRPLDIQFARMLADDDNPQLLLAAACLSAQSGAGHVCLPLEVLQPSL
LFDDRDRELAQSVWEAAGKLDASGWRRCLLASPAVGDGNSPTPLVLRQQNLYLQRSWQSE
GQVARFIAGEDHDPRIDEQPIRTVLDSLFPPVDGEIDWQKVAAAVALTRRITVISGGPGT
GKTTTVAKLLAALIQLNSGTPLRIQLAAPTGKAAARLTESLGAALSNLSLSQAHRERFPQ
EATTLHRLLGAVPDSQRLRHHQGNPLHLDVLVVDEASMVDLPMMANLIAALPEQAKVIFL
GDRDQLASVEAGAVLGDICRFAQAGYSRARAQQLQRLTGCRLDDDGAENRATVGDSICLL
RKSYRFDRHSGIGQLALAVNNGDDRRVLAVLNASFTDISCRPLAAAEDYQQMLAQCVAGY
RDYLRLIAADADPETVLTAFQRYRQLCALREGPFGVAGLNQRIEQALDKSGLIHRSRNPL
NRWYVGRPVMIERNDAVLGLFNGDIGIAMLSEKGELRVYFQLPNGKTKAVAPSRLPPHDT
AYAMTVHKSQGSEFEHTALILPNHYLPVLTRELVYTAITRARQRLSLYADTKILCRAVKT
PTQRHSGLVERIMALSSDEHR
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgattgagttactcgaaacggcattacagcgccggcttctgcgcccgctggatattcag
ttcgccaggatgctggcggatgacgacaaccctcaattgctgctggccgcggcctgtcta
agcgcgcagtccggcgccggacatgtttgcctgccgttggaagttttacagccctcgctg
ttgtttgacgatcgcgatcgtgaattggctcagtcggtatgggaagccgccggaaaattg
gacgcatccgggtggcggcgatgcctgttggcatcccccgccgtgggcgacggcaatagc
ccgacgccgctggtgttgcggcaacaaaatctctatttgcagcgcagctggcagagcgaa
ggacaggtcgcgcggtttatcgccggtgaggatcacgatccccggatcgatgagcaacct
atccgcacggtgttagatagcctgtttccaccggtcgacggtgaaatcgactggcaaaaa
gtcgcggcggccgtcgccctgacccggcgtatcaccgtgatttccggcgggccgggcacc
ggtaagacaaccacggtcgccaaactgctggccgcgttgattcagcttaattcgggaacg
ccgttgcgtattcaactggccgcgccgacggggaaagccgccgcgcgtttaacggagtcg
ctgggcgcggcgttgagcaacctatcgctgagtcaggctcaccgggagcgctttccccag
gaagcgaccacgctccaccgtttgttaggggcggtgcccgacagtcaacgattgcgtcac
catcaggggaatccgctgcaccttgatgtactggtggtggatgaagcctcaatggtcgat
ctgccgatgatggcgaatctgatcgccgcgctgcctgagcaggcgaaggtcatctttctg
ggcgatcgcgatcagctggcgtcggtggaggcgggagcggtgctgggagatatctgccgc
tttgcgcaggcgggctacagccgggcaagggcgcagcagctacagcggctgaccggctgc
cggcttgacgatgacggggctgaaaaccgggcaaccgtcggggatagcatctgtctgttg
cgtaaaagctatcgtttcgatcggcattccggcatcgggcaattggctttggcggtgaac
aacggcgatgaccggcgagtgcttgccgttttgaacgctagctttacggatatctcctgc
cgtccgctggccgcagcggaagattaccagcagatgctggcgcaatgcgttgcaggctac
cgggattatttacggcttattgccgccgatgccgatccggaaacggttctgacggccttc
caacgctatcgtcaactgtgcgctctgcgcgaggggccattcggcgtggcggggcttaac
cagcggattgaacaggcattagataaaagcggactgatccatcgcagccgtaatccgctt
aatcgctggtacgttggtcgcccggtgatgatcgagcgtaatgatgcggtgctgggatta
tttaatggcgatatcggtatcgccatgctgagtgaaaagggagaactgcgggtttacttt
caactccccaacggcaaaaccaaggccgtagcgccgagccgtttgccgccgcacgatacg
gcctatgccatgacggtgcataagtcgcagggatcggaattcgaacataccgcgctgata
ttgccgaaccattatctgccggtattaacgcgggaattggtctataccgccatcacccgc
gcccgtcagcgtttgtcgctgtatgcggataccaaaattttgtgtcgagcggtgaaaacc
cccacccagcgtcatagcggtttggttgaacgcatcatggcgctttcatcagacgagcat
cgctaa
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