Brenneria izadpanahii: HC231_19610
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Entry
HC231_19610 CDS
T07407
Name
(GenBank) rhamnogalacturonate lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
biz
Brenneria izadpanahii
Brite
KEGG Orthology (KO) [BR:
biz00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
HC231_19610
Enzymes [BR:
biz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
HC231_19610
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Gene cluster
GFIT
Motif
Pfam:
CBM-like
fn3_3
CarboxypepD_reg
Rhamnogal_lyase
EMC7_beta-sandw
Y_Y_Y
Ig-like_KY
CarbopepD_reg_2
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
QTF10887
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Position
complement(4394495..4396174)
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AA seq
559 aa
AA seq
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MLAPYGNCADVSPVSLTVSGMKTTLDNGLVKVEFKEDGSAASIIKDGENIVSNLSGAARD
PSKTRSAYLDYYVKGVKDFTPERVEVISNSRDMAHVAYIDDKDGLLRLEYHLIIRKGISG
IYSYVVAENAGNENVTVSELRNVYRFDPARLDHLYNGIRQGQPLLYGQLEQLSKVQDETW
RLPNGEVYSKYDFAGYMRSTPFWGVFGHGVGAWLIHASQEYFSGDALKQDLLVHQDAIIL
NYMTGAHFGTPDMVVQPGWKKFYGPWLLYINQGDTRQMIDDAWSRSVTEKASWPYRWVDD
ARYPAKRAQVEGRVLGKQPVTVVLSSSPDEPFDLQTRGYVFQGITDREGRFSIGNVSPGE
YQLTVYANSGTQPGVLAQQTVAVNGESRQLPDIALPEAGPVIWAIGQADRQAREFHFGNE
ARNYHWQNEVPANLTFDIGRSDYQRDWYYAQTKPGKWDIRFAMQPENKTYFLNISLAAAS
NGSMSNPTAPELAVTVNGKTIQALKYDNDKAIYRGALQSGRYHLARVPITPNLLKKCNNI
VSLELKGGSFMYDVVTLSE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atcttggctccttatggtaattgtgctgatgtttcccctgtttcattaactgtttccgga
atgaaaaccacgctggataatgggttggttaaggttgaatttaaagaggacggcagcgcc
gcaagtattataaaagacggggaaaatatcgtatccaacctttccggggcggcgagagat
cccagtaagacgcgtagcgcttatctggattattacgttaaaggcgtaaaagatttcacc
ccggaacgcgtcgaagttatcagcaatagccgtgatatggcgcatgtcgcctatatcgat
gataaagatggtttattgcggcttgaatatcatctgattattcgtaaaggcattagcggt
atttatagttacgtggtggccgagaatgccggaaatgaaaacgtcacggttagtgaatta
cgtaacgtataccggttcgatcccgcgcggcttgaccatctatataacggtattcgtcaa
ggacaaccattgctttacggccagcttgaacaattatcgaaagtgcaggatgaaacctgg
cgtttgccgaatggcgaggtgtattccaaatatgactttgccggttatatgcgttcgacg
cctttctggggggtattcggtcacggcgtcggcgcctggttgattcacgctagtcaggag
tatttttccggcgatgcgcttaagcaggatctcctggtacaccaggatgccatcattctg
aactatatgaccggcgctcatttcggcacgccggatatggtcgtccagcccggatggaaa
aaattctatggcccctggttgctgtatatcaatcagggcgatacgcggcagatgattgac
gatgcctggagccgttcggttactgaaaaagcctcctggccttatcgctgggtggatgac
gcgcgttatcctgcgaagcgcgctcaggtggaggggcgggtactcggcaagcagcctgtt
accgtcgtgctttcctcatcgccggacgagccttttgatctccagacgcgcggttatgtt
ttccaggggataacggacagagagggccggttcagcatcgggaacgtcagtccgggggaa
tatcaattgacggtttatgccaatagcggtacgcaacccggcgtattggcgcagcaaacc
gtcgccgttaacggggaaagccggcaactccccgatattgctcttcctgaagccgggccg
gttatctgggcgattggacaggccgatcgtcaggcccgcgaatttcatttcggcaatgaa
gcgcgtaattatcattggcagaatgaggttcccgccaatctgactttcgatatcggccgc
agcgattatcaacgggactggtattacgcgcaaaccaagccgggaaaatgggatattcgc
tttgccatgcaaccggaaaataaaacttattttctgaatatttccctggcggcggccagt
aacggatcgatgagtaatccgaccgcgcctgaattagcggtgacggttaacggaaaaacc
atacaagccctgaaatatgataacgacaaggctatctaccgcggcgcgttacaaagcggc
cgttatcatttagcccgcgtgccgatcacgcccaacctattgaaaaaatgtaataatatc
gtctctcttgaattgaaaggcggcagctttatgtatgacgtcgtcacattaagcgaatag
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