Brenneria izadpanahii: HC231_18055
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Entry
HC231_18055 CDS
T07407
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
biz
Brenneria izadpanahii
Pathway
biz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
biz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HC231_18055 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
biz03400
]
HC231_18055 (recC)
Enzymes [BR:
biz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HC231_18055 (recC)
DNA repair and recombination proteins [BR:
biz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HC231_18055 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
TTc_toxin_rep
Peptidase_M16_C
Motif
Other DBs
NCBI-ProteinID:
QTF09609
UniProt:
A0ABX7UVH8
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All DBs
Position
complement(4054360..4057749)
Genome browser
AA seq
1129 aa
AA seq
DB search
MFTVYHSNQLDILKRLMVELIKRQPLADPFQPEVVLVQSPGMAQWLQIELAEHFGIAANI
DFPLPGVFLWEMCRHVLPDIPKESAFSKDSMTWKLMHLLPEQLEQPDFASLHHYLQDDGD
RRKLHQLAGRIADLFDQYLIYRPKWIEQWQQGQQVDGLGASQPWQSASWRALLNYTRELG
QPEWHHANLYQRFIKKLEQAESCPPGLPPRVFICGISALPPVYLQALRALAKHIDVHLLF
TNPCRDYWSDIQDYKFLAKLKSRNRRLHCWDNAQAADYRPLFRDPQQADSLFNAEGQQQV
NNPLLASWGKLGRDHLYLLAELDDVQEVDAFVDVDGSNLLQRIQRDILELEDHSVVALSK
SSLDTSRQKRPLAPDDRSVDLHACHSPQREVEVLHDQLLAMMADDKNLTPRDIIVMVADI
DSYTPFIQAVFGNAAEDRYLPFAISDQRARHAHPALQAVISLLDLPNSRFTAEQVLALLE
VPALAARFGIQEEGLRRLRLWVVESGIRWGLDDDNVRELMLPATGQHTWRFGLTRMLLGY
AMDSHAGDWRGVLPYDESSGLIAELAGQLAELLMQLSQWRHRLQQSRTLTEWLPLCRQLI
DTFFDADSDTEAALALIEKQWQLVISTGTASCYPQLVPVSLLRDELSRRIDQERLSQRFL
AGSINFCTLMPMRSIPFEVVCLLGMNDGVYPRTLPPLGFDLMGRKIQRGDRSRRDDDRYL
FLEALLSAQRKLYISYIGRSIQDNTRRYPSVLVSELIEYIAQSHYLPEDRDSDVDASSER
VARHLCHEHSRMPFDEKNFLPPLPQSFAAEWLAAANRRGQPQPDFDRELPLECYTEISLD
DLKRFYRHPVRAFFQLRLGVSFMLQDDELLDEEPFIVDNLSRYQLNTELLNTLIEQGEPE
RLYRRVRAAGGLPYGAFGELYWQTQQQEMSALAERIREELAPGKAESLEADIQLDGIRVS
GWLSRVQQDGLLRWRPGKLSMTDGITLWLEHLVYCLTGGQGESRMFGRDNTAWRFAAMPA
EQAREYLQLMLAGYQRGMNKPLLLLNKSGSAWLAQCYDRESDSIQWDEETQRKACAKLLQ
AWQGNMGMPGEGEDYYLQRIVRELDERRMEEIIEAAQTWLLPPIRSNLV
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgtttacggtttatcattcaaatcagctggatattttaaaacggctgatggtcgagctg
attaaacgtcagccgttagcggatccctttcagccggaagtcgttctggtgcaaagccct
ggtatggcgcagtggctgcaaattgaactggccgagcatttcggtattgccgccaacatt
gattttccgctgcccggcgtttttctgtgggagatgtgccgtcatgttttgcctgatatc
cccaaagaaagcgcgttcagcaaagattccatgacctggaaattgatgcatctgctgcct
gaacaattggagcagcccgattttgcttcgttgcatcactatctacaggatgacggcgat
cggcgtaagctgcaccagctcgccgggcgtattgccgatctcttcgatcaatatctgatc
tatcgtccaaagtggatcgaacagtggcaacagggtcaacaggttgacggtttgggcgct
agccaaccgtggcagtcggcatcctggcgcgcgctattgaactatacccgcgagctgggg
cagccggagtggcatcatgctaacttgtaccagcgctttatcaaaaagctggaacaggcg
gagagctgtccgccgggattaccgccgcgcgtatttatctgcggtatttccgccttaccg
ccggtgtatttgcaggctttgcgcgcgctggccaagcatattgacgttcatctgctgttt
accaacccctgccgcgattactggagcgatattcaggattataagtttttggccaagctg
aaatcccgcaaccgccggctgcattgctgggataacgcgcaagcggcggattatcgtccg
ctattccgcgatccgcagcaggctgattcgctgtttaatgcggaaggccagcagcaggtg
aataacccgctgttagcgtcctgggggaagttaggccgcgatcatctttatctgcttgcc
gagcttgatgatgtgcaggaggtggatgcgtttgttgatgtggacggcagcaacctgctg
caaaggatacagcgcgatatcttggagctggaggatcacagcgtcgtggcgctcagtaaa
tcctccttggacaccagccgtcagaaacgtccgctggcgccggacgatcgatccgtcgat
ttgcacgcctgccacagcccgcagcgcgaagtggaagtgctgcacgaccaattactggcc
atgatggccgacgacaaaaatctcaccccccgcgatattatcgtcatggtggcggatatc
gacagctatacgccttttattcaggcggtgttcggcaatgcggcggaagatcgctatctg
cctttcgccatttccgaccagcgggcgcggcatgcccaccccgcattacaggcggtgatt
agcctgcttgatttacccaatagccggtttaccgccgaacaggtgctggctctgctggaa
gtgccggcgctggccgcgcgtttcggcattcaggaggaggggctgaggcggttgcgcctg
tgggtggtggagtccggtatccgttggggactggatgatgacaatgtacgtgaactgatg
ctgccggcaaccggacagcatacctggcgtttcggcttgacgagaatgctgctgggctac
gccatggatagccatgccggtgattggcggggcgtgctgccttatgatgagtccagcggt
ctgatcgccgagcttgccggccaattggctgagttgctgatgcagcttagccaatggcgt
catcgtttgcagcaatcacgcacgctgaccgaatggctgcctttatgccgtcaattgatt
gataccttctttgatgcagacagcgataccgaagcggcgttggcgctgatcgaaaagcag
tggcagcttgttatcagcacaggaacggcctcctgttatccgcagcttgtacccgtttcg
ctgttgcgggatgaactttcccgccggatcgatcaggaacggctcagccagcgttttctg
gccggctccatcaatttttgcaccttgatgccgatgcgctccattccgttcgaagtcgta
tgtctgctgggaatgaacgacggcgtctatccgcggactttgccgccgctggggtttgat
ctgatggggcggaaaattcaacgcggcgatcgcagccggcgtgacgacgaccgctacctg
tttctggaagcgttgctttcggcgcagcgtaagctctatatcagctatatcggccgctcg
atacaggataacacccgccgttatccttccgtactggttagcgaactgattgagtacatt
gcgcaaagtcattatctgccggaagatcgggatagcgatgttgatgccagttcggaacgc
gtcgcgcggcatttgtgccatgagcatagccgtatgccgtttgatgagaaaaattttcta
ccgccgctgccgcagagctttgcggctgagtggctggcggcggcaaaccggcgggggcaa
cctcagcctgatttcgatcgcgaattgccattggaatgttataccgaaatcagcctggac
gatctgaaacgattttatcgtcatccggttcgggctttcttccagcttcggctcggcgtg
agcttcatgctgcaagatgatgaattgcttgatgaagagccgtttatcgtggataacttg
agccgctatcaactcaataccgagcttctcaacaccctgatagagcagggcgagccggaa
cgattataccggcgcgtgcgggcggcgggcgggttgccgtacggcgcgtttggtgaacta
tactggcagactcagcagcaggaaatgtcggcgctggcggagcgtatacgcgaagagctg
gcgccgggcaaggcggaaagcctggaggcggatatccagcttgacgggattcgcgtcagc
ggttggctgtctcgggtgcagcaggatggtttgctgcgctggcggccgggaaaactgtcg
atgacggacggcatcacgctctggctggagcatctggtctattgcttgaccggcgggcag
ggggagagccgaatgttcggacgcgataacaccgcctggcgttttgccgcaatgcccgcc
gaacaggcgcgggaatatctgcaattgatgctggcgggctaccagcgcgggatgaacaaa
ccgttgctgctgctgaataagtcgggcagcgcctggttggctcaatgctatgaccgtgaa
agcgatagcattcaatgggatgaggagacgcaaaggaaggcttgcgccaaactgctgcag
gcctggcaaggcaatatgggcatgccgggcgagggcgaggattattatttgcagcggatc
gtgcgtgaattggatgaaaggcgaatggaagaaattattgaagcggcgcaaacctggtta
ctgccgccaatccgttctaatctggtttga
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