Brenneria izadpanahii: HC231_21980
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Entry
HC231_21980 CDS
T07407
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
biz
Brenneria izadpanahii
Pathway
biz02020
Two-component system
biz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
biz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HC231_21980 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HC231_21980 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
biz03021
]
HC231_21980 (rpoN)
Transcription machinery [BR:
biz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HC231_21980 (rpoN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
QTF10294
UniProt:
A0ABX7V3H4
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All DBs
Position
4907199..4908632
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AA seq
477 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDNHEEIESFE
TTDSDSLDTGEALEQKDMPEELPLDATWDEIYSAGTPSGTGTDYRDEELPIYQGETTQTL
QDYLMWQVELTPFSDTDAAIATSIVDAVDNTGYLTVPLEDILDSIGDENVTLDEVEAVLK
RVQRFDPVGVAARDLRDCLLVQLSQFADDTPRLAEARLIVSDYLDLLANHDFRSLIRTTR
LKEEVLKEALALIQSLDPRPGQSINTGESEYVIPDVLVRKIHGRWVVELNTDSIPRLQIN
QQYAALGNSVRSDSDGQFIRSHLQEARWLIKSLESRNDTLLKVTRCIVEQQQEFFDQGEE
FMKPMVLADIAQVVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVNTDNGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTTLLSEQGIIVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaggcttagccagcaactggccatgactccacagctacag
caggcaatccgtctgttgcagttgtccacgcttgaactgcaacaagagattcaactggcg
ctggaaagcaatccgttacttgagcaaacggataatcacgaagaaatagagtcatttgaa
accacagacagcgattcactggataccggtgaggcgcttgaacaaaaagatatgccggaa
gagttgccgcttgacgcgacctgggacgagatctattccgcaggcacgccatccggcacc
ggcaccgattatcgcgatgaggaattgccgatctaccagggggaaactacccaaaccctg
caggattacctgatgtggcaggtcgaactaacgcctttttccgataccgatgccgccata
gcgacgtccatcgtcgatgccgtggacaacacgggttatctcaccgtgccgctggaagat
attctcgacagcatcggcgacgaaaacgtcacgctggatgaggttgaagcggtgctgaaa
cgggttcagcgttttgatcccgtcggcgttgcggctcgcgatctgcgcgactgtctgctg
gttcagctttcccagttcgcggacgataccccgcgcctggcggaagcccgattgattgtc
agcgattatctcgacctgctggcgaatcatgatttccgcagtttgatccgcaccacccgg
ctgaaagaagaggtgctgaaagaggcgctggcgctgattcaatccctcgatccccgtccg
ggccagtcaatcaataccggcgaatcggaatatgttatcccagacgttctggtgcggaag
attcatggccgctgggtggtggagttaaataccgacagcatcccccggctgcagattaat
cagcaatatgccgcgctgggcaacagcgtgcgcagcgacagcgacggtcagtttatccgt
agccatttacaggaagcccgctggttaataaagagtttggaaagccgtaatgatacgctg
ctcaaagtcacccgctgcatcgtcgaacagcagcaggaattctttgatcagggcgaggaa
ttcatgaaaccgatggtcctggcggatattgcccaggtcgttgatatgcacgaatccacg
atttcccgtgtgacgacgcagaagtttctgcacagtccgcgcggcatttttgaactaaaa
tacttcttctccagtcacgtgaataccgacaatggaggtgaagcctcctcaacggcgatc
cgggcgctggtcaagaagctgatcgctgcggaaaaccccgccaaaccgttaagcgacagc
aaactcaccacgctgctctccgagcagggaattattgtggcgcgccgtaccgtcgctaaa
tatcgagagtctttatctatcccaccatcaaatcagcgtaaacagctggtttga
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