Brenneria izadpanahii: HC231_22980
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Entry
HC231_22980 CDS
T07407
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
biz
Brenneria izadpanahii
Pathway
biz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
biz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HC231_22980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
biz02000
]
HC231_22980
Transporters [BR:
biz02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HC231_22980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
OpuAC
Motif
Other DBs
NCBI-ProteinID:
QTF10463
LinkDB
All DBs
Position
complement(5136021..5137583)
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AA seq
520 aa
AA seq
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MKITTTAVSLFRPALIAAAIAISITPALAAVPKDMLVIGKAADPQTLDPAVTIDNNDWTV
TYPAYQRLVQYKTENGKGSTEVEGDLAESWQASDDQKVWTFKLRNDAKFSDGAPVTAEAV
KFSFERLLKIGQGPSEAYPKDLSVEVVDPYTVRFTLSTPFAPFLYTLANDGAAIVNPAVM
KEHGADDAKGWLAENTAGSGPYMLQRWQKGQQLVLVPNPHYHGAKPAFKRVSVKIIGESA
SRRLQLSRGDIDIAESLPVDQLAALKKEGAVAIDEYPSLRVTYLYLNNGKAPMNQVDLRR
AVSWSTDYQGMVNGILGGNGKQMRGPIPEGMWGYDAQAMQYSLDPAQAKAAYDKVAEKPQ
SLTFLYSDSDPNWEPIAISTQASLKNLGLNVRLEKLANATMRDRVGKGDYDIAIGNWSPD
FADPYMFMNYWFESDKKGLPGNRSFYDNKTVDDLLKKAVATSDQAERTKDYQAAQKIVID
EAAYVYLFQKNYQVAMNKEVKGFVYNPMLEQVFNVATMSK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaagataactaccaccgcagtttcattgtttcggccggcgttgatcgccgcggcgatc
gccataagcattacgccagctctggcggcggtgccgaaagatatgttggtgattggcaaa
gccgccgatccgcagacgctcgatccggccgttaccatcgataataacgactggacggtc
acttatcccgcctatcagcgcctggtgcagtataaaacggaaaatggcaaaggctccacg
gaggtggaaggcgatttggcggaaagctggcaggcttccgacgatcagaaagtctggact
tttaagctgagaaacgacgctaaattttccgatggcgcgccggtcacggcggaggcggtc
aaattctcgtttgaacgtctgctgaagattgggcaaggaccatcggaggcctatccgaag
gacttaagcgtcgaggtggttgatccctataccgtacgtttcacgcttagcacgccgttt
gcgccgttcctgtatacgctggccaatgatggcgccgcgatcgtcaatcccgcggtgatg
aaagagcacggcgccgatgacgccaaaggctggctggcggagaacaccgccggttccggc
ccttacatgttgcagcgctggcagaaagggcagcagctggtgctggttcccaacccgcac
tatcacggcgcgaaaccggcctttaaacgcgtctccgtgaagatcatcggcgagagcgcg
tcccgccgtttacagctctcccgcggcgatatcgatatcgccgaatccttgcccgtcgat
cagctggcggcgctgaaaaaagagggggcggtggctatcgatgaatatccgtcgctgcgc
gtgacctatctctatctcaacaacggcaaagcgccgatgaaccaggtcgatctgcggcgc
gccgtctcctggtcgaccgattatcagggcatggtaaacggcattctcggcggcaacggc
aaacagatgcgcggtccgatcccggaagggatgtggggctacgatgcgcaagccatgcag
tacagtctggatcccgcgcaagcgaaagccgcttatgacaaggttgccgagaagccgcag
agcttgacgttcctctattcggacagcgatcccaactgggagccgatcgccatttccacg
caggcgagcctcaaaaacctgggccttaacgtcaggctggagaagctggctaacgccacc
atgcgcgatcgcgtcggcaaaggggattatgacatcgccatcggcaactggagccccgac
ttcgccgatccctatatgtttatgaactactggttcgaatccgataagaaaggcctgccg
ggcaaccgttctttttatgacaacaaaaccgtcgacgatttgctgaagaaagccgttgcg
acgtcggatcaggccgagcgcaccaaagattatcaggcggcgcagaagatcgttatcgac
gaagccgcttacgtttatctgttccagaaaaattatcaggtcgcgatgaacaaagaggta
aaaggctttgtttacaacccgatgctggagcaggtgtttaacgttgcgaccatgagtaaa
taa
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