Brenneria izadpanahii: HC231_19595
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Entry
HC231_19595 CDS
T07407
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
biz
Brenneria izadpanahii
Pathway
biz00040
Pentose and glucuronate interconversions
biz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
biz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HC231_19595
Enzymes [BR:
biz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
HC231_19595
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Aq_1974-like
Motif
Other DBs
NCBI-ProteinID:
QTF09880
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Position
complement(4390781..4392100)
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AA seq
439 aa
AA seq
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MKKVERATLGGDGTENTSVPREWRDEATGRKIIRLSELAGTSSLYFHQNAFSRDGQLMVV
TTPAGIAVIDMRTRRNTLILPRPAAEILMVGRRTSRLWYIDEIDGQRVVCSLHLLTGEMA
RHYRLTPSETVCALNADETLLLGSETAQNKAFNDVFASAVSDAAGGNANPQGEWMVASEM
YHPHTGRPLTFAEQKEVHINQRLEQRLPMTLFVIDVASGMRRDVHHATDWLNHLQFSPAD
PNQILFCHEGPWHKVDRIWTIRTDGSALTKIHTRAMNMEIAGHEFFSADGNTIWYDLQTP
RGEVFWLAGYELHSGRRQWYALDRDSWSVHFNISYDGKYFAGDGGDEEMVAHAKNGKWIS
LFVPEAIPDVAGISAANADSLIAPGVLRRQRLVDMSAHDYRLEPNLAFTPDGNYLVFRSN
MHGEVHTYAVALNEANCRR
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtagagcgagcgacgttgggcggagacggaacggaaaacacctccgtcccg
cgcgaatggcgcgatgaggcgaccggaagaaaaattattcggctgtcggaactggctggg
acgtcgtcactgtatttccatcaaaatgcgtttagccgcgatggtcaattaatggtggtg
acgacgccggcggggatcgccgtcattgatatgcgaacgcggcgcaatacgctgattttg
cctcgcccggcggcggagattttgatggtgggcagacggacttcccggttgtggtatatc
gatgagattgacggccagcgggtggtctgttccctgcacctgctgaccggtgagatggcg
cggcactaccggttgacgccttcagaaacggtgtgcgccctgaatgctgatgaaacgctg
ctgctgggaagcgaaaccgcgcaaaacaaggcgttcaatgatgtgttcgcctccgccgtg
tccgacgcggccggcggtaacgccaatccgcagggggagtggatggtcgcctctgagatg
tatcatccgcataccgggcggccgttgacctttgccgaacaaaaagaggttcatatcaat
cagcggctggaacagcgtctgccgatgaccctattcgtgattgatgtggcgtcggggatg
cgcagggatgttcatcacgccaccgactggcttaaccatttacagttttctcccgccgat
cccaaccagattctgttctgtcacgaggggccgtggcataaggtggatcgcatctggaca
attcgtaccgatggttcggcgttgaccaaaatccacacgcgcgccatgaatatggaaatt
gccgggcatgaatttttcagcgccgacggcaacacgatatggtatgacctgcaaacgccg
cgcggcgaggtgttctggctggcgggctatgagctgcatagcggcaggcgtcagtggtat
gcgctggatcgcgatagctggtcggtacattttaatatttcctatgatggtaaatatttt
gccggcgatggcggcgatgaggagatggtggcgcacgctaaaaacggcaagtggatttca
ttgtttgtaccggaagcgataccggatgtcgccggcatttccgccgctaatgcggatagc
ttaatcgctccgggcgtactgcgccgccagcggctggtggatatgtccgctcatgattac
cgtctggagcctaacctcgcttttacgccggacggcaactatctggtattccgttccaat
atgcatggcgaggttcatacctatgcggtagcgcttaatgaagcgaattgccgccggtaa
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